RNA–Protein interactions for RNA: ENSMUST00000112577.7

Pkp4-203, Transcript of Plakophilin-4, mousemouse

TSL 5 BASIC

Gene Pkp4, Length 4,222 nt, Biotype protein coding, Subcellular localisation Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4-203ENSMUST00000112577 Rhox8Q6VSS7 320 aa15.73■□□□□ 0.11
Pkp4-203ENSMUST00000112577 NischQ80TM9 1593 aa15.49■□□□□ 0.07
Pkp4-203ENSMUST00000112577 Abcc9P70170 1546 aa14.77□□□□□ -0.05
Pkp4-203ENSMUST00000112577 Abcc8B2RUS7 1588 aa14.47□□□□□ -0.09
Pkp4-203ENSMUST00000112577 Gm35339A0A140LHH9 1649 aa14.45□□□□□ -0.1
Pkp4-203ENSMUST00000112577 Ccdc136Q3TVA9 1136 aa14.29□□□□□ -0.12
Pkp4-203ENSMUST00000112577 Rtl1Q7M732 1744 aa14.17□□□□□ -0.14
Pkp4-203ENSMUST00000112577 Rpgrip1Q9EPQ2 1331 aa14.14□□□□□ -0.15
Pkp4-203ENSMUST00000112577 Ccdc180J3QNE4 1664 aa14.11□□□□□ -0.15
Pkp4-203ENSMUST00000112577 Trim41Q5NCC3 630 aa14.06□□□□□ -0.16
Pkp4-203ENSMUST00000112577 Ehmt2Q9Z148 1263 aaKnown RBP13.91□□□□□ -0.18
Pkp4-203ENSMUST00000112577 Cngb1E1AZ71 1325 aa13.87□□□□□ -0.19
Pkp4-203ENSMUST00000112577 Esf1Q3V1V3 845 aaKnown RBP13.85□□□□□ -0.19
Pkp4-203ENSMUST00000112577 HrcG5E8J6 738 aa13.83□□□□□ -0.2
Pkp4-203ENSMUST00000112577 Zcchc6Q5BLK4 1491 aaKnown RBP13.73□□□□□ -0.21
Pkp4-203ENSMUST00000112577 Gab3Q8BSM5 595 aa13.68□□□□□ -0.22
Pkp4-203ENSMUST00000112577 Rb1cc1Q9ESK9 1588 aa13.58□□□□□ -0.24
Pkp4-203ENSMUST00000112577 Acin1Q9JIX8 1338 aaKnown RBP13.56□□□□□ -0.24
Pkp4-203ENSMUST00000112577 Dcaf1Q80TR8 1506 aa13.48□□□□□ -0.25
Pkp4-203ENSMUST00000112577 NacadQ5SWP3 1504 aa13.44□□□□□ -0.26
Pkp4-203ENSMUST00000112577 Npm2Q80W85 207 aa13.4□□□□□ -0.26
Pkp4-203ENSMUST00000112577 Baz1aO88379 1555 aa13.38□□□□□ -0.27
Pkp4-203ENSMUST00000112577 Myt1lP97500 1187 aa13.34□□□□□ -0.27
Pkp4-203ENSMUST00000112577 Kdm5dQ62240 1548 aa13.31□□□□□ -0.28
Pkp4-203ENSMUST00000112577 Brd4Q9ESU6 1400 aaKnown RBP13.27□□□□□ -0.29
Pkp4-203ENSMUST00000112577 Zeb1Q64318 1117 aa13.26□□□□□ -0.29
Pkp4-203ENSMUST00000112577 Las1lA2BE28 776 aaKnown RBP13.23□□□□□ -0.29
Pkp4-203ENSMUST00000112577 NefmP08553 848 aa13.21□□□□□ -0.29
Pkp4-203ENSMUST00000112577 Cep164Q5DU05 1446 aa13.17□□□□□ -0.3
Pkp4-203ENSMUST00000112577 ScribQ80U72 1612 aa13.16□□□□□ -0.3
Pkp4-203ENSMUST00000112577 UbtfP25976 765 aaKnown RBP13.14□□□□□ -0.31
Pkp4-203ENSMUST00000112577 Wdr66E9Q743 1299 aa13.12□□□□□ -0.31
Pkp4-203ENSMUST00000112577 Il27Q8K3I6 234 aa13.09□□□□□ -0.31
Pkp4-203ENSMUST00000112577 Chic1Q8CBW7 227 aa13.07□□□□□ -0.32
Pkp4-203ENSMUST00000112577 Crybg2B7ZCC2 1516 aa13.03□□□□□ -0.32
Pkp4-203ENSMUST00000112577 Sycp2Q9CUU3 1500 aa12.97□□□□□ -0.33
Pkp4-203ENSMUST00000112577 Pcgf6Q99NA9 353 aa12.96□□□□□ -0.34
Pkp4-203ENSMUST00000112577 Golga3P55937 1487 aa12.94□□□□□ -0.34
Pkp4-203ENSMUST00000112577 Ube2uB1AUC4 352 aa12.93□□□□□ -0.34
Pkp4-203ENSMUST00000112577 Mier1Q5UAK0 511 aa12.89□□□□□ -0.35
Pkp4-203ENSMUST00000112577 Smarca2Q6DIC0 1577 aa12.87□□□□□ -0.35
Pkp4-203ENSMUST00000112577 Rsf1E9PWW9 1441 aaKnown RBP12.82□□□□□ -0.36
Pkp4-203ENSMUST00000112577 Ap3b1Q9Z1T1 1105 aa12.81□□□□□ -0.36
Pkp4-203ENSMUST00000112577 Npm1Q61937 292 aaKnown RBP12.78□□□□□ -0.36
Pkp4-203ENSMUST00000112577 Supt5hO55201 1082 aaKnown RBP12.77□□□□□ -0.37
Pkp4-203ENSMUST00000112577 Plekhg3Q4VAC9 1341 aa12.72□□□□□ -0.37
Pkp4-203ENSMUST00000112577 Cecr2E9Q2Z1 1453 aa12.72□□□□□ -0.37
Pkp4-203ENSMUST00000112577 Clip1Q922J3 1391 aa12.7□□□□□ -0.38
Pkp4-203ENSMUST00000112577 Ccdc88bQ4QRL3 1481 aa12.69□□□□□ -0.38
Pkp4-203ENSMUST00000112577 Fam50aQ9WV03 339 aaKnown RBP12.68□□□□□ -0.38
Pkp4-203ENSMUST00000112577 CftrP26361 1476 aa12.67□□□□□ -0.38
Pkp4-203ENSMUST00000112577 TonslQ6NZL6 1363 aa12.67□□□□□ -0.38
Pkp4-203ENSMUST00000112577 Synj1Q8CHC4 1574 aa12.6□□□□□ -0.39
Pkp4-203ENSMUST00000112577 Cdk11bP24788 784 aaKnown RBP12.6□□□□□ -0.39
Pkp4-203ENSMUST00000112577 Ubl4bQ9CQ84 188 aa12.6□□□□□ -0.39
Pkp4-203ENSMUST00000112577 Pds5bQ4VA53 1446 aaKnown RBP12.58□□□□□ -0.4
Pkp4-203ENSMUST00000112577 Fmn1Q05860 1466 aa12.57□□□□□ -0.4
Pkp4-203ENSMUST00000112577 Lmod2Q3UHZ5 550 aa12.56□□□□□ -0.4
Pkp4-203ENSMUST00000112577 Kif15Q6P9L6 1387 aa12.56□□□□□ -0.4
Pkp4-203ENSMUST00000112577 Nop58Q6DFW4 536 aaKnown RBP12.54□□□□□ -0.4
Pkp4-203ENSMUST00000112577 Ercc6F8VPZ5 1481 aa12.53□□□□□ -0.4
Pkp4-203ENSMUST00000112577 Stra8P70278 393 aa12.53□□□□□ -0.4
Pkp4-203ENSMUST00000112577 NclP09405 707 aaKnown RBP12.52□□□□□ -0.4
Pkp4-203ENSMUST00000112577 Smarca4Q3TKT4 1613 aaKnown RBP12.51□□□□□ -0.41
Pkp4-203ENSMUST00000112577 Ppargc1bQ8VHJ7 1014 aa12.5□□□□□ -0.41
Pkp4-203ENSMUST00000112577 ClspnQ80YR7 1315 aa12.5□□□□□ -0.41
Pkp4-203ENSMUST00000112577 Cttnbp2B9EJA2 1648 aa12.49□□□□□ -0.41
Pkp4-203ENSMUST00000112577 Setd5Q5XJV7 1441 aa12.47□□□□□ -0.41
Pkp4-203ENSMUST00000112577 Atad2bE9Q166 1460 aaKnown RBP12.46□□□□□ -0.41
Pkp4-203ENSMUST00000112577 Ccdc18Q640L5 1455 aa12.46□□□□□ -0.42
Pkp4-203ENSMUST00000112577 Sall2Q9QX96 1004 aa12.45□□□□□ -0.42
Pkp4-203ENSMUST00000112577 Cep162Q6ZQ06 1403 aa12.45□□□□□ -0.42
Pkp4-203ENSMUST00000112577 Eea1Q8BL66 1411 aa12.43□□□□□ -0.42
Pkp4-203ENSMUST00000112577 Eid3Q3V124 375 aa12.41□□□□□ -0.42
Pkp4-203ENSMUST00000112577 BlmO88700 1416 aa12.41□□□□□ -0.42
Pkp4-203ENSMUST00000112577 Ccer2J3QPU5 274 aa12.37□□□□□ -0.43
Pkp4-203ENSMUST00000112577 CenpbP27790 599 aa12.36□□□□□ -0.43
Pkp4-203ENSMUST00000112577 Neurod1Q60867 357 aa12.36□□□□□ -0.43
Pkp4-203ENSMUST00000112577 BicraF8VPZ9 1578 aa12.35□□□□□ -0.43
Pkp4-203ENSMUST00000112577 Iqgap2Q3UQ44 1575 aa12.34□□□□□ -0.43
Pkp4-203ENSMUST00000112577 Slc24a1Q91WD8 1130 aa12.33□□□□□ -0.44
Pkp4-203ENSMUST00000112577 Rapgef2Q8CHG7 1496 aa12.31□□□□□ -0.44
Pkp4-203ENSMUST00000112577 Tnnt3Q9QZ47 272 aa12.31□□□□□ -0.44
Pkp4-203ENSMUST00000112577 Pelp1Q9DBD5 1123 aaKnown RBP12.24□□□□□ -0.45
Pkp4-203ENSMUST00000112577 NrdcQ8BHG1 1161 aa12.23□□□□□ -0.45
Pkp4-203ENSMUST00000112577 Phldb1Q6PDH0 1371 aaKnown RBP12.23□□□□□ -0.45
Pkp4-203ENSMUST00000112577 Aebp2Q9Z248 504 aaKnown RBP12.22□□□□□ -0.45
Pkp4-203ENSMUST00000112577 Cc2d2aQ8CFW7 1633 aa12.21□□□□□ -0.45
Pkp4-203ENSMUST00000112577 Cux2P70298 1426 aa12.2□□□□□ -0.46
Pkp4-203ENSMUST00000112577 Anks4bQ8K3X6 423 aa12.2□□□□□ -0.46
Pkp4-203ENSMUST00000112577 Top2aQ01320 1528 aaKnown RBP12.2□□□□□ -0.46
Pkp4-203ENSMUST00000112577 Chic2Q9D9G3 165 aa12.19□□□□□ -0.46
Pkp4-203ENSMUST00000112577 Top2bQ64511 1612 aa12.18□□□□□ -0.46
Pkp4-203ENSMUST00000112577 Anp32bQ9EST5 272 aaKnown RBP12.17□□□□□ -0.46
Pkp4-203ENSMUST00000112577 Baz1bQ9Z277 1479 aa12.15□□□□□ -0.46
Pkp4-203ENSMUST00000112577 Mapk8ip2Q9ERE9 830 aa12.15□□□□□ -0.46
Pkp4-203ENSMUST00000112577 Fkbp15Q6P9Q6 1216 aaKnown RBP12.13□□□□□ -0.47
Pkp4-203ENSMUST00000112577 Zbtb7cQ8VCZ7 619 aa12.1□□□□□ -0.47
Pkp4-203ENSMUST00000112577 Carmil1Q6EDY6 1374 aa12.1□□□□□ -0.47
Pkp4-203ENSMUST00000112577 Mia2Q91ZV0 1396 aa12.1□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 110.3 ms