RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W CBF2P32504 956 aa2.34□□□□□ -2.04
MCD1YDL003W SSE1P32589 693 aaKnown RBP2.34□□□□□ -2.04
MCD1YDL003W CNS1P33313 385 aa2.34□□□□□ -2.04
MCD1YDL003W HSM3P38348 480 aa2.34□□□□□ -2.04
MCD1YDL003W SIP3P38717 1229 aa2.34□□□□□ -2.04
MCD1YDL003W TDA11P38854 504 aa2.34□□□□□ -2.04
MCD1YDL003W YHR202WP38887 602 aa2.34□□□□□ -2.04
MCD1YDL003W ARB1P40024 610 aaKnown RBP2.34□□□□□ -2.04
MCD1YDL003W YJL049WP47048 450 aa2.34□□□□□ -2.04
MCD1YDL003W BRO1P48582 844 aa2.34□□□□□ -2.04
MCD1YDL003W HOP2P53187 214 aa2.34□□□□□ -2.04
MCD1YDL003W CIK1Q01649 594 aa2.34□□□□□ -2.04
MCD1YDL003W SPC24Q04477 213 aa2.34□□□□□ -2.04
MCD1YDL003W YDR341CQ05506 607 aaKnown RBP2.34□□□□□ -2.04
MCD1YDL003W YDL073WQ07454 984 aa2.34□□□□□ -2.04
MCD1YDL003W ABP140Q08641 628 aaKnown RBP2.34□□□□□ -2.04
MCD1YDL003W SGT2Q12118 346 aaKnown RBP2.34□□□□□ -2.04
MCD1YDL003W RPL7BQ12213 244 aaKnown RBP2.34□□□□□ -2.04
MCD1YDL003W CRC1Q12289 327 aa2.34□□□□□ -2.04
MCD1YDL003W YOL098CQ12496 1037 aa2.34□□□□□ -2.04
MCD1YDL003W YOR111WQ99210 232 aa2.34□□□□□ -2.04
MCD1YDL003W ARO1P08566 1588 aaKnown RBP2.33□□□□□ -2.04
MCD1YDL003W RTC1Q08281 1341 aa2.33□□□□□ -2.04
MCD1YDL003W IQG1Q12280 1495 aa2.33□□□□□ -2.04
MCD1YDL003W DNF2Q12675 1612 aa2.33□□□□□ -2.04
MCD1YDL003W DRS2P39524 1355 aa2.33□□□□□ -2.04
MCD1YDL003W YMR084WA2P2R3 262 aa2.33□□□□□ -2.04
MCD1YDL003W CDC8P00572 216 aa2.33□□□□□ -2.04
MCD1YDL003W CDC9P04819 755 aa2.33□□□□□ -2.04
MCD1YDL003W RPB2P08518 1224 aaKnown RBP2.33□□□□□ -2.04
MCD1YDL003W RRP43P25359 394 aaPredicted RBP2.33□□□□□ -2.04
MCD1YDL003W RAD16P31244 790 aa2.33□□□□□ -2.04
MCD1YDL003W HOG1P32485 435 aa2.33□□□□□ -2.04
MCD1YDL003W SRB4P32569 687 aa2.33□□□□□ -2.04
MCD1YDL003W NUP120P35729 1037 aa2.33□□□□□ -2.04
MCD1YDL003W AKL1P38080 1108 aaKnown RBP2.33□□□□□ -2.04
MCD1YDL003W GPD2P41911 440 aaKnown RBP2.33□□□□□ -2.04
MCD1YDL003W YJR079WP47126 109 aa2.33□□□□□ -2.04
MCD1YDL003W HOS2P53096 452 aaPredicted RBP2.33□□□□□ -2.04
MCD1YDL003W BRE5P53741 515 aaKnown RBP2.33□□□□□ -2.04
MCD1YDL003W VPS75P53853 264 aa2.33□□□□□ -2.04
MCD1YDL003W NCS2P53923 493 aaPredicted RBP2.33□□□□□ -2.04
MCD1YDL003W NOP15P53927 220 aaPredicted RBP2.33□□□□□ -2.04
MCD1YDL003W MRPL1Q04599 285 aa2.33□□□□□ -2.04
MCD1YDL003W FUS2Q05670 677 aa2.33□□□□□ -2.04
MCD1YDL003W VPS38Q05919 439 aa2.33□□□□□ -2.04
MCD1YDL003W PSK2Q08217 1101 aa2.33□□□□□ -2.04
MCD1YDL003W BUD7Q08754 746 aa2.33□□□□□ -2.04
MCD1YDL003W VIK1Q12045 647 aa2.33□□□□□ -2.04
MCD1YDL003W DDP1Q99321 188 aaKnown RBP2.33□□□□□ -2.04
MCD1YDL003W MDS3P53094 1487 aa2.33□□□□□ -2.04
MCD1YDL003W SNF2P22082 1703 aa2.32□□□□□ -2.04
MCD1YDL003W CPA2P03965 1118 aaKnown RBP2.32□□□□□ -2.04
MCD1YDL003W SSC1P0CS90 654 aaKnown RBP2.32□□□□□ -2.04
MCD1YDL003W FRS2P15625 503 aaKnown RBP2.32□□□□□ -2.04
MCD1YDL003W YAP1P19880 650 aaKnown RBP2.32□□□□□ -2.04
MCD1YDL003W ARG1P22768 420 aa2.32□□□□□ -2.04
MCD1YDL003W YCR016WP25617 290 aaKnown RBP2.32□□□□□ -2.04
MCD1YDL003W PDB1P32473 366 aaKnown RBP2.32□□□□□ -2.04
MCD1YDL003W SSO1P32867 290 aa2.32□□□□□ -2.04
MCD1YDL003W RIB7P33312 244 aa2.32□□□□□ -2.04
MCD1YDL003W SAS3P34218 831 aa2.32□□□□□ -2.04
MCD1YDL003W YKT6P36015 200 aaKnown RBP2.32□□□□□ -2.04
MCD1YDL003W MRPL40P36534 297 aa2.32□□□□□ -2.04
MCD1YDL003W OSH3P38713 996 aaKnown RBP2.32□□□□□ -2.04
MCD1YDL003W YLF2P38746 405 aa2.32□□□□□ -2.04
MCD1YDL003W PPE1P38796 400 aa2.32□□□□□ -2.04
MCD1YDL003W SPC72P39723 622 aa2.32□□□□□ -2.04
MCD1YDL003W YER130CP39959 443 aa2.32□□□□□ -2.04
MCD1YDL003W MET18P40469 1032 aa2.32□□□□□ -2.04
MCD1YDL003W SYG1P40528 902 aa2.32□□□□□ -2.04
MCD1YDL003W BIT61P47041 543 aa2.32□□□□□ -2.04
MCD1YDL003W RBL2P48606 106 aaKnown RBP2.32□□□□□ -2.04
MCD1YDL003W FMS1P50264 508 aa2.32□□□□□ -2.04
MCD1YDL003W SHE10P53075 577 aa2.32□□□□□ -2.04
MCD1YDL003W CAF130P53280 1122 aaPredicted RBP2.32□□□□□ -2.04
MCD1YDL003W SPO1P53541 631 aa2.32□□□□□ -2.04
MCD1YDL003W VTC3Q02725 835 aa2.32□□□□□ -2.04
MCD1YDL003W TFB2Q02939 513 aa2.32□□□□□ -2.04
MCD1YDL003W HCR1Q05775 265 aaKnown RBP2.32□□□□□ -2.04
MCD1YDL003W ATG26Q06321 1198 aa2.32□□□□□ -2.04
MCD1YDL003W VAM6Q07468 1049 aa2.32□□□□□ -2.04
MCD1YDL003W PSR1Q07800 427 aa2.32□□□□□ -2.04
MCD1YDL003W MSH5Q12175 901 aa2.32□□□□□ -2.04
MCD1YDL003W RUP1Q12242 671 aa2.32□□□□□ -2.04
MCD1YDL003W HER1Q12276 1246 aa2.32□□□□□ -2.04
MCD1YDL003W OCA6Q12454 224 aa2.32□□□□□ -2.04
MCD1YDL003W NOT5Q12514 560 aaPredicted RBP2.32□□□□□ -2.04
MCD1YDL003W LSO2Q3E772 92 aaKnown RBP2.32□□□□□ -2.04
MCD1YDL003W RPO31P04051 1460 aa2.32□□□□□ -2.04
MCD1YDL003W HAP1P0CE41 1502 aa2.32□□□□□ -2.04
MCD1YDL003W PDR11P40550 1411 aa2.31□□□□□ -2.04
MCD1YDL003W REP1P03871 373 aa2.31□□□□□ -2.04
MCD1YDL003W PET494P07390 489 aaPredicted RBP2.31□□□□□ -2.04
MCD1YDL003W GPA1P08539 472 aa2.31□□□□□ -2.04
MCD1YDL003W YML002WP0CF17 737 aa2.31□□□□□ -2.04
MCD1YDL003W FRS1P15624 595 aaKnown RBP2.31□□□□□ -2.04
MCD1YDL003W YEF3P16521 1044 aaKnown RBP2.31□□□□□ -2.04
MCD1YDL003W SEN2P16658 377 aa2.31□□□□□ -2.04
MCD1YDL003W PWP1P21304 576 aaKnown RBP2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms