RNA–Protein interactions for RNA: ENSMUST00000112577.7

Pkp4-203, Transcript of Plakophilin-4, mousemouse

TSL 5 BASIC

Gene Pkp4, Length 4,222 nt, Biotype protein coding, Subcellular localisation Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4-203ENSMUST00000112577 Gm16253D3Z167 63 aa5.26□□□□□ -1.57
Pkp4-203ENSMUST00000112577 Gm9507D3Z5T3 223 aa5.24□□□□□ -1.57
Pkp4-203ENSMUST00000112577 Gm10643Q3URG9 111 aa5.22□□□□□ -1.57
Pkp4-203ENSMUST00000112577 2310050C09RikG5E8Z3 280 aa5.22□□□□□ -1.57
Pkp4-203ENSMUST00000112577 Gm26620Q9CY65 116 aa5.21□□□□□ -1.57
Pkp4-203ENSMUST00000112577 Uqcr11Q9CPX8 56 aa5.21□□□□□ -1.58
Pkp4-203ENSMUST00000112577 Ank2Q8C8R3 3898 aa5.2□□□□□ -1.58
Pkp4-203ENSMUST00000112577 Defb1P56386 69 aa5.19□□□□□ -1.58
Pkp4-203ENSMUST00000112577 2310034C09RikQ9D746 214 aa5.17□□□□□ -1.58
Pkp4-203ENSMUST00000112577 Col7a1Q63870 2944 aa5.16□□□□□ -1.58
Pkp4-203ENSMUST00000112577 Krtap14O08640 167 aa5.15□□□□□ -1.58
Pkp4-203ENSMUST00000112577 Gm2310J3QNJ2 377 aa5.15□□□□□ -1.58
Pkp4-203ENSMUST00000112577 Krtap13O88375 197 aa5.15□□□□□ -1.59
Pkp4-203ENSMUST00000112577 Tnp2P11378 117 aa5.14□□□□□ -1.59
Pkp4-203ENSMUST00000112577 Gm17606F6ZL36 78 aa5.13□□□□□ -1.59
Pkp4-203ENSMUST00000112577 Gm21798J3QNU5 87 aa5.13□□□□□ -1.59
Pkp4-203ENSMUST00000112577 Krtap10-4Q08EG8 221 aa5.12□□□□□ -1.59
Pkp4-203ENSMUST00000112577 VwfQ8CIZ8 2813 aa5.08□□□□□ -1.6
Pkp4-203ENSMUST00000112577 Csmd2V9GX34 3611 aa5.07□□□□□ -1.6
Pkp4-203ENSMUST00000112577 Gm4491E0CX42 125 aa5.04□□□□□ -1.6
Pkp4-203ENSMUST00000112577 Rnase13Q5GAM7 153 aa5.02□□□□□ -1.61
Pkp4-203ENSMUST00000112577 Krtap10-10A0A1W2P7T6 217 aa5□□□□□ -1.61
Pkp4-203ENSMUST00000112577 LystP97412 3788 aa4.98□□□□□ -1.61
Pkp4-203ENSMUST00000112577 Tenm2Q9WTS5 2764 aa4.96□□□□□ -1.62
Pkp4-203ENSMUST00000112577 Rps29P62274 56 aa4.95□□□□□ -1.62
Pkp4-203ENSMUST00000112577 4933415A04RikQ9D443 101 aa4.95□□□□□ -1.62
Pkp4-203ENSMUST00000112577 Gm2696A0A1W2P709 240 aa4.94□□□□□ -1.62
Pkp4-203ENSMUST00000112577 Gm12216A0A1W2P827 62 aa4.94□□□□□ -1.62
Pkp4-203ENSMUST00000112577 Gm9821Q8K076 103 aa4.92□□□□□ -1.62
Pkp4-203ENSMUST00000112577 Muc6Q80T03 2850 aa4.92□□□□□ -1.62
Pkp4-203ENSMUST00000112577 Gm5767A0A0J9YTU8 78 aa4.92□□□□□ -1.62
Pkp4-203ENSMUST00000112577 Gm3646F6S692 53 aa4.89□□□□□ -1.63
Pkp4-203ENSMUST00000112577 Krtap15-1Q9QZU5 150 aa4.89□□□□□ -1.63
Pkp4-203ENSMUST00000112577 BsnO88737 3942 aa4.88□□□□□ -1.63
Pkp4-203ENSMUST00000112577 Sec61bQ9CQS8 96 aaKnown RBP4.87□□□□□ -1.63
Pkp4-203ENSMUST00000112577 CubnQ9JLB4 3623 aa4.87□□□□□ -1.63
Pkp4-203ENSMUST00000112577 2210017I01RikA0A0A6YVV1 95 aa4.86□□□□□ -1.63
Pkp4-203ENSMUST00000112577 Xirp2Q4U4S6 3784 aa4.86□□□□□ -1.63
Pkp4-203ENSMUST00000112577 Gm9955Q8CEJ8 102 aa4.85□□□□□ -1.63
Pkp4-203ENSMUST00000112577 Gm9918Q8BUR5 174 aa4.81□□□□□ -1.64
Pkp4-203ENSMUST00000112577 Dnah14A0A140LIJ4 4489 aa4.8□□□□□ -1.64
Pkp4-203ENSMUST00000112577 Gm3880A0A1B0GSB3 72 aa4.8□□□□□ -1.64
Pkp4-203ENSMUST00000112577 D6Ertd527eA0A0N4SWI3 464 aa4.79□□□□□ -1.64
Pkp4-203ENSMUST00000112577 Megf8P60882 2789 aa4.78□□□□□ -1.64
Pkp4-203ENSMUST00000112577 Cox6b2Q80ZN9 88 aa4.77□□□□□ -1.65
Pkp4-203ENSMUST00000112577 Krtap3-2Q9D638 99 aa4.77□□□□□ -1.65
Pkp4-203ENSMUST00000112577 Krtap3-3Q9D7P0 99 aa4.77□□□□□ -1.65
Pkp4-203ENSMUST00000112577 1700042G07RikB1AUF7 90 aa4.75□□□□□ -1.65
Pkp4-203ENSMUST00000112577 Rpl37Q9D823 97 aa4.7□□□□□ -1.66
Pkp4-203ENSMUST00000112577 A930033H14RikG5E8X6 103 aa4.7□□□□□ -1.66
Pkp4-203ENSMUST00000112577 2310079G19RikQ9D6L6 185 aa4.68□□□□□ -1.66
Pkp4-203ENSMUST00000112577 Gm5965D3Z724 196 aa4.66□□□□□ -1.66
Pkp4-203ENSMUST00000112577 Mp68P56379 58 aa4.65□□□□□ -1.67
Pkp4-203ENSMUST00000112577 Dnah17Q69Z23 4481 aa4.64□□□□□ -1.67
Pkp4-203ENSMUST00000112577 Huwe1Q7TMY8 4377 aaKnown RBP4.64□□□□□ -1.67
Pkp4-203ENSMUST00000112577 Dnah10D3YYQ8 4591 aa4.63□□□□□ -1.67
Pkp4-203ENSMUST00000112577 Fam229aB2KGE5 128 aa4.63□□□□□ -1.67
Pkp4-203ENSMUST00000112577 BC029722A0A0N4SW31 51 aa4.62□□□□□ -1.67
Pkp4-203ENSMUST00000112577 Gm10382Q3V0T5 144 aa4.61□□□□□ -1.67
Pkp4-203ENSMUST00000112577 Hspg2Q05793 3707 aaKnown RBP4.61□□□□□ -1.67
Pkp4-203ENSMUST00000112577 Spink7Q6IE32 76 aa4.6□□□□□ -1.67
Pkp4-203ENSMUST00000112577 CriptO70333 101 aa4.59□□□□□ -1.67
Pkp4-203ENSMUST00000112577 Pla2g10Q9QXX3 151 aa4.59□□□□□ -1.67
Pkp4-203ENSMUST00000112577 Romo1P60603 79 aa4.57□□□□□ -1.68
Pkp4-203ENSMUST00000112577 Dnah7bL7N1Y0 4068 aa4.57□□□□□ -1.68
Pkp4-203ENSMUST00000112577 PlecQ9QXS1 4691 aaKnown RBP4.52□□□□□ -1.69
Pkp4-203ENSMUST00000112577 Gm9736A0A1W2P7N1 277 aa4.5□□□□□ -1.69
Pkp4-203ENSMUST00000112577 TnxbO35452 4006 aa4.5□□□□□ -1.69
Pkp4-203ENSMUST00000112577 Gm20537G3UYK7 97 aa4.5□□□□□ -1.69
Pkp4-203ENSMUST00000112577 Gm17416Q30KP4 66 aa4.5□□□□□ -1.69
Pkp4-203ENSMUST00000112577 Gm19426M0QWC7 77 aa4.49□□□□□ -1.69
Pkp4-203ENSMUST00000112577 Krtap19-5O08632 62 aa4.48□□□□□ -1.69
Pkp4-203ENSMUST00000112577 Dnah11E9Q7N9 4488 aa4.46□□□□□ -1.69
Pkp4-203ENSMUST00000112577 Vps13dB1ART2 4390 aa4.46□□□□□ -1.7
Pkp4-203ENSMUST00000112577 Dnah9B1AR51 4484 aa4.45□□□□□ -1.7
Pkp4-203ENSMUST00000112577 Dnah3Q8BW94 4083 aa4.45□□□□□ -1.7
Pkp4-203ENSMUST00000112577 Dnah5Q8VHE6 4621 aa4.43□□□□□ -1.7
Pkp4-203ENSMUST00000112577 Kmt2aP55200 3966 aa4.42□□□□□ -1.7
Pkp4-203ENSMUST00000112577 2310057N15RikQ9D6T8 200 aa4.42□□□□□ -1.7
Pkp4-203ENSMUST00000112577 Csmd3Q80T79 3707 aa4.42□□□□□ -1.7
Pkp4-203ENSMUST00000112577 Camk2n1Q6QWF9 78 aa4.4□□□□□ -1.7
Pkp4-203ENSMUST00000112577 Dync2h1Q45VK7 4306 aa4.4□□□□□ -1.71
Pkp4-203ENSMUST00000112577 Dnah6E9Q0B6 4144 aa4.38□□□□□ -1.71
Pkp4-203ENSMUST00000112577 Stard9Q80TF6 4561 aa4.37□□□□□ -1.71
Pkp4-203ENSMUST00000112577 PrkdcP97313 4128 aa4.34□□□□□ -1.71
Pkp4-203ENSMUST00000112577 Prm2P07978 107 aa4.3□□□□□ -1.72
Pkp4-203ENSMUST00000112577 B930094E09RikQ8C4T2 136 aa4.3□□□□□ -1.72
Pkp4-203ENSMUST00000112577 Dnah1E9Q8T7 4250 aa4.29□□□□□ -1.72
Pkp4-203ENSMUST00000112577 Dnah2P0C6F1 4456 aa4.28□□□□□ -1.72
Pkp4-203ENSMUST00000112577 ApobE9Q414 4505 aa4.26□□□□□ -1.73
Pkp4-203ENSMUST00000112577 Lrp1bQ9JI18 4599 aa4.26□□□□□ -1.73
Pkp4-203ENSMUST00000112577 Gm20538F6Z9R1 75 aa4.23□□□□□ -1.73
Pkp4-203ENSMUST00000112577 Krtap3-1A2A591 98 aa4.23□□□□□ -1.73
Pkp4-203ENSMUST00000112577 Dync1h1Q9JHU4 4644 aaKnown RBP4.23□□□□□ -1.73
Pkp4-203ENSMUST00000112577 Gm17402F6Z0L5 76 aa4.21□□□□□ -1.74
Pkp4-203ENSMUST00000112577 Krtap13-1Q8K198 168 aa4.21□□□□□ -1.74
Pkp4-203ENSMUST00000112577 Gm40193A0A1B0GT39 78 aa4.16□□□□□ -1.74
Pkp4-203ENSMUST00000112577 Hectd4E9Q2E4 4418 aa4.14□□□□□ -1.75
Pkp4-203ENSMUST00000112577 Ryr1E9PZQ0 5035 aa4.14□□□□□ -1.75
Pkp4-203ENSMUST00000112577 Pkd1O08852 4293 aa4.14□□□□□ -1.75
Retrieved 100 of 22,080 RNA–protein pairs in 74.4 ms