RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C BET2P20133 325 aa1.91□□□□□ -2.1
MSH6YDR097C MSB1P21339 1137 aaKnown RBP1.91□□□□□ -2.1
MSH6YDR097C NUP120P35729 1037 aa1.91□□□□□ -2.1
MSH6YDR097C YHR112CP38716 378 aa1.91□□□□□ -2.1
MSH6YDR097C LNP1P38878 278 aa1.91□□□□□ -2.1
MSH6YDR097C CAB2P40506 365 aa1.91□□□□□ -2.1
MSH6YDR097C MMM1P41800 426 aa1.91□□□□□ -2.1
MSH6YDR097C YJL055WP47044 245 aa1.91□□□□□ -2.1
MSH6YDR097C PSP1P50896 841 aaKnown RBP1.91□□□□□ -2.1
MSH6YDR097C DSD1P53095 428 aa1.91□□□□□ -2.1
MSH6YDR097C MUB1Q03162 620 aa1.91□□□□□ -2.1
MSH6YDR097C SXM1Q04175 944 aaKnown RBP1.91□□□□□ -2.1
MSH6YDR097C VID22Q05934 901 aa1.91□□□□□ -2.1
MSH6YDR097C THI22Q06490 572 aa1.91□□□□□ -2.1
MSH6YDR097C PUF3Q07807 879 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
MSH6YDR097C YLR122CQ12312 125 aa1.91□□□□□ -2.1
MSH6YDR097C TRP4P07285 380 aaPredicted RBP1.9□□□□□ -2.1
MSH6YDR097C KRS1P15180 591 aaKnown RBP1.9□□□□□ -2.1
MSH6YDR097C SEC21P32074 935 aaKnown RBP1.9□□□□□ -2.1
MSH6YDR097C COQ2P32378 372 aa1.9□□□□□ -2.1
MSH6YDR097C PEX5P35056 612 aa1.9□□□□□ -2.1
MSH6YDR097C RMA1P36001 430 aaKnown RBP1.9□□□□□ -2.1
MSH6YDR097C CST26P38226 397 aa1.9□□□□□ -2.1
MSH6YDR097C YBR053CP38235 358 aa1.9□□□□□ -2.1
MSH6YDR097C ARP1P38696 384 aa1.9□□□□□ -2.1
MSH6YDR097C LRP1P38801 184 aaKnown RBP1.9□□□□□ -2.1
MSH6YDR097C GSM1P42950 618 aa1.9□□□□□ -2.1
MSH6YDR097C LOC1P43586 204 aaPredicted RBP1.9□□□□□ -2.1
MSH6YDR097C ARC1P46672 376 aaKnown RBP1.9□□□□□ -2.1
MSH6YDR097C NOP9P47077 666 aaKnown RBP1.9□□□□□ -2.1
MSH6YDR097C AAD10P47182 288 aa1.9□□□□□ -2.1
MSH6YDR097C PRP31P49704 494 aaPredicted RBP1.9□□□□□ -2.1
MSH6YDR097C INP52P50942 1183 aa1.9□□□□□ -2.1
MSH6YDR097C PIL1P53252 339 aaKnown RBP1.9□□□□□ -2.1
MSH6YDR097C SNF12P53628 566 aa1.9□□□□□ -2.1
MSH6YDR097C RCM1P53972 490 aa1.9□□□□□ -2.1
MSH6YDR097C ATG21Q02887 496 aa1.9□□□□□ -2.1
MSH6YDR097C PRS5Q12265 496 aaKnown RBP1.9□□□□□ -2.1
MSH6YDR097C HRP1Q99383 534 aaKnown RBP1.9□□□□□ -2.1
MSH6YDR097C YLR415CO13578 112 aa1.9□□□□□ -2.11
MSH6YDR097C KIN2P13186 1147 aaKnown RBP1.9□□□□□ -2.11
MSH6YDR097C PCT1P13259 424 aa1.9□□□□□ -2.11
MSH6YDR097C EST1P17214 699 aaPredicted RBP1.9□□□□□ -2.11
MSH6YDR097C CLC1P17891 233 aa1.9□□□□□ -2.11
MSH6YDR097C SRP54P20424 541 aaKnown RBP1.9□□□□□ -2.11
MSH6YDR097C PRE8P23639 250 aa1.9□□□□□ -2.11
MSH6YDR097C PEX1P24004 1043 aa1.9□□□□□ -2.11
MSH6YDR097C DHR2P36009 735 aaPredicted RBP1.9□□□□□ -2.11
MSH6YDR097C UBP11P36026 717 aa1.9□□□□□ -2.11
MSH6YDR097C PIM1P36775 1133 aa1.9□□□□□ -2.11
MSH6YDR097C SRO77P38163 1010 aa1.9□□□□□ -2.11
MSH6YDR097C REG2P38232 338 aa1.9□□□□□ -2.11
MSH6YDR097C TOS1P38288 455 aa1.9□□□□□ -2.11
MSH6YDR097C EHT1P38295 451 aa1.9□□□□□ -2.11
MSH6YDR097C YBR259WP38338 688 aa1.9□□□□□ -2.11
MSH6YDR097C MSS4P38994 779 aa1.9□□□□□ -2.11
MSH6YDR097C MPT5P39016 859 aaKnown RBP RIP-Chip data1.9□□□□□ -2.11not detected
MSH6YDR097C CCT6P39079 546 aa1.9□□□□□ -2.11
MSH6YDR097C CIR1P42940 261 aa1.9□□□□□ -2.11
MSH6YDR097C YFR016CP43597 1233 aaKnown RBP1.9□□□□□ -2.11
MSH6YDR097C COG1P53079 417 aa1.9□□□□□ -2.11
MSH6YDR097C TIM50Q02776 476 aa1.9□□□□□ -2.11
MSH6YDR097C GSF2Q04697 403 aaKnown RBP1.9□□□□□ -2.11
MSH6YDR097C RGC1Q06108 1083 aaKnown RBP1.9□□□□□ -2.11
MSH6YDR097C THI72Q08579 599 aa1.9□□□□□ -2.11
MSH6YDR097C TRM11Q12463 433 aa1.9□□□□□ -2.11
MSH6YDR097C SKS1Q12505 502 aa1.9□□□□□ -2.11
MSH6YDR097C YBR255C-AQ3E776 120 aa1.9□□□□□ -2.11
MSH6YDR097C YRF1-4O13559 1382 aa1.9□□□□□ -2.11
MSH6YDR097C LEU2P04173 364 aaPredicted RBP1.9□□□□□ -2.11
MSH6YDR097C MRP7P12687 371 aa1.9□□□□□ -2.11
MSH6YDR097C KAR3P17119 729 aa1.9□□□□□ -2.11
MSH6YDR097C SPO16P17122 198 aa1.9□□□□□ -2.11
MSH6YDR097C SRV2P17555 526 aaKnown RBP1.9□□□□□ -2.11
MSH6YDR097C STE11P23561 717 aa1.9□□□□□ -2.11
MSH6YDR097C MAL33P38157 468 aa1.9□□□□□ -2.11
MSH6YDR097C YNG2P38806 282 aaKnown RBP1.9□□□□□ -2.11
MSH6YDR097C GET2P40056 285 aa1.9□□□□□ -2.11
MSH6YDR097C SKP2P42843 763 aa1.9□□□□□ -2.11
MSH6YDR097C ROK1P45818 564 aaPredicted RBP1.9□□□□□ -2.11
MSH6YDR097C MPP10P47083 593 aaKnown RBP1.9□□□□□ -2.11
MSH6YDR097C FHN1P53279 174 aa1.9□□□□□ -2.11
MSH6YDR097C EAF7P53911 425 aaKnown RBP1.9□□□□□ -2.11
MSH6YDR097C VPS9P54787 451 aa1.9□□□□□ -2.11
MSH6YDR097C REC102Q02721 264 aa1.9□□□□□ -2.11
MSH6YDR097C RAD30Q04049 632 aa1.9□□□□□ -2.11
MSH6YDR097C ATG23Q06671 453 aa1.9□□□□□ -2.11
MSH6YDR097C RTT109Q07794 436 aa1.9□□□□□ -2.11
MSH6YDR097C PSK2Q08217 1101 aa1.9□□□□□ -2.11
MSH6YDR097C SWM1Q12379 170 aa1.9□□□□□ -2.11
MSH6YDR097C YBR126W-AQ8TGU7 68 aa1.9□□□□□ -2.11
MSH6YDR097C TRX1P22217 103 aaKnown RBP1.89□□□□□ -2.11
MSH6YDR097C YSP3P25036 478 aa1.89□□□□□ -2.11
MSH6YDR097C SED4P25365 1065 aa1.89□□□□□ -2.11
MSH6YDR097C RSC6P25632 483 aa1.89□□□□□ -2.11
MSH6YDR097C GPI10P30777 616 aa1.89□□□□□ -2.11
MSH6YDR097C YBL029WP38201 376 aa1.89□□□□□ -2.11
MSH6YDR097C YHR078WP38799 552 aa1.89□□□□□ -2.11
MSH6YDR097C SFB3P38810 929 aa1.89□□□□□ -2.11
MSH6YDR097C UTP9P38882 575 aaKnown RBP1.89□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms