RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Uqcr11Q9CPX8 56 aa7.08□□□□□ -1.28
Sdc1-201ENSMUST00000020911 Gm21798J3QNU5 87 aa7.07□□□□□ -1.28
Sdc1-201ENSMUST00000020911 Prm2P07978 107 aa7.06□□□□□ -1.28
Sdc1-201ENSMUST00000020911 Gm21887J3QQ04 176 aa7.02□□□□□ -1.29
Sdc1-201ENSMUST00000020911 Gm11627A6PWP4 55 aa7.01□□□□□ -1.29
Sdc1-201ENSMUST00000020911 Gm9507D3Z5T3 223 aa7.01□□□□□ -1.29
Sdc1-201ENSMUST00000020911 Defb9Q8R2I6 67 aa7□□□□□ -1.29
Sdc1-201ENSMUST00000020911 2310061N02RikQ9D6S9 174 aa7□□□□□ -1.29
Sdc1-201ENSMUST00000020911 Sprr1aQ62266 144 aa7□□□□□ -1.29
Sdc1-201ENSMUST00000020911 SycnQ8VCK7 134 aa6.99□□□□□ -1.29
Sdc1-201ENSMUST00000020911 Nupr2Q497P3 102 aa6.99□□□□□ -1.29
Sdc1-201ENSMUST00000020911 Wfdc10Q3V2J9 124 aa6.98□□□□□ -1.29
Sdc1-201ENSMUST00000020911 Dnah17Q69Z23 4481 aa6.95□□□□□ -1.3
Sdc1-201ENSMUST00000020911 Romo1P60603 79 aa6.95□□□□□ -1.3
Sdc1-201ENSMUST00000020911 Defb1P56386 69 aa6.94□□□□□ -1.3
Sdc1-201ENSMUST00000020911 Huwe1Q7TMY8 4377 aaKnown RBP6.93□□□□□ -1.3
Sdc1-201ENSMUST00000020911 CriptO70333 101 aa6.91□□□□□ -1.3
Sdc1-201ENSMUST00000020911 TnxbO35452 4006 aa6.9□□□□□ -1.31
Sdc1-201ENSMUST00000020911 Pla2g10Q9QXX3 151 aa6.89□□□□□ -1.31
Sdc1-201ENSMUST00000020911 PrkdcP97313 4128 aa6.89□□□□□ -1.31
Sdc1-201ENSMUST00000020911 Dnah1E9Q8T7 4250 aa6.88□□□□□ -1.31
Sdc1-201ENSMUST00000020911 Fras1Q80T14 4010 aa6.86□□□□□ -1.31
Sdc1-201ENSMUST00000020911 Ly6g6cQ9Z1Q4 126 aa6.85□□□□□ -1.31
Sdc1-201ENSMUST00000020911 Dnah11E9Q7N9 4488 aa6.85□□□□□ -1.31
Sdc1-201ENSMUST00000020911 AW011738F6S7Q2 159 aa6.85□□□□□ -1.31
Sdc1-201ENSMUST00000020911 Gm10139O88245 57 aa6.85□□□□□ -1.31
Sdc1-201ENSMUST00000020911 Dnah9B1AR51 4484 aa6.83□□□□□ -1.32
Sdc1-201ENSMUST00000020911 Krtap10-4Q08EG8 221 aa6.82□□□□□ -1.32
Sdc1-201ENSMUST00000020911 1600014C23RikQ9DAX4 101 aa6.81□□□□□ -1.32
Sdc1-201ENSMUST00000020911 Gm3880A0A1B0GSB3 72 aa6.81□□□□□ -1.32
Sdc1-201ENSMUST00000020911 Gm10999F6Q4M4 69 aa6.81□□□□□ -1.32
Sdc1-201ENSMUST00000020911 Defb11Q8R2I7 77 aa6.81□□□□□ -1.32
Sdc1-201ENSMUST00000020911 Gm10642Q3TWM1 71 aa6.8□□□□□ -1.32
Sdc1-201ENSMUST00000020911 Gm9918Q8BUR5 174 aa6.77□□□□□ -1.33
Sdc1-201ENSMUST00000020911 Defb13Q8R2I4 64 aa6.77□□□□□ -1.33
Sdc1-201ENSMUST00000020911 Adm2Q7TNK8 150 aa6.77□□□□□ -1.33
Sdc1-201ENSMUST00000020911 2310050C09RikG5E8Z3 280 aa6.75□□□□□ -1.33
Sdc1-201ENSMUST00000020911 PlecQ9QXS1 4691 aaKnown RBP6.75□□□□□ -1.33
Sdc1-201ENSMUST00000020911 Dnah5Q8VHE6 4621 aa6.75□□□□□ -1.33
Sdc1-201ENSMUST00000020911 Krtap14O08640 167 aa6.74□□□□□ -1.33
Sdc1-201ENSMUST00000020911 Anapc11Q9CPX9 84 aa6.73□□□□□ -1.33
Sdc1-201ENSMUST00000020911 Krtap10-10A0A1W2P7T6 217 aa6.71□□□□□ -1.33
Sdc1-201ENSMUST00000020911 Dync2h1Q45VK7 4306 aa6.71□□□□□ -1.33
Sdc1-201ENSMUST00000020911 Gm27235Q3UW50 83 aa6.69□□□□□ -1.34
Sdc1-201ENSMUST00000020911 Dnah7cA0A087WR13 4024 aa6.69□□□□□ -1.34
Sdc1-201ENSMUST00000020911 Gm10065F6TJM2 114 aa6.68□□□□□ -1.34
Sdc1-201ENSMUST00000020911 Wfdc3Q14AE4 130 aa6.66□□□□□ -1.34
Sdc1-201ENSMUST00000020911 Krtap29-1A2A5X4 342 aa6.64□□□□□ -1.35
Sdc1-201ENSMUST00000020911 Q8K1L6 76 aa6.63□□□□□ -1.35
Sdc1-201ENSMUST00000020911 Dnah7aE9Q0T8 4024 aa6.63□□□□□ -1.35
Sdc1-201ENSMUST00000020911 Gm20537G3UYK7 97 aa6.61□□□□□ -1.35
Sdc1-201ENSMUST00000020911 Ndufaf8A2AMZ4 74 aa6.61□□□□□ -1.35
Sdc1-201ENSMUST00000020911 NbdyA0A0N4SUI7 68 aa6.59□□□□□ -1.35
Sdc1-201ENSMUST00000020911 Krtap13O88375 197 aa6.59□□□□□ -1.35
Sdc1-201ENSMUST00000020911 Gm2696A0A1W2P709 240 aa6.58□□□□□ -1.36
Sdc1-201ENSMUST00000020911 Defb39Q70KL3 74 aa6.56□□□□□ -1.36
Sdc1-201ENSMUST00000020911 Gpr15lA0A0B4J1N3 78 aa6.55□□□□□ -1.36
Sdc1-201ENSMUST00000020911 Stard9Q80TF6 4561 aa6.54□□□□□ -1.36
Sdc1-201ENSMUST00000020911 2310079G19RikQ9D6L6 185 aa6.53□□□□□ -1.36
Sdc1-201ENSMUST00000020911 Gm16253D3Z167 63 aa6.51□□□□□ -1.37
Sdc1-201ENSMUST00000020911 Spaca4Q80ZQ0 127 aa6.51□□□□□ -1.37
Sdc1-201ENSMUST00000020911 Tnp2P11378 117 aa6.48□□□□□ -1.37
Sdc1-201ENSMUST00000020911 Vps13dB1ART2 4390 aa6.47□□□□□ -1.37
Sdc1-201ENSMUST00000020911 RetnlbQ99P86 105 aa6.41□□□□□ -1.38
Sdc1-201ENSMUST00000020911 Lrp1bQ9JI18 4599 aa6.4□□□□□ -1.38
Sdc1-201ENSMUST00000020911 Pkd1O08852 4293 aa6.4□□□□□ -1.39
Sdc1-201ENSMUST00000020911 D6Ertd527eA0A0N4SWI3 464 aa6.39□□□□□ -1.39
Sdc1-201ENSMUST00000020911 4930507D05RikQ8C9C9 103 aa6.36□□□□□ -1.39
Sdc1-201ENSMUST00000020911 Ryr3A2AGL3 4863 aa6.36□□□□□ -1.39
Sdc1-201ENSMUST00000020911 Hectd4E9Q2E4 4418 aa6.35□□□□□ -1.39
Sdc1-201ENSMUST00000020911 Gm4491E0CX42 125 aa6.33□□□□□ -1.4
Sdc1-201ENSMUST00000020911 ApobE9Q414 4505 aa6.33□□□□□ -1.4
Sdc1-201ENSMUST00000020911 Gm10382Q3V0T5 144 aa6.29□□□□□ -1.4
Sdc1-201ENSMUST00000020911 Dnah2P0C6F1 4456 aa6.28□□□□□ -1.4
Sdc1-201ENSMUST00000020911 Fat1A0A1L1SQU7 4645 aa6.27□□□□□ -1.41
Sdc1-201ENSMUST00000020911 Sec61bQ9CQS8 96 aaKnown RBP6.27□□□□□ -1.41
Sdc1-201ENSMUST00000020911 Rnase13Q5GAM7 153 aa6.26□□□□□ -1.41
Sdc1-201ENSMUST00000020911 Pkhd1E9PZ36 4059 aa6.24□□□□□ -1.41
Sdc1-201ENSMUST00000020911 Krtap3-2Q9D638 99 aa6.21□□□□□ -1.41
Sdc1-201ENSMUST00000020911 Krtap3-3Q9D7P0 99 aa6.21□□□□□ -1.41
Sdc1-201ENSMUST00000020911 Gm9112A2AI92 75 aa6.21□□□□□ -1.42
Sdc1-201ENSMUST00000020911 A930033H14RikG5E8X6 103 aa6.19□□□□□ -1.42
Sdc1-201ENSMUST00000020911 Dync1h1Q9JHU4 4644 aaKnown RBP6.18□□□□□ -1.42
Sdc1-201ENSMUST00000020911 Lrp1Q91ZX7 4545 aaKnown RBP6.16□□□□□ -1.42
Sdc1-201ENSMUST00000020911 Cox6b2Q80ZN9 88 aa6.15□□□□□ -1.42
Sdc1-201ENSMUST00000020911 Gm9955Q8CEJ8 102 aa6.15□□□□□ -1.43
Sdc1-201ENSMUST00000020911 Rpl37Q9D823 97 aa6.14□□□□□ -1.43
Sdc1-201ENSMUST00000020911 Gm17606F6ZL36 78 aa6.13□□□□□ -1.43
Sdc1-201ENSMUST00000020911 Gm5965D3Z724 196 aa6.12□□□□□ -1.43
Sdc1-201ENSMUST00000020911 Fat2Q5F226 4351 aa6.1□□□□□ -1.43
Sdc1-201ENSMUST00000020911 SacsQ9JLC8 4582 aa6.05□□□□□ -1.44
Sdc1-201ENSMUST00000020911 Ryr1E9PZQ0 5035 aa6.05□□□□□ -1.44
Sdc1-201ENSMUST00000020911 2310057N15RikQ9D6T8 200 aa6.03□□□□□ -1.44
Sdc1-201ENSMUST00000020911 Pkhd1l1Q80ZA4 4249 aa6.03□□□□□ -1.44
Sdc1-201ENSMUST00000020911 Gm19668J3QMD1 248 aa6.02□□□□□ -1.45
Sdc1-201ENSMUST00000020911 Gm9736A0A1W2P7N1 277 aa6.01□□□□□ -1.45
Sdc1-201ENSMUST00000020911 Vps13bQ80TY5 3993 aa6.01□□□□□ -1.45
Sdc1-201ENSMUST00000020911 Ryr2E9Q401 4966 aaKnown RBP6□□□□□ -1.45
Sdc1-201ENSMUST00000020911 Kmt2cQ8BRH4 4903 aa5.99□□□□□ -1.45
Sdc1-201ENSMUST00000020911 Abca13Q5SSE9 5034 aa5.96□□□□□ -1.46
Retrieved 100 of 22,080 RNA–protein pairs in 107.9 ms