RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	LTP1	P40347	161 aa		6	□□□□□ -1.45
SNF11	YDR073W	FKH2	P41813	862 aa		6	□□□□□ -1.45
SNF11	YDR073W	SGF73	P53165	657 aa		6	□□□□□ -1.45
SNF11	YDR073W	SLU7	Q02775	382 aa	Known RBP	6	□□□□□ -1.45
SNF11	YDR073W	AIM32	Q04689	311 aa		6	□□□□□ -1.45
SNF11	YDR073W	CRF1	Q04930	467 aa		6	□□□□□ -1.45
SNF11	YDR073W	RXT3	Q07458	294 aa		6	□□□□□ -1.45
SNF11	YDR073W	NOP12	Q08208	459 aa	Known RBP	6	□□□□□ -1.45
SNF11	YDR073W	TCO89	Q08921	799 aa		6	□□□□□ -1.45
SNF11	YDR073W	PGC1	Q08959	321 aa		6	□□□□□ -1.45
SNF11	YDR073W	RIM20	Q12033	661 aa		6	□□□□□ -1.45
SNF11	YDR073W	PAR32	Q12515	295 aa	Known RBP	6	□□□□□ -1.45
SNF11	YDR073W	POL4	P25615	582 aa		5.99	□□□□□ -1.45
SNF11	YDR073W	ADK2	P26364	225 aa		5.99	□□□□□ -1.45
SNF11	YDR073W	BCS1	P32839	456 aa		5.99	□□□□□ -1.45
SNF11	YDR073W	APE3	P37302	537 aa	Known RBP	5.99	□□□□□ -1.45
SNF11	YDR073W	POP2	P39008	433 aa		5.99	□□□□□ -1.45
SNF11	YDR073W	NUP60	P39705	539 aa		5.99	□□□□□ -1.45
SNF11	YDR073W	GDI1	P39958	451 aa	Known RBP	5.99	□□□□□ -1.45
SNF11	YDR073W	JHD1	P40034	492 aa		5.99	□□□□□ -1.45
SNF11	YDR073W	RGI2	P40188	164 aa		5.99	□□□□□ -1.45
SNF11	YDR073W	YGR054W	P53235	642 aa	Known RBP	5.99	□□□□□ -1.45
SNF11	YDR073W	NGL2	Q03264	515 aa	Known RBP	5.99	□□□□□ -1.45
SNF11	YDR073W	YAP6	Q03935	383 aa		5.99	□□□□□ -1.45
SNF11	YDR073W	YLR345W	Q06137	509 aa		5.99	□□□□□ -1.45
SNF11	YDR073W	SKG3	Q06315	1026 aa		5.99	□□□□□ -1.45
SNF11	YDR073W	ARR3	Q06598	404 aa		5.99	□□□□□ -1.45
SNF11	YDR073W	SMF3	Q12078	473 aa	Predicted RBP	5.99	□□□□□ -1.45
SNF11	YDR073W	SWT1	Q12104	458 aa		5.99	□□□□□ -1.45
SNF11	YDR073W	GRX6	Q12438	231 aa		5.99	□□□□□ -1.45
SNF11	YDR073W	YRF1-4	O13559	1382 aa		5.98	□□□□□ -1.45
SNF11	YDR073W	LAT1	P12695	482 aa	Known RBP	5.98	□□□□□ -1.45
SNF11	YDR073W	STE50	P25344	346 aa		5.98	□□□□□ -1.45
SNF11	YDR073W	CAP1	P28495	268 aa	Known RBP	5.98	□□□□□ -1.45
SNF11	YDR073W	NTH1	P32356	751 aa		5.98	□□□□□ -1.45
SNF11	YDR073W	GCS1	P35197	352 aa		5.98	□□□□□ -1.45
SNF11	YDR073W	STB6	P36085	766 aa		5.98	□□□□□ -1.45
SNF11	YDR073W	MAL33	P38157	468 aa		5.98	□□□□□ -1.45
SNF11	YDR073W	FMO1	P38866	432 aa		5.98	□□□□□ -1.45
SNF11	YDR073W	YEL057C	P39983	233 aa		5.98	□□□□□ -1.45
SNF11	YDR073W	SEC28	P40509	296 aa	Known RBP	5.98	□□□□□ -1.45
SNF11	YDR073W	YJL055W	P47044	245 aa		5.98	□□□□□ -1.45
SNF11	YDR073W	RFX1	P48743	811 aa		5.98	□□□□□ -1.45
SNF11	YDR073W	VPS62	P53285	467 aa		5.98	□□□□□ -1.45
SNF11	YDR073W	ERB1	Q04660	807 aa	Known RBP	5.98	□□□□□ -1.45
SNF11	YDR073W	CHS5	Q12114	671 aa	Known RBP	5.98	□□□□□ -1.45
SNF11	YDR073W	KAR3	P17119	729 aa		5.97	□□□□□ -1.45
SNF11	YDR073W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.97	□□□□□ -1.45	not detected
SNF11	YDR073W	REC107	P21651	314 aa		5.97	□□□□□ -1.45
SNF11	YDR073W	PRP28	P23394	588 aa		5.97	□□□□□ -1.45
SNF11	YDR073W	YCR061W	P25639	631 aa		5.97	□□□□□ -1.45
SNF11	YDR073W	URK1	P27515	501 aa		5.97	□□□□□ -1.45
SNF11	YDR073W	CDC15	P27636	974 aa		5.97	□□□□□ -1.45
SNF11	YDR073W	MVD1	P32377	396 aa	Known RBP	5.97	□□□□□ -1.45
SNF11	YDR073W	RPN2	P32565	945 aa	Known RBP	5.97	□□□□□ -1.45
SNF11	YDR073W	UBP13	P38187	747 aa		5.97	□□□□□ -1.45
SNF11	YDR073W	SMF1	P38925	575 aa		5.97	□□□□□ -1.45
SNF11	YDR073W	PES4	P39684	611 aa		5.97	□□□□□ -1.45
SNF11	YDR073W	MET18	P40469	1032 aa		5.97	□□□□□ -1.45
SNF11	YDR073W	DOT5	P40553	215 aa		5.97	□□□□□ -1.45
SNF11	YDR073W	YIR042C	P40586	236 aa		5.97	□□□□□ -1.45
SNF11	YDR073W	LCB2	P40970	561 aa		5.97	□□□□□ -1.45
SNF11	YDR073W	YGR066C	P53242	292 aa		5.97	□□□□□ -1.45
SNF11	YDR073W	PIL1	P53252	339 aa	Known RBP	5.97	□□□□□ -1.45
SNF11	YDR073W	INN1	P53901	409 aa		5.97	□□□□□ -1.45
SNF11	YDR073W	PEX25	Q02969	394 aa		5.97	□□□□□ -1.45
SNF11	YDR073W	GYL1	Q04322	720 aa		5.97	□□□□□ -1.45
SNF11	YDR073W	PDH1	Q12428	516 aa	Known RBP	5.97	□□□□□ -1.45
SNF11	YDR073W	YJR112W-A	Q3E743	109 aa		5.97	□□□□□ -1.45
SNF11	YDR073W	CPA2	P03965	1118 aa	Known RBP	5.96	□□□□□ -1.46
SNF11	YDR073W	CDC6	P09119	513 aa		5.96	□□□□□ -1.46
SNF11	YDR073W	KAR4	P25583	335 aa		5.96	□□□□□ -1.46
SNF11	YDR073W	KES1	P35844	434 aa	Known RBP	5.96	□□□□□ -1.46
SNF11	YDR073W	AUR1	P36107	401 aa	Predicted RBP	5.96	□□□□□ -1.46
SNF11	YDR073W	LNP1	P38878	278 aa		5.96	□□□□□ -1.46
SNF11	YDR073W	BAP3	P41815	604 aa		5.96	□□□□□ -1.46
SNF11	YDR073W	IME4	P41833	600 aa		5.96	□□□□□ -1.46
SNF11	YDR073W	GPI8	P49018	411 aa		5.96	□□□□□ -1.46
SNF11	YDR073W	AMA1	P50082	593 aa		5.96	□□□□□ -1.46
SNF11	YDR073W	LCL3	P53153	274 aa		5.96	□□□□□ -1.46
SNF11	YDR073W	YML037C	Q03703	340 aa		5.96	□□□□□ -1.46
SNF11	YDR073W	YOL159C-A	Q3E769	90 aa		5.96	□□□□□ -1.46
SNF11	YDR073W	YOR019W	Q99248	730 aa		5.96	□□□□□ -1.46
SNF11	YDR073W	PDE1	P22434	369 aa		5.95	□□□□□ -1.46
SNF11	YDR073W	CLB1	P24868	471 aa		5.95	□□□□□ -1.46
SNF11	YDR073W	PLB1	P39105	664 aa		5.95	□□□□□ -1.46
SNF11	YDR073W	YJL206C	P39529	758 aa		5.95	□□□□□ -1.46
SNF11	YDR073W	MEF2	P39677	819 aa		5.95	□□□□□ -1.46
SNF11	YDR073W	AFG3	P39925	761 aa		5.95	□□□□□ -1.46
SNF11	YDR073W	ROK1	P45818	564 aa	Predicted RBP	5.95	□□□□□ -1.46
SNF11	YDR073W	JJJ1	P53863	590 aa		5.95	□□□□□ -1.46
SNF11	YDR073W	YDR341C	Q05506	607 aa	Known RBP	5.95	□□□□□ -1.46
SNF11	YDR073W	ECM22	Q05958	814 aa	Predicted RBP	5.95	□□□□□ -1.46
SNF11	YDR073W	ATG23	Q06671	453 aa		5.95	□□□□□ -1.46
SNF11	YDR073W	ACK1	Q07622	623 aa	Predicted RBP	5.95	□□□□□ -1.46
SNF11	YDR073W	MCA1	Q08601	432 aa		5.95	□□□□□ -1.46
SNF11	YDR073W	YBR085C-A	O43137	85 aa		5.94	□□□□□ -1.46
SNF11	YDR073W	STF1	P01098	86 aa		5.94	□□□□□ -1.46
SNF11	YDR073W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	5.94	□□□□□ -1.46	not detected
SNF11	YDR073W	STE12	P13574	688 aa		5.94	□□□□□ -1.46

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms