RNA–Protein interactions for RNA: ENSMUST00000041010.14

Ccdc9-201, Transcript of Coiled-coil domain-containing protein 9, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ccdc9, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9-201ENSMUST00000041010 Gm9918Q8BUR5 174 aa13.18□□□□□ -0.3
Ccdc9-201ENSMUST00000041010 Nupr2Q497P3 102 aa13.17□□□□□ -0.3
Ccdc9-201ENSMUST00000041010 Uqcr11Q9CPX8 56 aa13.16□□□□□ -0.3
Ccdc9-201ENSMUST00000041010 Igkv3-5A0A140T8M6 119 aa13.15□□□□□ -0.3
Ccdc9-201ENSMUST00000041010 Gm9507D3Z5T3 223 aa13.14□□□□□ -0.31
Ccdc9-201ENSMUST00000041010 FasnP19096 2504 aaKnown RBP13.13□□□□□ -0.31
Ccdc9-201ENSMUST00000041010 PlecQ9QXS1 4691 aaKnown RBP13.12□□□□□ -0.31
Ccdc9-201ENSMUST00000041010 OxtP35454 125 aa13.11□□□□□ -0.31
Ccdc9-201ENSMUST00000041010 Gm9821Q8K076 103 aa13.07□□□□□ -0.32
Ccdc9-201ENSMUST00000041010 Ly6g6cQ9Z1Q4 126 aa13.06□□□□□ -0.32
Ccdc9-201ENSMUST00000041010 Gm21798J3QNU5 87 aa13.05□□□□□ -0.32
Ccdc9-201ENSMUST00000041010 Ndufs5Q99LY9 106 aa13.05□□□□□ -0.32
Ccdc9-201ENSMUST00000041010 Gm27235Q3UW50 83 aa13.05□□□□□ -0.32
Ccdc9-201ENSMUST00000041010 2310050C09RikG5E8Z3 280 aa13.03□□□□□ -0.32
Ccdc9-201ENSMUST00000041010 Q8K1L6 76 aa13.01□□□□□ -0.33
Ccdc9-201ENSMUST00000041010 1700012A03RikQ9DAF1 130 aa13□□□□□ -0.33
Ccdc9-201ENSMUST00000041010 Dnah11E9Q7N9 4488 aa12.99□□□□□ -0.33
Ccdc9-201ENSMUST00000041010 6030445D17RikE9Q8F9 148 aa12.98□□□□□ -0.33
Ccdc9-201ENSMUST00000041010 Dnah9B1AR51 4484 aa12.97□□□□□ -0.33
Ccdc9-201ENSMUST00000041010 Defb9Q8R2I6 67 aa12.96□□□□□ -0.33
Ccdc9-201ENSMUST00000041010 Gm10065F6TJM2 114 aa12.95□□□□□ -0.34
Ccdc9-201ENSMUST00000041010 Gm10642Q3TWM1 71 aa12.88□□□□□ -0.35
Ccdc9-201ENSMUST00000041010 Gm16253D3Z167 63 aa12.87□□□□□ -0.35
Ccdc9-201ENSMUST00000041010 Krtap29-1A2A5X4 342 aa12.85□□□□□ -0.35
Ccdc9-201ENSMUST00000041010 Krtap10-10A0A1W2P7T6 217 aa12.84□□□□□ -0.35
Ccdc9-201ENSMUST00000041010 Cypt14J3QPF7 87 aa12.82□□□□□ -0.36
Ccdc9-201ENSMUST00000041010 Dnah7aE9Q0T8 4024 aa12.81□□□□□ -0.36
Ccdc9-201ENSMUST00000041010 Dnah7cA0A087WR13 4024 aa12.8□□□□□ -0.36
Ccdc9-201ENSMUST00000041010 2310034C09RikQ9D746 214 aa12.79□□□□□ -0.36
Ccdc9-201ENSMUST00000041010 Cypt15B1AXS0 87 aa12.78□□□□□ -0.36
Ccdc9-201ENSMUST00000041010 Q8BGJ3 129 aa12.78□□□□□ -0.36
Ccdc9-201ENSMUST00000041010 Znf706Q9D115 76 aaKnown RBP12.75□□□□□ -0.37
Ccdc9-201ENSMUST00000041010 Defb13Q8R2I4 64 aa12.74□□□□□ -0.37
Ccdc9-201ENSMUST00000041010 Gpr15lA0A0B4J1N3 78 aa12.68□□□□□ -0.38
Ccdc9-201ENSMUST00000041010 Anapc11Q9CPX9 84 aa12.67□□□□□ -0.38
Ccdc9-201ENSMUST00000041010 NbdyA0A0N4SUI7 68 aa12.63□□□□□ -0.39
Ccdc9-201ENSMUST00000041010 Pla2g10Q9QXX3 151 aa12.63□□□□□ -0.39
Ccdc9-201ENSMUST00000041010 Vps13dB1ART2 4390 aa12.63□□□□□ -0.39
Ccdc9-201ENSMUST00000041010 Gm10999F6Q4M4 69 aa12.61□□□□□ -0.39
Ccdc9-201ENSMUST00000041010 Krtap10-4Q08EG8 221 aa12.61□□□□□ -0.39
Ccdc9-201ENSMUST00000041010 1600014C23RikQ9DAX4 101 aa12.58□□□□□ -0.4
Ccdc9-201ENSMUST00000041010 Dnah2P0C6F1 4456 aa12.58□□□□□ -0.4
Ccdc9-201ENSMUST00000041010 Gm12216A0A1W2P827 62 aa12.56□□□□□ -0.4
Ccdc9-201ENSMUST00000041010 Adm2Q7TNK8 150 aa12.56□□□□□ -0.4
Ccdc9-201ENSMUST00000041010 Tnp2P11378 117 aa12.53□□□□□ -0.4
Ccdc9-201ENSMUST00000041010 Defb39Q70KL3 74 aa12.52□□□□□ -0.4
Ccdc9-201ENSMUST00000041010 Pkd1O08852 4293 aa12.48□□□□□ -0.41
Ccdc9-201ENSMUST00000041010 2310079G19RikQ9D6L6 185 aa12.47□□□□□ -0.41
Ccdc9-201ENSMUST00000041010 Defb1P56386 69 aa12.44□□□□□ -0.42
Ccdc9-201ENSMUST00000041010 Dnah5Q8VHE6 4621 aa12.44□□□□□ -0.42
Ccdc9-201ENSMUST00000041010 Krtap14O08640 167 aa12.42□□□□□ -0.42
Ccdc9-201ENSMUST00000041010 Wfdc3Q14AE4 130 aa12.42□□□□□ -0.42
Ccdc9-201ENSMUST00000041010 Krtap13O88375 197 aa12.4□□□□□ -0.43
Ccdc9-201ENSMUST00000041010 ApobE9Q414 4505 aa12.31□□□□□ -0.44
Ccdc9-201ENSMUST00000041010 Gm2696A0A1W2P709 240 aa12.31□□□□□ -0.44
Ccdc9-201ENSMUST00000041010 Spaca4Q80ZQ0 127 aa12.29□□□□□ -0.44
Ccdc9-201ENSMUST00000041010 Dync1h1Q9JHU4 4644 aaKnown RBP12.23□□□□□ -0.45
Ccdc9-201ENSMUST00000041010 4930507D05RikQ8C9C9 103 aa12.22□□□□□ -0.45
Ccdc9-201ENSMUST00000041010 A930033H14RikG5E8X6 103 aa12.2□□□□□ -0.46
Ccdc9-201ENSMUST00000041010 Hectd4E9Q2E4 4418 aa12.18□□□□□ -0.46
Ccdc9-201ENSMUST00000041010 Krtap3-2Q9D638 99 aa12.18□□□□□ -0.46
Ccdc9-201ENSMUST00000041010 Krtap3-3Q9D7P0 99 aa12.18□□□□□ -0.46
Ccdc9-201ENSMUST00000041010 Fat1A0A1L1SQU7 4645 aa12.17□□□□□ -0.46
Ccdc9-201ENSMUST00000041010 D6Ertd527eA0A0N4SWI3 464 aa12.16□□□□□ -0.46
Ccdc9-201ENSMUST00000041010 Pkhd1E9PZ36 4059 aa12.12□□□□□ -0.47
Ccdc9-201ENSMUST00000041010 Ryr3A2AGL3 4863 aa12.12□□□□□ -0.47
Ccdc9-201ENSMUST00000041010 Stard9Q80TF6 4561 aa12.06□□□□□ -0.48
Ccdc9-201ENSMUST00000041010 Gm20537G3UYK7 97 aa12.06□□□□□ -0.48
Ccdc9-201ENSMUST00000041010 Ryr2E9Q401 4966 aaKnown RBP12.05□□□□□ -0.48
Ccdc9-201ENSMUST00000041010 Lrp1bQ9JI18 4599 aa12.04□□□□□ -0.48
Ccdc9-201ENSMUST00000041010 Gm20538F6Z9R1 75 aa12.03□□□□□ -0.48
Ccdc9-201ENSMUST00000041010 Gm3880A0A1B0GSB3 72 aa12.02□□□□□ -0.49
Ccdc9-201ENSMUST00000041010 Mp68P56379 58 aa11.96□□□□□ -0.5
Ccdc9-201ENSMUST00000041010 Gm4491E0CX42 125 aa11.95□□□□□ -0.5
Ccdc9-201ENSMUST00000041010 Romo1P60603 79 aa11.93□□□□□ -0.5
Ccdc9-201ENSMUST00000041010 Fat2Q5F226 4351 aa11.89□□□□□ -0.51
Ccdc9-201ENSMUST00000041010 Pkhd1l1Q80ZA4 4249 aa11.86□□□□□ -0.51
Ccdc9-201ENSMUST00000041010 RetnlbQ99P86 105 aa11.84□□□□□ -0.51
Ccdc9-201ENSMUST00000041010 SacsQ9JLC8 4582 aa11.83□□□□□ -0.52
Ccdc9-201ENSMUST00000041010 Cox6b2Q80ZN9 88 aa11.79□□□□□ -0.52
Ccdc9-201ENSMUST00000041010 Ryr1E9PZQ0 5035 aa11.73□□□□□ -0.53
Ccdc9-201ENSMUST00000041010 Rps29P62274 56 aa11.72□□□□□ -0.53
Ccdc9-201ENSMUST00000041010 Vps13bQ80TY5 3993 aa11.72□□□□□ -0.53
Ccdc9-201ENSMUST00000041010 CriptO70333 101 aa11.67□□□□□ -0.54
Ccdc9-201ENSMUST00000041010 Krtap19-5O08632 62 aa11.63□□□□□ -0.55
Ccdc9-201ENSMUST00000041010 Kmt2cQ8BRH4 4903 aa11.62□□□□□ -0.55
Ccdc9-201ENSMUST00000041010 Gm9955Q8CEJ8 102 aa11.61□□□□□ -0.55
Ccdc9-201ENSMUST00000041010 Dnah8Q91XQ0 4731 aa11.59□□□□□ -0.55
Ccdc9-201ENSMUST00000041010 Gm11939A2A592 99 aa11.55□□□□□ -0.56
Ccdc9-201ENSMUST00000041010 Fat3Q8BNA6 4555 aa11.44□□□□□ -0.58
Ccdc9-201ENSMUST00000041010 Lrp1Q91ZX7 4545 aaKnown RBP11.41□□□□□ -0.58
Ccdc9-201ENSMUST00000041010 Rpl37Q9D823 97 aa11.37□□□□□ -0.59
Ccdc9-201ENSMUST00000041010 Gm10382Q3V0T5 144 aa11.36□□□□□ -0.59
Ccdc9-201ENSMUST00000041010 Gm17606F6ZL36 78 aa11.26□□□□□ -0.61
Ccdc9-201ENSMUST00000041010 Abca13Q5SSE9 5034 aa11.24□□□□□ -0.61
Ccdc9-201ENSMUST00000041010 Dnhd1D3Z2X2 4750 aa11.23□□□□□ -0.61
Ccdc9-201ENSMUST00000041010 Gm5767A0A0J9YTU8 78 aa11.18□□□□□ -0.62
Ccdc9-201ENSMUST00000041010 Gm9736A0A1W2P7N1 277 aa11.16□□□□□ -0.62
Ccdc9-201ENSMUST00000041010 Birc6O88738 4882 aa11.14□□□□□ -0.63
Ccdc9-201ENSMUST00000041010 Herc2Q4U2R1 4836 aa11.11□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 115.8 ms