RNA–Protein interactions for RNA: ENSMUST00000093196.10

Hmgb1-202, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,092 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-202ENSMUST00000093196 Foxi2Q3I5G5 311 aa5.06□□□□□ -1.6
Hmgb1-202ENSMUST00000093196 Mustn1Q99JI1 82 aa5.06□□□□□ -1.6
Hmgb1-202ENSMUST00000093196 Krtap5-2Q9D5Z7 189 aa5.06□□□□□ -1.6
Hmgb1-202ENSMUST00000093196 Fgf23Q9EPC2 251 aa5.06□□□□□ -1.6
Hmgb1-202ENSMUST00000093196 Igkv8-30A0A140T8M3 121 aa5.05□□□□□ -1.6
Hmgb1-202ENSMUST00000093196 Gm6217A0A1Y7VJK9 128 aa5.05□□□□□ -1.6
Hmgb1-202ENSMUST00000093196 P01837 106 aa5.05□□□□□ -1.6
Hmgb1-202ENSMUST00000093196 Defb50Q6TU36 73 aa5.05□□□□□ -1.6
Hmgb1-202ENSMUST00000093196 Uqcc3Q8K2T4 89 aa5.05□□□□□ -1.6
Hmgb1-202ENSMUST00000093196 Mpv17l2Q8VIK2 200 aa5.05□□□□□ -1.6
Hmgb1-202ENSMUST00000093196 Ssbp1Q9CYR0 152 aaKnown RBP5.05□□□□□ -1.6
Hmgb1-202ENSMUST00000093196 Ighv1-62-1A0A075B5U3 116 aa5.04□□□□□ -1.6
Hmgb1-202ENSMUST00000093196 LeprotO89013 131 aa5.04□□□□□ -1.6
Hmgb1-202ENSMUST00000093196 Bsph2Q0Q236 131 aa5.04□□□□□ -1.6
Hmgb1-202ENSMUST00000093196 Trappc1Q5NCF2 145 aa5.04□□□□□ -1.6
Hmgb1-202ENSMUST00000093196 Try10Q792Z1 246 aaKnown RBP5.04□□□□□ -1.6
Hmgb1-202ENSMUST00000093196 Sec11aQ9R0P6 179 aa5.04□□□□□ -1.6
Hmgb1-202ENSMUST00000093196 Hbb-bsA8DUK4 147 aa5.03□□□□□ -1.6
Hmgb1-202ENSMUST00000093196 Hbb-b1P02088 147 aa5.03□□□□□ -1.6
Hmgb1-202ENSMUST00000093196 Ccl17F6R5P4 103 aa5.02□□□□□ -1.61
Hmgb1-202ENSMUST00000093196 Gm1553Q66VB7 94 aa5.02□□□□□ -1.61
Hmgb1-202ENSMUST00000093196 Trav4n-4A0A075B615 110 aa5.01□□□□□ -1.61
Hmgb1-202ENSMUST00000093196 Gm4553A0A1B0GSA9 284 aa5.01□□□□□ -1.61
Hmgb1-202ENSMUST00000093196 Gm45717A0A1B0GT68 152 aa5.01□□□□□ -1.61
Hmgb1-202ENSMUST00000093196 Igkv3-5A0A140T8M6 119 aa5□□□□□ -1.61
Hmgb1-202ENSMUST00000093196 AponG3X9D6 251 aa5□□□□□ -1.61
Hmgb1-202ENSMUST00000093196 Gm10295Q8CCF3 114 aa5□□□□□ -1.61
Hmgb1-202ENSMUST00000093196 Defb45Q3V490 66 aa4.99□□□□□ -1.61
Hmgb1-202ENSMUST00000093196 5930422O12RikQ8C4Y4 123 aa4.99□□□□□ -1.61
Hmgb1-202ENSMUST00000093196 Lce1a2Q9D1K4 149 aa4.99□□□□□ -1.61
Hmgb1-202ENSMUST00000093196 4930442H23RikQ9D5G7 103 aa4.99□□□□□ -1.61
Hmgb1-202ENSMUST00000093196 Lce1iQ9D6P5 149 aa4.99□□□□□ -1.61
Hmgb1-202ENSMUST00000093196 Reg3dQ9QUS9 175 aa4.99□□□□□ -1.61
Hmgb1-202ENSMUST00000093196 Hmcn1D3YXG0 5634 aa4.98□□□□□ -1.61
Hmgb1-202ENSMUST00000093196 Brd3osA0A1B0GRB6 84 aa4.98□□□□□ -1.61
Hmgb1-202ENSMUST00000093196 Fam240aJ3QNP9 97 aa4.98□□□□□ -1.61
Hmgb1-202ENSMUST00000093196 Cypt14J3QPF7 87 aa4.98□□□□□ -1.61
Hmgb1-202ENSMUST00000093196 Plac1Q9JI83 173 aa4.98□□□□□ -1.61
Hmgb1-202ENSMUST00000093196 Gm20730A0A075B5J6 119 aa4.97□□□□□ -1.61
Hmgb1-202ENSMUST00000093196 Trav4-3A0A0B4J1K1 110 aa4.97□□□□□ -1.61
Hmgb1-202ENSMUST00000093196 Gm42674D3YUT9 64 aa4.97□□□□□ -1.61
Hmgb1-202ENSMUST00000093196 Gm44965A0A0N4SVR3 59 aa4.96□□□□□ -1.62
Hmgb1-202ENSMUST00000093196 S100a8P27005 89 aa4.96□□□□□ -1.62
Hmgb1-202ENSMUST00000093196 Erg28Q9ERY9 140 aa4.96□□□□□ -1.62
Hmgb1-202ENSMUST00000093196 Dpm2Q9Z324 84 aa4.96□□□□□ -1.62
Hmgb1-202ENSMUST00000093196 Ube2d4D3YUH6 135 aa4.95□□□□□ -1.62
Hmgb1-202ENSMUST00000093196 Wfdc13Q5DQQ6 81 aa4.95□□□□□ -1.62
Hmgb1-202ENSMUST00000093196 Prelid3aQ8VE85 172 aa4.95□□□□□ -1.62
Hmgb1-202ENSMUST00000093196 Igkv8-28A0A0G2JE47 121 aa4.94□□□□□ -1.62
Hmgb1-202ENSMUST00000093196 Isg15Q64339 161 aaKnown RBP4.94□□□□□ -1.62
Hmgb1-202ENSMUST00000093196 Krtap13-1Q8K198 168 aa4.94□□□□□ -1.62
Hmgb1-202ENSMUST00000093196 Dmac1Q9CQ00 111 aa4.94□□□□□ -1.62
Hmgb1-202ENSMUST00000093196 Msrb1Q9JLC3 116 aa4.94□□□□□ -1.62
Hmgb1-202ENSMUST00000093196 Timm17bQ9Z0V7 172 aa4.94□□□□□ -1.62
Hmgb1-202ENSMUST00000093196 Iglc1A0A0G2JE99 106 aa4.93□□□□□ -1.62
Hmgb1-202ENSMUST00000093196 Vamp8O70404 101 aa4.93□□□□□ -1.62
Hmgb1-202ENSMUST00000093196 Tax1bp3Q9DBG9 124 aa4.93□□□□□ -1.62
Hmgb1-202ENSMUST00000093196 Trav4d-3A0A075B625 110 aa4.92□□□□□ -1.62
Hmgb1-202ENSMUST00000093196 Gm10160F6Y577 67 aa4.92□□□□□ -1.62
Hmgb1-202ENSMUST00000093196 Gm11027G8JL69 66 aa4.92□□□□□ -1.62
Hmgb1-202ENSMUST00000093196 Gm6812B1AXU1 112 aa4.91□□□□□ -1.62
Hmgb1-202ENSMUST00000093196 Smim13E9Q942 88 aa4.91□□□□□ -1.62
Hmgb1-202ENSMUST00000093196 4930432M17RikQ3V0W9 174 aa4.91□□□□□ -1.62
Hmgb1-202ENSMUST00000093196 Defa22Q8C1N8 93 aa4.91□□□□□ -1.62
Hmgb1-202ENSMUST00000093196 Ndufaf8A2AMZ4 74 aa4.9□□□□□ -1.63
Hmgb1-202ENSMUST00000093196 Tcl1b3P56842 122 aa4.9□□□□□ -1.63
Hmgb1-202ENSMUST00000093196 TeppQ6IMH0 216 aa4.9□□□□□ -1.63
Hmgb1-202ENSMUST00000093196 Gm28051J3QMA2 81 aa4.89□□□□□ -1.63
Hmgb1-202ENSMUST00000093196 Gm10577Q3UDV9 132 aa4.89□□□□□ -1.63
Hmgb1-202ENSMUST00000093196 4930415O20RikQ8CDT5 131 aa4.89□□□□□ -1.63
Hmgb1-202ENSMUST00000093196 P01843 105 aa4.88□□□□□ -1.63
Hmgb1-202ENSMUST00000093196 Cox7cP17665 63 aa4.88□□□□□ -1.63
Hmgb1-202ENSMUST00000093196 Gm10845Q3UNY9 185 aa4.88□□□□□ -1.63
Hmgb1-202ENSMUST00000093196 Krtap4-16Q91W93 202 aa4.88□□□□□ -1.63
Hmgb1-202ENSMUST00000093196 Gemin7Q9CWY4 129 aa4.88□□□□□ -1.63
Hmgb1-202ENSMUST00000093196 Q9DAA3 117 aa4.88□□□□□ -1.63
Hmgb1-202ENSMUST00000093196 Tmem243B2RVB9 118 aa4.87□□□□□ -1.63
Hmgb1-202ENSMUST00000093196 Ociad2Q9D8W7 154 aa4.87□□□□□ -1.63
Hmgb1-202ENSMUST00000093196 Cd164Q9R0L9 197 aa4.87□□□□□ -1.63
Hmgb1-202ENSMUST00000093196 Gm10139O88245 57 aa4.86□□□□□ -1.63
Hmgb1-202ENSMUST00000093196 Rmi2Q3UPE3 149 aa4.86□□□□□ -1.63
Hmgb1-202ENSMUST00000093196 Gm28269A0A087WSG3 125 aa4.85□□□□□ -1.63
Hmgb1-202ENSMUST00000093196 1700011M02RikB1AX35 88 aa4.85□□□□□ -1.63
Hmgb1-202ENSMUST00000093196 Krtap22-2J3QNX6 67 aa4.85□□□□□ -1.63
Hmgb1-202ENSMUST00000093196 Cops9Q3U898 57 aa4.85□□□□□ -1.63
Hmgb1-202ENSMUST00000093196 Sostdc1Q9CQN4 206 aa4.85□□□□□ -1.63
Hmgb1-202ENSMUST00000093196 Glrp1E9Q9S8 174 aa4.83□□□□□ -1.64
Hmgb1-202ENSMUST00000093196 Gm21886J3QJU9 214 aa4.83□□□□□ -1.64
Hmgb1-202ENSMUST00000093196 A830005F24RikQ8BRT5 167 aa4.83□□□□□ -1.64
Hmgb1-202ENSMUST00000093196 Q9DAA7 145 aa4.83□□□□□ -1.64
Hmgb1-202ENSMUST00000093196 Gm26602M0QWA4 95 aa4.82□□□□□ -1.64
Hmgb1-202ENSMUST00000093196 Ccl25O35903 144 aa4.82□□□□□ -1.64
Hmgb1-202ENSMUST00000093196 G0s2Q61585 103 aa4.82□□□□□ -1.64
Hmgb1-202ENSMUST00000093196 Tac4Q99N14 128 aa4.82□□□□□ -1.64
Hmgb1-202ENSMUST00000093196 Igkv8-26A0A075B5N5 123 aa4.81□□□□□ -1.64
Hmgb1-202ENSMUST00000093196 Ighv1-62-2A0A0A6YXZ4 119 aa4.81□□□□□ -1.64
Hmgb1-202ENSMUST00000093196 Krtap19-9aF8WH65 55 aa4.81□□□□□ -1.64
Hmgb1-202ENSMUST00000093196 7530416G11RikJ3QJX6 159 aa4.8□□□□□ -1.64
Hmgb1-202ENSMUST00000093196 Igkv2-109A0A075B5K6 120 aa4.78□□□□□ -1.64
Hmgb1-202ENSMUST00000093196 2310034G01RikA0A286YDL3 209 aa4.78□□□□□ -1.64
Retrieved 100 of 22,080 RNA–protein pairs in 174.8 ms