RNA–Protein interactions for RNA: ENSMUST00000038188.13

Limch1-201, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 1 (best) BASIC

Gene Limch1, Length 5,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-201ENSMUST00000038188 LrbaQ9ESE1 2856 aa6.01□□□□□ -1.45
Limch1-201ENSMUST00000038188 Gm9955Q8CEJ8 102 aa6.01□□□□□ -1.45
Limch1-201ENSMUST00000038188 Rpl37Q9D823 97 aa6□□□□□ -1.45
Limch1-201ENSMUST00000038188 Tenm2Q9WTS5 2764 aa6□□□□□ -1.45
Limch1-201ENSMUST00000038188 RelnQ60841 3461 aa6□□□□□ -1.45
Limch1-201ENSMUST00000038188 Tenm1Q9WTS4 2731 aa5.99□□□□□ -1.45
Limch1-201ENSMUST00000038188 BC029722A0A0N4SW31 51 aa5.98□□□□□ -1.45
Limch1-201ENSMUST00000038188 DmdP11531 3678 aa5.97□□□□□ -1.45
Limch1-201ENSMUST00000038188 Mp68P56379 58 aa5.96□□□□□ -1.45
Limch1-201ENSMUST00000038188 Gm2310J3QNJ2 377 aa5.96□□□□□ -1.46
Limch1-201ENSMUST00000038188 Akap9Q70FJ1 3797 aa5.94□□□□□ -1.46
Limch1-201ENSMUST00000038188 Uqcr11Q9CPX8 56 aa5.93□□□□□ -1.46
Limch1-201ENSMUST00000038188 Gm9736A0A1W2P7N1 277 aa5.93□□□□□ -1.46
Limch1-201ENSMUST00000038188 Muc5acE9QAQ8 3455 aa5.93□□□□□ -1.46
Limch1-201ENSMUST00000038188 Pdzd2E9Q1M1 2796 aa5.92□□□□□ -1.46
Limch1-201ENSMUST00000038188 Fam229bQ8CF36 80 aa5.9□□□□□ -1.47
Limch1-201ENSMUST00000038188 Gm37013Q8K491 104 aa5.87□□□□□ -1.47
Limch1-201ENSMUST00000038188 Gm3880A0A1B0GSB3 72 aa5.86□□□□□ -1.47
Limch1-201ENSMUST00000038188 A730071L15RikQ8C4X0 137 aa5.84□□□□□ -1.47
Limch1-201ENSMUST00000038188 Gm10643Q3URG9 111 aa5.83□□□□□ -1.48
Limch1-201ENSMUST00000038188 ApcQ61315 2845 aa5.82□□□□□ -1.48
Limch1-201ENSMUST00000038188 CriptO70333 101 aa5.81□□□□□ -1.48
Limch1-201ENSMUST00000038188 Phxr4P15974 95 aa5.8□□□□□ -1.48
Limch1-201ENSMUST00000038188 Lama5Q61001 3718 aa5.8□□□□□ -1.48
Limch1-201ENSMUST00000038188 Zfhx4Q9JJN2 3550 aa5.77□□□□□ -1.49
Limch1-201ENSMUST00000038188 Megf8P60882 2789 aa5.77□□□□□ -1.49
Limch1-201ENSMUST00000038188 Gm10337F7DEP7 55 aa5.76□□□□□ -1.49
Limch1-201ENSMUST00000038188 OtogO55225 2910 aa5.76□□□□□ -1.49
Limch1-201ENSMUST00000038188 Fbn1Q61554 2873 aaKnown RBP5.73□□□□□ -1.49
Limch1-201ENSMUST00000038188 TgO08710 2766 aa5.73□□□□□ -1.49
Limch1-201ENSMUST00000038188 Gm18596A0A1W2P860 280 aa5.73□□□□□ -1.49
Limch1-201ENSMUST00000038188 Rps28P62858 69 aaKnown RBP5.72□□□□□ -1.49
Limch1-201ENSMUST00000038188 Gm9918Q8BUR5 174 aa5.72□□□□□ -1.49
Limch1-201ENSMUST00000038188 Smg1Q8BKX6 3658 aaKnown RBP5.71□□□□□ -1.49
Limch1-201ENSMUST00000038188 Cystm1Q8K353 104 aa5.7□□□□□ -1.5
Limch1-201ENSMUST00000038188 Ank2Q8C8R3 3898 aa5.69□□□□□ -1.5
Limch1-201ENSMUST00000038188 Gm10318A0A1W2P728 225 aa5.66□□□□□ -1.5
Limch1-201ENSMUST00000038188 Krtap19-5O08632 62 aa5.66□□□□□ -1.5
Limch1-201ENSMUST00000038188 Col7a1Q63870 2944 aa5.63□□□□□ -1.51
Limch1-201ENSMUST00000038188 Crct1Q6PAI5 102 aa5.63□□□□□ -1.51
Limch1-201ENSMUST00000038188 Gm10382Q3V0T5 144 aa5.57□□□□□ -1.52
Limch1-201ENSMUST00000038188 Helz2E9QAM5 2947 aaKnown RBP5.56□□□□□ -1.52
Limch1-201ENSMUST00000038188 1700042G07RikB1AUF7 90 aa5.56□□□□□ -1.52
Limch1-201ENSMUST00000038188 VwfQ8CIZ8 2813 aa5.52□□□□□ -1.53
Limch1-201ENSMUST00000038188 Csmd1Q923L3 3564 aa5.52□□□□□ -1.53
Limch1-201ENSMUST00000038188 Cox6b2Q80ZN9 88 aa5.51□□□□□ -1.53
Limch1-201ENSMUST00000038188 Gm21887J3QQ04 176 aa5.49□□□□□ -1.53
Limch1-201ENSMUST00000038188 Prr13Q9CQJ5 137 aa5.44□□□□□ -1.54
Limch1-201ENSMUST00000038188 Gm884A2A9H6 3643 aa5.42□□□□□ -1.54
Limch1-201ENSMUST00000038188 Muc6Q80T03 2850 aa5.41□□□□□ -1.54
Limch1-201ENSMUST00000038188 Cmya5Q70KF4 3739 aa5.39□□□□□ -1.55
Limch1-201ENSMUST00000038188 Romo1P60603 79 aa5.37□□□□□ -1.55
Limch1-201ENSMUST00000038188 Huwe1Q7TMY8 4377 aaKnown RBP5.37□□□□□ -1.55
Limch1-201ENSMUST00000038188 Muc4Q8JZM8 3443 aa5.34□□□□□ -1.55
Limch1-201ENSMUST00000038188 Csmd2V9GX34 3611 aa5.33□□□□□ -1.56
Limch1-201ENSMUST00000038188 Svep1A2AVA0 3567 aa5.32□□□□□ -1.56
Limch1-201ENSMUST00000038188 Dnah14A0A140LIJ4 4489 aa5.31□□□□□ -1.56
Limch1-201ENSMUST00000038188 SpenQ62504 3644 aaKnown RBP5.31□□□□□ -1.56
Limch1-201ENSMUST00000038188 Lce1mQ9CR91 182 aa5.28□□□□□ -1.56
Limch1-201ENSMUST00000038188 Gm17416Q30KP4 66 aa5.27□□□□□ -1.57
Limch1-201ENSMUST00000038188 Gm19402J3QJV4 266 aa5.24□□□□□ -1.57
Limch1-201ENSMUST00000038188 Prm2P07978 107 aa5.2□□□□□ -1.58
Limch1-201ENSMUST00000038188 LystP97412 3788 aa5.2□□□□□ -1.58
Limch1-201ENSMUST00000038188 2310079G19RikQ9D6L6 185 aa5.19□□□□□ -1.58
Limch1-201ENSMUST00000038188 LorP18165 486 aa5.17□□□□□ -1.58
Limch1-201ENSMUST00000038188 2210017I01RikA0A0A6YVV1 95 aa5.16□□□□□ -1.58
Limch1-201ENSMUST00000038188 Sprr2kO70562 68 aa5.16□□□□□ -1.58
Limch1-201ENSMUST00000038188 TnxbO35452 4006 aa5.15□□□□□ -1.59
Limch1-201ENSMUST00000038188 B930094E09RikQ8C4T2 136 aa5.14□□□□□ -1.59
Limch1-201ENSMUST00000038188 Tnp1P10856 55 aa5.13□□□□□ -1.59
Limch1-201ENSMUST00000038188 Krtap13-1Q8K198 168 aa5.1□□□□□ -1.59
Limch1-201ENSMUST00000038188 Gm11939A2A592 99 aa5.09□□□□□ -1.6
Limch1-201ENSMUST00000038188 Gm3646F6S692 53 aa5.05□□□□□ -1.6
Limch1-201ENSMUST00000038188 4933415A04RikQ9D443 101 aa5.05□□□□□ -1.6
Limch1-201ENSMUST00000038188 PlecQ9QXS1 4691 aaKnown RBP5.01□□□□□ -1.61
Limch1-201ENSMUST00000038188 Dnah5Q8VHE6 4621 aa4.99□□□□□ -1.61
Limch1-201ENSMUST00000038188 BsnO88737 3942 aa4.98□□□□□ -1.61
Limch1-201ENSMUST00000038188 Dnah10D3YYQ8 4591 aa4.97□□□□□ -1.61
Limch1-201ENSMUST00000038188 Vps13dB1ART2 4390 aa4.97□□□□□ -1.61
Limch1-201ENSMUST00000038188 Krtap8-1O08633 61 aa4.93□□□□□ -1.62
Limch1-201ENSMUST00000038188 Gm19668J3QMD1 248 aa4.92□□□□□ -1.62
Limch1-201ENSMUST00000038188 PrkdcP97313 4128 aa4.92□□□□□ -1.62
Limch1-201ENSMUST00000038188 Stard9Q80TF6 4561 aa4.91□□□□□ -1.62
Limch1-201ENSMUST00000038188 Gm20537G3UYK7 97 aa4.9□□□□□ -1.63
Limch1-201ENSMUST00000038188 4933428G20RikQ9D3X4 101 aa4.9□□□□□ -1.63
Limch1-201ENSMUST00000038188 Prm1P02319 51 aa4.88□□□□□ -1.63
Limch1-201ENSMUST00000038188 Sprr2gO70558 76 aa4.87□□□□□ -1.63
Limch1-201ENSMUST00000038188 Dync1h1Q9JHU4 4644 aaKnown RBP4.85□□□□□ -1.63
Limch1-201ENSMUST00000038188 Dync2h1Q45VK7 4306 aa4.83□□□□□ -1.64
Limch1-201ENSMUST00000038188 Gm6358A0A087WPH4 74 aa4.83□□□□□ -1.64
Limch1-201ENSMUST00000038188 Dnah17Q69Z23 4481 aa4.82□□□□□ -1.64
Limch1-201ENSMUST00000038188 Ryr1E9PZQ0 5035 aa4.78□□□□□ -1.64
Limch1-201ENSMUST00000038188 Gm17402F6Z0L5 76 aa4.78□□□□□ -1.64
Limch1-201ENSMUST00000038188 CubnQ9JLB4 3623 aa4.77□□□□□ -1.65
Limch1-201ENSMUST00000038188 Gm40193A0A1B0GT39 78 aa4.76□□□□□ -1.65
Limch1-201ENSMUST00000038188 Pkd1O08852 4293 aa4.75□□□□□ -1.65
Limch1-201ENSMUST00000038188 Dnah6E9Q0B6 4144 aa4.75□□□□□ -1.65
Limch1-201ENSMUST00000038188 Xirp2Q4U4S6 3784 aa4.75□□□□□ -1.65
Limch1-201ENSMUST00000038188 Gm7735D3YX18 52 aa4.72□□□□□ -1.65
Limch1-201ENSMUST00000038188 Krtap19-9aF8WH65 55 aa4.72□□□□□ -1.65
Retrieved 100 of 22,080 RNA–protein pairs in 89.7 ms