RNA–Protein interactions for RNA: ENSMUST00000077672.11

Col4a3bp-201, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a3bp, Length 2,746 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-201ENSMUST00000077672 Spata3Q9D9T6 193 aa10.57□□□□□ -0.72
Col4a3bp-201ENSMUST00000077672 Huwe1Q7TMY8 4377 aaKnown RBP10.56□□□□□ -0.72
Col4a3bp-201ENSMUST00000077672 Muc6Q80T03 2850 aa10.55□□□□□ -0.72
Col4a3bp-201ENSMUST00000077672 Defb10Q8R2I8 73 aa10.55□□□□□ -0.72
Col4a3bp-201ENSMUST00000077672 Gm9821Q8K076 103 aa10.54□□□□□ -0.72
Col4a3bp-201ENSMUST00000077672 Igsf10Q3V1M1 2594 aa10.53□□□□□ -0.72
Col4a3bp-201ENSMUST00000077672 Gm10065F6TJM2 114 aa10.52□□□□□ -0.73
Col4a3bp-201ENSMUST00000077672 Gm17349F7BGH6 99 aa10.49□□□□□ -0.73
Col4a3bp-201ENSMUST00000077672 Ndufs5Q99LY9 106 aa10.47□□□□□ -0.73
Col4a3bp-201ENSMUST00000077672 Krtap29-1A2A5X4 342 aa10.47□□□□□ -0.73
Col4a3bp-201ENSMUST00000077672 Gm21798J3QNU5 87 aa10.44□□□□□ -0.74
Col4a3bp-201ENSMUST00000077672 Anapc11Q9CPX9 84 aa10.43□□□□□ -0.74
Col4a3bp-201ENSMUST00000077672 Cypt14J3QPF7 87 aa10.42□□□□□ -0.74
Col4a3bp-201ENSMUST00000077672 Pkd1l1Q8R526 2615 aa10.41□□□□□ -0.74
Col4a3bp-201ENSMUST00000077672 Gm16253D3Z167 63 aa10.4□□□□□ -0.74
Col4a3bp-201ENSMUST00000077672 PlecQ9QXS1 4691 aaKnown RBP10.39□□□□□ -0.75
Col4a3bp-201ENSMUST00000077672 TnxbO35452 4006 aa10.38□□□□□ -0.75
Col4a3bp-201ENSMUST00000077672 Adm2Q7TNK8 150 aa10.38□□□□□ -0.75
Col4a3bp-201ENSMUST00000077672 NbdyA0A0N4SUI7 68 aa10.37□□□□□ -0.75
Col4a3bp-201ENSMUST00000077672 Znf706Q9D115 76 aaKnown RBP10.37□□□□□ -0.75
Col4a3bp-201ENSMUST00000077672 Fras1Q80T14 4010 aa10.36□□□□□ -0.75
Col4a3bp-201ENSMUST00000077672 Gm9507D3Z5T3 223 aa10.33□□□□□ -0.76
Col4a3bp-201ENSMUST00000077672 2310034C09RikQ9D746 214 aa10.33□□□□□ -0.76
Col4a3bp-201ENSMUST00000077672 Gm4707V9GXN5 68 aa10.33□□□□□ -0.76
Col4a3bp-201ENSMUST00000077672 PrkdcP97313 4128 aa10.32□□□□□ -0.76
Col4a3bp-201ENSMUST00000077672 Defb39Q70KL3 74 aa10.3□□□□□ -0.76
Col4a3bp-201ENSMUST00000077672 Cypt15B1AXS0 87 aa10.28□□□□□ -0.76
Col4a3bp-201ENSMUST00000077672 Q8BGJ3 129 aa10.27□□□□□ -0.77
Col4a3bp-201ENSMUST00000077672 1600014C23RikQ9DAX4 101 aa10.26□□□□□ -0.77
Col4a3bp-201ENSMUST00000077672 Tnp2P11378 117 aa10.26□□□□□ -0.77
Col4a3bp-201ENSMUST00000077672 Gm9918Q8BUR5 174 aa10.25□□□□□ -0.77
Col4a3bp-201ENSMUST00000077672 Dnah5Q8VHE6 4621 aa10.23□□□□□ -0.77
Col4a3bp-201ENSMUST00000077672 Gm12216A0A1W2P827 62 aa10.23□□□□□ -0.77
Col4a3bp-201ENSMUST00000077672 Krtap14O08640 167 aa10.22□□□□□ -0.77
Col4a3bp-201ENSMUST00000077672 Defb13Q8R2I4 64 aa10.21□□□□□ -0.77
Col4a3bp-201ENSMUST00000077672 Gpr15lA0A0B4J1N3 78 aa10.2□□□□□ -0.78
Col4a3bp-201ENSMUST00000077672 Dnah7cA0A087WR13 4024 aa10.16□□□□□ -0.78
Col4a3bp-201ENSMUST00000077672 Pla2g10Q9QXX3 151 aa10.16□□□□□ -0.78
Col4a3bp-201ENSMUST00000077672 Hectd4E9Q2E4 4418 aa10.15□□□□□ -0.78
Col4a3bp-201ENSMUST00000077672 Gm10999F6Q4M4 69 aa10.09□□□□□ -0.79
Col4a3bp-201ENSMUST00000077672 2310050C09RikG5E8Z3 280 aa10.09□□□□□ -0.79
Col4a3bp-201ENSMUST00000077672 Spaca4Q80ZQ0 127 aa10.09□□□□□ -0.79
Col4a3bp-201ENSMUST00000077672 Dnah2P0C6F1 4456 aa10.07□□□□□ -0.8
Col4a3bp-201ENSMUST00000077672 Krtap10-4Q08EG8 221 aa10.03□□□□□ -0.8
Col4a3bp-201ENSMUST00000077672 Krtap13O88375 197 aa10.03□□□□□ -0.8
Col4a3bp-201ENSMUST00000077672 Wfdc3Q14AE4 130 aa10.01□□□□□ -0.81
Col4a3bp-201ENSMUST00000077672 Vps13dB1ART2 4390 aa10.01□□□□□ -0.81
Col4a3bp-201ENSMUST00000077672 Ly6g6cQ9Z1Q4 126 aa9.99□□□□□ -0.81
Col4a3bp-201ENSMUST00000077672 2310079G19RikQ9D6L6 185 aa9.98□□□□□ -0.81
Col4a3bp-201ENSMUST00000077672 Dnah7aE9Q0T8 4024 aa9.98□□□□□ -0.81
Col4a3bp-201ENSMUST00000077672 Stard9Q80TF6 4561 aa9.95□□□□□ -0.82
Col4a3bp-201ENSMUST00000077672 Pkd1O08852 4293 aa9.95□□□□□ -0.82
Col4a3bp-201ENSMUST00000077672 Defb1P56386 69 aa9.94□□□□□ -0.82
Col4a3bp-201ENSMUST00000077672 Lrp1bQ9JI18 4599 aa9.93□□□□□ -0.82
Col4a3bp-201ENSMUST00000077672 ApobE9Q414 4505 aa9.92□□□□□ -0.82
Col4a3bp-201ENSMUST00000077672 Gm20538F6Z9R1 75 aa9.88□□□□□ -0.83
Col4a3bp-201ENSMUST00000077672 FcgbpE9Q0B5 2583 aa9.85□□□□□ -0.83
Col4a3bp-201ENSMUST00000077672 Krtap3-2Q9D638 99 aa9.83□□□□□ -0.84
Col4a3bp-201ENSMUST00000077672 Krtap3-3Q9D7P0 99 aa9.83□□□□□ -0.84
Col4a3bp-201ENSMUST00000077672 Mp68P56379 58 aa9.81□□□□□ -0.84
Col4a3bp-201ENSMUST00000077672 4930507D05RikQ8C9C9 103 aa9.81□□□□□ -0.84
Col4a3bp-201ENSMUST00000077672 Defb11Q8R2I7 77 aa9.8□□□□□ -0.84
Col4a3bp-201ENSMUST00000077672 A930033H14RikG5E8X6 103 aa9.77□□□□□ -0.84
Col4a3bp-201ENSMUST00000077672 Krtap10-10A0A1W2P7T6 217 aa9.74□□□□□ -0.85
Col4a3bp-201ENSMUST00000077672 D6Ertd527eA0A0N4SWI3 464 aa9.73□□□□□ -0.85
Col4a3bp-201ENSMUST00000077672 Pkhd1E9PZ36 4059 aa9.71□□□□□ -0.86
Col4a3bp-201ENSMUST00000077672 Gm2696A0A1W2P709 240 aa9.66□□□□□ -0.86
Col4a3bp-201ENSMUST00000077672 Gm20537G3UYK7 97 aa9.66□□□□□ -0.86
Col4a3bp-201ENSMUST00000077672 SacsQ9JLC8 4582 aa9.64□□□□□ -0.87
Col4a3bp-201ENSMUST00000077672 Romo1P60603 79 aa9.63□□□□□ -0.87
Col4a3bp-201ENSMUST00000077672 Gm4491E0CX42 125 aa9.62□□□□□ -0.87
Col4a3bp-201ENSMUST00000077672 Gm3880A0A1B0GSB3 72 aa9.61□□□□□ -0.87
Col4a3bp-201ENSMUST00000077672 Fat2Q5F226 4351 aa9.58□□□□□ -0.88
Col4a3bp-201ENSMUST00000077672 Gm11939A2A592 99 aa9.52□□□□□ -0.89
Col4a3bp-201ENSMUST00000077672 Fat1A0A1L1SQU7 4645 aa9.48□□□□□ -0.89
Col4a3bp-201ENSMUST00000077672 Rps29P62274 56 aa9.48□□□□□ -0.89
Col4a3bp-201ENSMUST00000077672 Dync1h1Q9JHU4 4644 aaKnown RBP9.46□□□□□ -0.9
Col4a3bp-201ENSMUST00000077672 Cox6b2Q80ZN9 88 aa9.45□□□□□ -0.9
Col4a3bp-201ENSMUST00000077672 RetnlbQ99P86 105 aa9.42□□□□□ -0.9
Col4a3bp-201ENSMUST00000077672 CriptO70333 101 aa9.35□□□□□ -0.91
Col4a3bp-201ENSMUST00000077672 Prm2P07978 107 aa9.33□□□□□ -0.92
Col4a3bp-201ENSMUST00000077672 Gm9955Q8CEJ8 102 aa9.31□□□□□ -0.92
Col4a3bp-201ENSMUST00000077672 Vps13bQ80TY5 3993 aa9.27□□□□□ -0.93
Col4a3bp-201ENSMUST00000077672 Pkhd1l1Q80ZA4 4249 aa9.26□□□□□ -0.93
Col4a3bp-201ENSMUST00000077672 Gm5767A0A0J9YTU8 78 aa9.18□□□□□ -0.94
Col4a3bp-201ENSMUST00000077672 Lrp1Q91ZX7 4545 aaKnown RBP9.16□□□□□ -0.94
Col4a3bp-201ENSMUST00000077672 Ryr3A2AGL3 4863 aa9.16□□□□□ -0.94
Col4a3bp-201ENSMUST00000077672 Rpl37Q9D823 97 aa9.13□□□□□ -0.95
Col4a3bp-201ENSMUST00000077672 Gm10382Q3V0T5 144 aa9.07□□□□□ -0.96
Col4a3bp-201ENSMUST00000077672 Gm17606F6ZL36 78 aa9.03□□□□□ -0.96
Col4a3bp-201ENSMUST00000077672 Ndufaf8A2AMZ4 74 aa9□□□□□ -0.97
Col4a3bp-201ENSMUST00000077672 Rnase13Q5GAM7 153 aa8.97□□□□□ -0.97
Col4a3bp-201ENSMUST00000077672 Gm9736A0A1W2P7N1 277 aa8.96□□□□□ -0.97
Col4a3bp-201ENSMUST00000077672 Fat3Q8BNA6 4555 aa8.96□□□□□ -0.97
Col4a3bp-201ENSMUST00000077672 Krtap19-5O08632 62 aa8.95□□□□□ -0.98
Col4a3bp-201ENSMUST00000077672 Krtap15-1Q9QZU5 150 aa8.92□□□□□ -0.98
Col4a3bp-201ENSMUST00000077672 Kmt2cQ8BRH4 4903 aa8.9□□□□□ -0.98
Col4a3bp-201ENSMUST00000077672 Gm5965D3Z724 196 aa8.89□□□□□ -0.99
Col4a3bp-201ENSMUST00000077672 Mycbp2Q7TPH6 4711 aa8.88□□□□□ -0.99
Col4a3bp-201ENSMUST00000077672 Krtap3-1A2A591 98 aa8.82□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms