RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 CYBAP13498 195 aa14.39□□□□□ -0.11
RTN4-211ENST00000438462 CSF2RAP15509 400 aa14.39□□□□□ -0.11
RTN4-211ENST00000438462 HDLBPQ00341 1268 aaKnown RBP14.39□□□□□ -0.11
RTN4-211ENST00000438462 PABPC4Q13310 644 aaKnown RBP eCLIP14.39□□□□□ -0.113e-6■□□□□ 8
RTN4-211ENST00000438462 KRT24Q2M2I5 525 aa14.39□□□□□ -0.11
RTN4-211ENST00000438462 APOBEC3HQ6NTF7 200 aaKnown RBP14.39□□□□□ -0.11
RTN4-211ENST00000438462 PORCNQ9H237 461 aa14.39□□□□□ -0.11
RTN4-211ENST00000438462 NUDCQ9Y266 331 aa14.39□□□□□ -0.11
RTN4-211ENST00000438462 CHD6Q8TD26 2715 aa14.39□□□□□ -0.11
RTN4-211ENST00000438462 APBB1O00213 710 aa14.38□□□□□ -0.11
RTN4-211ENST00000438462 SLC5A1P13866 664 aa14.38□□□□□ -0.11
RTN4-211ENST00000438462 ITGA6P23229 1130 aa14.38□□□□□ -0.11
RTN4-211ENST00000438462 CYP2C19P33261 490 aa14.38□□□□□ -0.11
RTN4-211ENST00000438462 MAP2K5Q13163 448 aa14.38□□□□□ -0.11
RTN4-211ENST00000438462 LRRC41Q15345 812 aa14.38□□□□□ -0.11
RTN4-211ENST00000438462 HDGFL1Q5TGJ6 251 aa14.38□□□□□ -0.11
RTN4-211ENST00000438462 PLEKHH3Q7Z736 793 aa14.38□□□□□ -0.11
RTN4-211ENST00000438462 GPRC5AQ8NFJ5 357 aa14.38□□□□□ -0.11
RTN4-211ENST00000438462 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.38□□□□□ -0.11
RTN4-211ENST00000438462 RALYQ9UKM9 306 aaKnown RBP14.38□□□□□ -0.11
RTN4-211ENST00000438462 PRR23AA6NEV1 266 aa14.37□□□□□ -0.11
RTN4-211ENST00000438462 GOLGA2Q08379 1002 aa14.37□□□□□ -0.11
RTN4-211ENST00000438462 LEXMQ3ZCV2 418 aa14.37□□□□□ -0.11
RTN4-211ENST00000438462 CCAR1Q8IX12 1150 aaKnown RBP14.37□□□□□ -0.11
RTN4-211ENST00000438462 CFAP53Q96M91 514 aa14.37□□□□□ -0.11
RTN4-211ENST00000438462 MTIF3Q9H2K0 278 aaKnown RBP14.37□□□□□ -0.11
RTN4-211ENST00000438462 UBE2ZQ9H832 354 aaPredicted RBP14.37□□□□□ -0.11
RTN4-211ENST00000438462 TRPC6Q9Y210 931 aa14.37□□□□□ -0.11
RTN4-211ENST00000438462 CNGB1Q14028 1251 aaPredicted RBP14.36□□□□□ -0.11
RTN4-211ENST00000438462 EPHA10Q5JZY3 1008 aa14.36□□□□□ -0.11
RTN4-211ENST00000438462 PTCRAQ6ISU1 281 aaPredicted RBP14.36□□□□□ -0.11
RTN4-211ENST00000438462 DGLUCYQ7Z3D6 616 aa14.36□□□□□ -0.11
RTN4-211ENST00000438462 EDC3Q96F86 508 aaKnown RBP14.36□□□□□ -0.11
RTN4-211ENST00000438462 CWC22Q9HCG8 908 aaKnown RBP14.36□□□□□ -0.11
RTN4-211ENST00000438462 ALG13Q9NP73 1137 aaKnown RBP14.36□□□□□ -0.11
RTN4-211ENST00000438462 TBX21Q9UL17 535 aa14.36□□□□□ -0.11
RTN4-211ENST00000438462 PHF24Q9UPV7 400 aa14.36□□□□□ -0.11
RTN4-211ENST00000438462 PCDHA11Q9Y5I1 949 aa14.36□□□□□ -0.11
RTN4-211ENST00000438462 TECTAO75443 2155 aa14.36□□□□□ -0.11
RTN4-211ENST00000438462 NCOR2Q9Y618 2525 aa14.35□□□□□ -0.11
RTN4-211ENST00000438462 PROB1E7EW31 1015 aa14.35□□□□□ -0.11
RTN4-211ENST00000438462 HMGCS2P54868 508 aa14.35□□□□□ -0.11
RTN4-211ENST00000438462 ATP2B2Q01814 1243 aa14.35□□□□□ -0.11
RTN4-211ENST00000438462 NFIAQ12857 509 aa14.35□□□□□ -0.11
RTN4-211ENST00000438462 ATAD5Q96QE3 1844 aa14.34□□□□□ -0.11
RTN4-211ENST00000438462 DCDC2CA8MYV0 355 aa14.34□□□□□ -0.11
RTN4-211ENST00000438462 KCNA5P22460 613 aa14.34□□□□□ -0.11
RTN4-211ENST00000438462 IRX3P78415 501 aaPredicted RBP14.34□□□□□ -0.11
RTN4-211ENST00000438462 ST3GAL2Q16842 350 aa14.34□□□□□ -0.11
RTN4-211ENST00000438462 FAM47AQ5JRC9 791 aa14.34□□□□□ -0.11
RTN4-211ENST00000438462 ANKRD33Q7Z3H0 272 aa14.34□□□□□ -0.11
RTN4-211ENST00000438462 TMEM199Q8N511 208 aa14.34□□□□□ -0.11
RTN4-211ENST00000438462 HYPKQ9NX55 129 aa14.34□□□□□ -0.11
RTN4-211ENST00000438462 LRRFIP2Q9Y608 721 aaKnown RBP14.34□□□□□ -0.11
RTN4-211ENST00000438462 NDUFB9Q9Y6M9 179 aa14.34□□□□□ -0.11
RTN4-211ENST00000438462 FAM186AA6NE01 2351 aa14.34□□□□□ -0.11
RTN4-211ENST00000438462 DMXL1Q9Y485 3027 aa14.34□□□□□ -0.11
RTN4-211ENST00000438462 ZNF536O15090 1300 aa14.34□□□□□ -0.11
RTN4-211ENST00000438462 TPRP12270 2363 aaKnown RBP14.33□□□□□ -0.11
RTN4-211ENST00000438462 A0A1W2PQ45 241 aaPredicted RBP14.33□□□□□ -0.12
RTN4-211ENST00000438462 A0A1W2PQY0 241 aa14.33□□□□□ -0.12
RTN4-211ENST00000438462 CA3P07451 260 aa14.33□□□□□ -0.12
RTN4-211ENST00000438462 ERVK-9P63128 1117 aa14.33□□□□□ -0.12
RTN4-211ENST00000438462 ERVK-24P63145 666 aa14.33□□□□□ -0.12
RTN4-211ENST00000438462 Q3C1V9 767 aa14.33□□□□□ -0.12
RTN4-211ENST00000438462 SUGP1Q8IWZ8 645 aaKnown RBP14.33□□□□□ -0.12
RTN4-211ENST00000438462 ARNTL2Q8WYA1 636 aa14.33□□□□□ -0.12
RTN4-211ENST00000438462 SEPT4O43236 478 aa14.32□□□□□ -0.12
RTN4-211ENST00000438462 SLURP2P0DP57 97 aa14.32□□□□□ -0.12
RTN4-211ENST00000438462 GYG1P46976 350 aa14.32□□□□□ -0.12
RTN4-211ENST00000438462 HERVK_113P62684 666 aa14.32□□□□□ -0.12
RTN4-211ENST00000438462 SPP2Q13103 211 aa14.32□□□□□ -0.12
RTN4-211ENST00000438462 CHAF1AQ13111 956 aaPredicted RBP14.32□□□□□ -0.12
RTN4-211ENST00000438462 GRB10Q13322 594 aa14.32□□□□□ -0.12
RTN4-211ENST00000438462 NFE2L2Q16236 605 aa14.32□□□□□ -0.12
RTN4-211ENST00000438462 OTOP2Q7RTS6 562 aa14.32□□□□□ -0.12
RTN4-211ENST00000438462 NPLOC4Q8TAT6 608 aa14.32□□□□□ -0.12
RTN4-211ENST00000438462 TOX2Q96NM4 488 aa14.32□□□□□ -0.12
RTN4-211ENST00000438462 IRF2BPLQ9H1B7 796 aa14.32□□□□□ -0.12
RTN4-211ENST00000438462 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.32□□□□□ -0.12
RTN4-211ENST00000438462 MUTYHQ9UIF7 546 aa14.32□□□□□ -0.12
RTN4-211ENST00000438462 CACNA1HO95180 2353 aa14.31□□□□□ -0.12
RTN4-211ENST00000438462 GRXCR2A6NFK2 248 aa14.31□□□□□ -0.12
RTN4-211ENST00000438462 CTNND1O60716 968 aaKnown RBP14.31□□□□□ -0.12
RTN4-211ENST00000438462 NEFMP07197 916 aa14.31□□□□□ -0.12
RTN4-211ENST00000438462 ZP2Q05996 745 aa14.31□□□□□ -0.12
RTN4-211ENST00000438462 BMP8AQ7Z5Y6 402 aa14.31□□□□□ -0.12
RTN4-211ENST00000438462 PBXIP1Q96AQ6 731 aa14.31□□□□□ -0.12
RTN4-211ENST00000438462 RMDN1Q96DB5 314 aa14.31□□□□□ -0.12
RTN4-211ENST00000438462 PAGR1Q9BTK6 254 aa14.31□□□□□ -0.12
RTN4-211ENST00000438462 PPP1R12CQ9BZL4 782 aa14.31□□□□□ -0.12
RTN4-211ENST00000438462 IL23AQ9NPF7 189 aa14.31□□□□□ -0.12
RTN4-211ENST00000438462 FAM198AQ9UFP1 575 aa14.31□□□□□ -0.12
RTN4-211ENST00000438462 ACACBO00763 2458 aa14.3□□□□□ -0.12
RTN4-211ENST00000438462 RIF1Q5UIP0 2472 aaKnown RBP14.3□□□□□ -0.12
RTN4-211ENST00000438462 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.3□□□□□ -0.12
RTN4-211ENST00000438462 PKN1Q16512 942 aa14.3□□□□□ -0.12
RTN4-211ENST00000438462 ZFPM1Q8IX07 1006 aa14.3□□□□□ -0.12
RTN4-211ENST00000438462 FSD1Q9BTV5 496 aa14.3□□□□□ -0.12
RTN4-211ENST00000438462 RBPJLQ9UBG7 517 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms