RNA–Protein interactions for RNA: ENSMUST00000145482.7

Prpf40b-212, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,308 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-212ENSMUST00000145482 Dnah17Q69Z23 4481 aa9.94□□□□□ -0.82
Prpf40b-212ENSMUST00000145482 Defb1P56386 69 aa9.94□□□□□ -0.82
Prpf40b-212ENSMUST00000145482 Wfdc3Q14AE4 130 aa9.93□□□□□ -0.82
Prpf40b-212ENSMUST00000145482 Gm21798J3QNU5 87 aa9.92□□□□□ -0.82
Prpf40b-212ENSMUST00000145482 Defb13Q8R2I4 64 aa9.92□□□□□ -0.82
Prpf40b-212ENSMUST00000145482 Gm10139O88245 57 aa9.9□□□□□ -0.83
Prpf40b-212ENSMUST00000145482 Krtap10-4Q08EG8 221 aa9.89□□□□□ -0.83
Prpf40b-212ENSMUST00000145482 Gm9918Q8BUR5 174 aa9.88□□□□□ -0.83
Prpf40b-212ENSMUST00000145482 Fras1Q80T14 4010 aa9.88□□□□□ -0.83
Prpf40b-212ENSMUST00000145482 Gm2310J3QNJ2 377 aa9.88□□□□□ -0.83
Prpf40b-212ENSMUST00000145482 PrkdcP97313 4128 aa9.88□□□□□ -0.83
Prpf40b-212ENSMUST00000145482 Defb9Q8R2I6 67 aa9.87□□□□□ -0.83
Prpf40b-212ENSMUST00000145482 Plac8Q9JI48 112 aa9.86□□□□□ -0.83
Prpf40b-212ENSMUST00000145482 Nupr2Q497P3 102 aa9.85□□□□□ -0.83
Prpf40b-212ENSMUST00000145482 Gm10999F6Q4M4 69 aa9.81□□□□□ -0.84
Prpf40b-212ENSMUST00000145482 2310050C09RikG5E8Z3 280 aa9.81□□□□□ -0.84
Prpf40b-212ENSMUST00000145482 Dnah11E9Q7N9 4488 aa9.8□□□□□ -0.84
Prpf40b-212ENSMUST00000145482 6030445D17RikE9Q8F9 148 aa9.79□□□□□ -0.84
Prpf40b-212ENSMUST00000145482 Limd2Q8BGB5 128 aa9.78□□□□□ -0.84
Prpf40b-212ENSMUST00000145482 AW011738F6S7Q2 159 aa9.77□□□□□ -0.85
Prpf40b-212ENSMUST00000145482 Q8BGJ3 129 aa9.77□□□□□ -0.85
Prpf40b-212ENSMUST00000145482 PlecQ9QXS1 4691 aaKnown RBP9.76□□□□□ -0.85
Prpf40b-212ENSMUST00000145482 Uqcr11Q9CPX8 56 aa9.74□□□□□ -0.85
Prpf40b-212ENSMUST00000145482 Dnah1E9Q8T7 4250 aa9.73□□□□□ -0.85
Prpf40b-212ENSMUST00000145482 Adm2Q7TNK8 150 aa9.73□□□□□ -0.85
Prpf40b-212ENSMUST00000145482 Defb39Q70KL3 74 aa9.72□□□□□ -0.85
Prpf40b-212ENSMUST00000145482 1600014C23RikQ9DAX4 101 aa9.71□□□□□ -0.85
Prpf40b-212ENSMUST00000145482 Gm12216A0A1W2P827 62 aa9.71□□□□□ -0.86
Prpf40b-212ENSMUST00000145482 Gm27235Q3UW50 83 aa9.69□□□□□ -0.86
Prpf40b-212ENSMUST00000145482 Dnah9B1AR51 4484 aa9.65□□□□□ -0.86
Prpf40b-212ENSMUST00000145482 Krtap10-10A0A1W2P7T6 217 aa9.64□□□□□ -0.87
Prpf40b-212ENSMUST00000145482 2310034C09RikQ9D746 214 aa9.61□□□□□ -0.87
Prpf40b-212ENSMUST00000145482 Dync2h1Q45VK7 4306 aa9.6□□□□□ -0.87
Prpf40b-212ENSMUST00000145482 Spaca4Q80ZQ0 127 aa9.59□□□□□ -0.87
Prpf40b-212ENSMUST00000145482 Gm2696A0A1W2P709 240 aa9.58□□□□□ -0.88
Prpf40b-212ENSMUST00000145482 CriptO70333 101 aa9.55□□□□□ -0.88
Prpf40b-212ENSMUST00000145482 Krtap13O88375 197 aa9.55□□□□□ -0.88
Prpf40b-212ENSMUST00000145482 Cypt15B1AXS0 87 aa9.54□□□□□ -0.88
Prpf40b-212ENSMUST00000145482 Dnah5Q8VHE6 4621 aa9.54□□□□□ -0.88
Prpf40b-212ENSMUST00000145482 Dnah7aE9Q0T8 4024 aa9.53□□□□□ -0.88
Prpf40b-212ENSMUST00000145482 Q8K1L6 76 aa9.48□□□□□ -0.89
Prpf40b-212ENSMUST00000145482 Gm3880A0A1B0GSB3 72 aa9.45□□□□□ -0.9
Prpf40b-212ENSMUST00000145482 Stard9Q80TF6 4561 aa9.44□□□□□ -0.9
Prpf40b-212ENSMUST00000145482 Znf706Q9D115 76 aaKnown RBP9.44□□□□□ -0.9
Prpf40b-212ENSMUST00000145482 Gm16253D3Z167 63 aa9.43□□□□□ -0.9
Prpf40b-212ENSMUST00000145482 Gpr15lA0A0B4J1N3 78 aa9.43□□□□□ -0.9
Prpf40b-212ENSMUST00000145482 Ryr3A2AGL3 4863 aa9.42□□□□□ -0.9
Prpf40b-212ENSMUST00000145482 Cypt14J3QPF7 87 aa9.41□□□□□ -0.9
Prpf40b-212ENSMUST00000145482 Dnah7cA0A087WR13 4024 aa9.36□□□□□ -0.91
Prpf40b-212ENSMUST00000145482 Vps13dB1ART2 4390 aa9.35□□□□□ -0.91
Prpf40b-212ENSMUST00000145482 Gm10065F6TJM2 114 aa9.33□□□□□ -0.92
Prpf40b-212ENSMUST00000145482 Krtap14O08640 167 aa9.33□□□□□ -0.92
Prpf40b-212ENSMUST00000145482 NbdyA0A0N4SUI7 68 aa9.32□□□□□ -0.92
Prpf40b-212ENSMUST00000145482 Mp68P56379 58 aa9.31□□□□□ -0.92
Prpf40b-212ENSMUST00000145482 Krtap29-1A2A5X4 342 aa9.3□□□□□ -0.92
Prpf40b-212ENSMUST00000145482 Gm20538F6Z9R1 75 aa9.16□□□□□ -0.94
Prpf40b-212ENSMUST00000145482 4930507D05RikQ8C9C9 103 aa9.16□□□□□ -0.94
Prpf40b-212ENSMUST00000145482 RetnlbQ99P86 105 aa9.16□□□□□ -0.94
Prpf40b-212ENSMUST00000145482 Hectd4E9Q2E4 4418 aa9.16□□□□□ -0.94
Prpf40b-212ENSMUST00000145482 Pla2g10Q9QXX3 151 aa9.15□□□□□ -0.95
Prpf40b-212ENSMUST00000145482 Romo1P60603 79 aa9.13□□□□□ -0.95
Prpf40b-212ENSMUST00000145482 Dnah2P0C6F1 4456 aa9.13□□□□□ -0.95
Prpf40b-212ENSMUST00000145482 Tnp2P11378 117 aa9.1□□□□□ -0.95
Prpf40b-212ENSMUST00000145482 2310079G19RikQ9D6L6 185 aa9.1□□□□□ -0.95
Prpf40b-212ENSMUST00000145482 ApobE9Q414 4505 aa9.09□□□□□ -0.95
Prpf40b-212ENSMUST00000145482 Lrp1bQ9JI18 4599 aa9.09□□□□□ -0.95
Prpf40b-212ENSMUST00000145482 Fat1A0A1L1SQU7 4645 aa9.08□□□□□ -0.96
Prpf40b-212ENSMUST00000145482 Gm20537G3UYK7 97 aa9.08□□□□□ -0.96
Prpf40b-212ENSMUST00000145482 Dync1h1Q9JHU4 4644 aaKnown RBP9.07□□□□□ -0.96
Prpf40b-212ENSMUST00000145482 Pkd1O08852 4293 aa9.06□□□□□ -0.96
Prpf40b-212ENSMUST00000145482 Gm4491E0CX42 125 aa9.03□□□□□ -0.96
Prpf40b-212ENSMUST00000145482 D6Ertd527eA0A0N4SWI3 464 aa9.01□□□□□ -0.97
Prpf40b-212ENSMUST00000145482 Ryr1E9PZQ0 5035 aa9.01□□□□□ -0.97
Prpf40b-212ENSMUST00000145482 Ryr2E9Q401 4966 aaKnown RBP9□□□□□ -0.97
Prpf40b-212ENSMUST00000145482 Vps13bQ80TY5 3993 aa8.89□□□□□ -0.99
Prpf40b-212ENSMUST00000145482 Prm2P07978 107 aa8.85□□□□□ -0.99
Prpf40b-212ENSMUST00000145482 Lrp1Q91ZX7 4545 aaKnown RBP8.85□□□□□ -0.99
Prpf40b-212ENSMUST00000145482 Krtap3-2Q9D638 99 aa8.84□□□□□ -0.99
Prpf40b-212ENSMUST00000145482 Krtap3-3Q9D7P0 99 aa8.84□□□□□ -0.99
Prpf40b-212ENSMUST00000145482 SacsQ9JLC8 4582 aa8.82□□□□□ -1
Prpf40b-212ENSMUST00000145482 Pkhd1E9PZ36 4059 aa8.78□□□□□ -1
Prpf40b-212ENSMUST00000145482 Gm17606F6ZL36 78 aa8.75□□□□□ -1.01
Prpf40b-212ENSMUST00000145482 Kmt2cQ8BRH4 4903 aa8.74□□□□□ -1.01
Prpf40b-212ENSMUST00000145482 Gm10382Q3V0T5 144 aa8.73□□□□□ -1.01
Prpf40b-212ENSMUST00000145482 Cox6b2Q80ZN9 88 aa8.72□□□□□ -1.01
Prpf40b-212ENSMUST00000145482 A930033H14RikG5E8X6 103 aa8.71□□□□□ -1.01
Prpf40b-212ENSMUST00000145482 Rnase13Q5GAM7 153 aa8.71□□□□□ -1.01
Prpf40b-212ENSMUST00000145482 Fat2Q5F226 4351 aa8.71□□□□□ -1.02
Prpf40b-212ENSMUST00000145482 Ndufaf8A2AMZ4 74 aa8.7□□□□□ -1.02
Prpf40b-212ENSMUST00000145482 Abca13Q5SSE9 5034 aa8.69□□□□□ -1.02
Prpf40b-212ENSMUST00000145482 Krtap19-5O08632 62 aa8.67□□□□□ -1.02
Prpf40b-212ENSMUST00000145482 Gm9736A0A1W2P7N1 277 aa8.65□□□□□ -1.02
Prpf40b-212ENSMUST00000145482 Gm9955Q8CEJ8 102 aa8.65□□□□□ -1.02
Prpf40b-212ENSMUST00000145482 Kiaa1109A2AAE1 5005 aa8.61□□□□□ -1.03
Prpf40b-212ENSMUST00000145482 Rpl37Q9D823 97 aa8.6□□□□□ -1.03
Prpf40b-212ENSMUST00000145482 Herc2Q4U2R1 4836 aa8.6□□□□□ -1.03
Prpf40b-212ENSMUST00000145482 Fat3Q8BNA6 4555 aa8.56□□□□□ -1.04
Prpf40b-212ENSMUST00000145482 Gm11939A2A592 99 aa8.56□□□□□ -1.04
Prpf40b-212ENSMUST00000145482 Mycbp2Q7TPH6 4711 aa8.54□□□□□ -1.04
Prpf40b-212ENSMUST00000145482 Gm21887J3QQ04 176 aa8.54□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 50.2 ms