RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W AI5_ALPHAQ9ZZX1 630 aa7.1□□□□□ -1.27
NUP84YDL116W SNF4P12904 322 aa7.09□□□□□ -1.27
NUP84YDL116W YCL068CP25593 260 aa7.09□□□□□ -1.27
NUP84YDL116W RIC1P40395 1056 aa7.09□□□□□ -1.27
NUP84YDL116W PEX21P50091 288 aa7.09□□□□□ -1.27
NUP84YDL116W SHE4P51534 789 aa7.09□□□□□ -1.27
NUP84YDL116W AIF1P52923 378 aa7.09□□□□□ -1.27
NUP84YDL116W ARE2P53629 642 aaKnown RBP7.09□□□□□ -1.27
NUP84YDL116W RSM24Q03976 319 aa7.09□□□□□ -1.27
NUP84YDL116W YPQ2Q06328 317 aa7.09□□□□□ -1.27
NUP84YDL116W APM4Q99186 491 aa7.09□□□□□ -1.27
NUP84YDL116W RPS3P05750 240 aaKnown RBP7.09□□□□□ -1.27
NUP84YDL116W ASP3-2P0CX77 362 aa7.09□□□□□ -1.27
NUP84YDL116W ASP3-3P0CX78 362 aa7.09□□□□□ -1.27
NUP84YDL116W ASP3-4P0CX79 362 aa7.09□□□□□ -1.27
NUP84YDL116W ASP3-1P0CZ17 362 aa7.09□□□□□ -1.27
NUP84YDL116W ABF1P14164 731 aa7.09□□□□□ -1.27
NUP84YDL116W URA10P30402 227 aa7.09□□□□□ -1.27
NUP84YDL116W RPT5P33297 434 aaKnown RBP7.09□□□□□ -1.27
NUP84YDL116W SRB2P34162 210 aa7.09□□□□□ -1.27
NUP84YDL116W SWC5P38326 303 aa7.09□□□□□ -1.27
NUP84YDL116W RIM4P38741 713 aa7.09□□□□□ -1.27
NUP84YDL116W RRT5P43607 289 aa7.09□□□□□ -1.27
NUP84YDL116W CUL3P53202 744 aa7.09□□□□□ -1.27
NUP84YDL116W MMT1Q03218 510 aa7.09□□□□□ -1.27
NUP84YDL116W YMR155WQ03795 547 aa7.09□□□□□ -1.27
NUP84YDL116W CRN1Q06440 651 aa7.09□□□□□ -1.27
NUP84YDL116W DTD1Q07648 150 aaKnown RBP7.09□□□□□ -1.27
NUP84YDL116W CBC2Q08920 208 aaKnown RBP RIP-Chip data7.09□□□□□ -1.27not detected
NUP84YDL116W TAF3Q12297 353 aa7.09□□□□□ -1.27
NUP84YDL116W GPR1Q12361 961 aa7.09□□□□□ -1.27
NUP84YDL116W RGS2Q99188 309 aa7.09□□□□□ -1.27
NUP84YDL116W RHO1P06780 209 aaKnown RBP7.08□□□□□ -1.28
NUP84YDL116W NAT1P12945 854 aaKnown RBP7.08□□□□□ -1.28
NUP84YDL116W POL30P15873 258 aaKnown RBP7.08□□□□□ -1.28
NUP84YDL116W ADE2P21264 571 aaKnown RBP7.08□□□□□ -1.28
NUP84YDL116W KAP104P38217 918 aaKnown RBP7.08□□□□□ -1.28
NUP84YDL116W NIT1P40447 199 aa7.08□□□□□ -1.28
NUP84YDL116W LAM5P43560 674 aa7.08□□□□□ -1.28
NUP84YDL116W GUF1P46943 645 aa7.08□□□□□ -1.28
NUP84YDL116W YJL049WP47048 450 aa7.08□□□□□ -1.28
NUP84YDL116W HLJ1P48353 224 aa7.08□□□□□ -1.28
NUP84YDL116W ASN2P49090 572 aaKnown RBP7.08□□□□□ -1.28
NUP84YDL116W YGR283CP53336 341 aaPredicted RBP7.08□□□□□ -1.28
NUP84YDL116W NDL1Q06568 189 aa7.08□□□□□ -1.28
NUP84YDL116W CUE5Q08412 411 aaKnown RBP7.08□□□□□ -1.28
NUP84YDL116W ADE4P04046 510 aaKnown RBP7.08□□□□□ -1.28
NUP84YDL116W PUT2P07275 575 aa7.08□□□□□ -1.28
NUP84YDL116W IMA3P0CW40 589 aa7.08□□□□□ -1.28
NUP84YDL116W IMA4P0CW41 589 aa7.08□□□□□ -1.28
NUP84YDL116W ITR2P30606 609 aa7.08□□□□□ -1.28
NUP84YDL116W PTH2P34222 208 aa7.08□□□□□ -1.28
NUP84YDL116W YKL222CP35995 705 aa7.08□□□□□ -1.28
NUP84YDL116W HSL7P38274 827 aa7.08□□□□□ -1.28
NUP84YDL116W SAH1P39954 449 aaKnown RBP7.08□□□□□ -1.28
NUP84YDL116W ECM10P39987 644 aa7.08□□□□□ -1.28
NUP84YDL116W CAB2P40506 365 aa7.08□□□□□ -1.28
NUP84YDL116W YNL247WP53852 767 aaKnown RBP7.08□□□□□ -1.28
NUP84YDL116W TMA20P89886 181 aaPredicted RBP7.08□□□□□ -1.28
NUP84YDL116W ARP9Q05123 467 aa7.08□□□□□ -1.28
NUP84YDL116W LOT6Q07923 191 aa7.08□□□□□ -1.28
NUP84YDL116W AIM39Q08223 395 aa7.08□□□□□ -1.28
NUP84YDL116W IMA2Q08295 589 aa7.08□□□□□ -1.28
NUP84YDL116W GET4Q12125 312 aa7.08□□□□□ -1.28
NUP84YDL116W MSH5Q12175 901 aa7.08□□□□□ -1.28
NUP84YDL116W AVL9Q12500 764 aa7.08□□□□□ -1.28
NUP84YDL116W YAP1P19880 650 aaKnown RBP7.07□□□□□ -1.28
NUP84YDL116W SEC15P22224 910 aa7.07□□□□□ -1.28
NUP84YDL116W RME1P32338 300 aaKnown RBP7.07□□□□□ -1.28
NUP84YDL116W SAC1P32368 623 aaKnown RBP7.07□□□□□ -1.28
NUP84YDL116W GCD11P32481 527 aaKnown RBP7.07□□□□□ -1.28
NUP84YDL116W MRP4P32902 394 aa7.07□□□□□ -1.28
NUP84YDL116W RPT1P33299 467 aaKnown RBP7.07□□□□□ -1.28
NUP84YDL116W YBL029WP38201 376 aa7.07□□□□□ -1.28
NUP84YDL116W ATG12P38316 186 aa7.07□□□□□ -1.28
NUP84YDL116W PEX18P38855 283 aa7.07□□□□□ -1.28
NUP84YDL116W SWD1P39706 426 aa7.07□□□□□ -1.28
NUP84YDL116W AVT6P40074 448 aa7.07□□□□□ -1.28
NUP84YDL116W YRB2P40517 327 aa7.07□□□□□ -1.28
NUP84YDL116W FET4P40988 552 aa7.07□□□□□ -1.28
NUP84YDL116W SCS3P53012 380 aa7.07□□□□□ -1.28
NUP84YDL116W TIM13P53299 105 aa7.07□□□□□ -1.28
NUP84YDL116W SQS1P53866 767 aaKnown RBP7.07□□□□□ -1.28
NUP84YDL116W YNL058CP53947 316 aa7.07□□□□□ -1.28
NUP84YDL116W ORC3P54790 616 aa7.07□□□□□ -1.28
NUP84YDL116W YOL159CQ08300 171 aa7.07□□□□□ -1.28
NUP84YDL116W YPL191CQ08930 360 aa7.07□□□□□ -1.28
NUP84YDL116W ERP3Q12403 225 aa7.07□□□□□ -1.28
NUP84YDL116W PAB1P04147 577 aaKnown RBP RIP-Chip data7.06□□□□□ -1.28not detected
NUP84YDL116W HSP26P15992 214 aaKnown RBP RIP-Chip data7.06□□□□□ -1.28 RIP-Chip
NUP84YDL116W COX11P19516 300 aaKnown RBP7.06□□□□□ -1.28
NUP84YDL116W AMS1P22855 1083 aa7.06□□□□□ -1.28
NUP84YDL116W MRPL7P36519 292 aa7.06□□□□□ -1.28
NUP84YDL116W ABZ1P37254 787 aaPredicted RBP7.06□□□□□ -1.28
NUP84YDL116W MEF2P39677 819 aa7.06□□□□□ -1.28
NUP84YDL116W GEM1P39722 662 aa7.06□□□□□ -1.28
NUP84YDL116W UTP18P40362 594 aaPredicted RBP7.06□□□□□ -1.28
NUP84YDL116W ATM1P40416 690 aa7.06□□□□□ -1.28
NUP84YDL116W ULI1P43604 169 aa7.06□□□□□ -1.28
NUP84YDL116W YGL108CP53139 140 aa7.06□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 78.6 ms