RNA–Protein interactions for RNA: ENSMUST00000108362.7

Sptbn4-202, Transcript of Spectrin beta chain, mousemouse

TSL 1 (best) BASIC

Gene Sptbn4, Length 4,861 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-202ENSMUST00000108362 Gm7276Q3TYW4 209 aa10.55□□□□□ -0.72
Sptbn4-202ENSMUST00000108362 Col6a3E9PWQ3 3284 aa10.54□□□□□ -0.72
Sptbn4-202ENSMUST00000108362 Cypt15B1AXS0 87 aa10.54□□□□□ -0.72
Sptbn4-202ENSMUST00000108362 Stab1Q8R4Y4 2571 aa10.54□□□□□ -0.72
Sptbn4-202ENSMUST00000108362 NipblQ6KCD5 2798 aaKnown RBP10.52□□□□□ -0.72
Sptbn4-202ENSMUST00000108362 Fbn2Q61555 2907 aa10.51□□□□□ -0.73
Sptbn4-202ENSMUST00000108362 Dmxl1Q6PNC0 3013 aa10.5□□□□□ -0.73
Sptbn4-202ENSMUST00000108362 Defb11Q8R2I7 77 aa10.5□□□□□ -0.73
Sptbn4-202ENSMUST00000108362 Ubr5Q80TP3 2792 aa10.5□□□□□ -0.73
Sptbn4-202ENSMUST00000108362 Anapc11Q9CPX9 84 aa10.49□□□□□ -0.73
Sptbn4-202ENSMUST00000108362 Rnase13Q5GAM7 153 aa10.46□□□□□ -0.73
Sptbn4-202ENSMUST00000108362 Lelp1Q9DAE3 120 aa10.46□□□□□ -0.73
Sptbn4-202ENSMUST00000108362 Celsr3Q91ZI0 3301 aa10.44□□□□□ -0.74
Sptbn4-202ENSMUST00000108362 Defb9Q8R2I6 67 aa10.44□□□□□ -0.74
Sptbn4-202ENSMUST00000108362 Tep1P97499 2629 aa10.44□□□□□ -0.74
Sptbn4-202ENSMUST00000108362 KalrnA2CG49 2964 aa10.43□□□□□ -0.74
Sptbn4-202ENSMUST00000108362 Myo15aQ9QZZ4 3511 aa10.41□□□□□ -0.74
Sptbn4-202ENSMUST00000108362 Ash1lQ99MY8 2958 aa10.4□□□□□ -0.74
Sptbn4-202ENSMUST00000108362 Wdfy4E9Q2M9 3149 aa10.4□□□□□ -0.74
Sptbn4-202ENSMUST00000108362 Gm3233E9Q2H5 230 aa10.39□□□□□ -0.75
Sptbn4-202ENSMUST00000108362 Gm9195A0A140LHT4 2805 aa10.39□□□□□ -0.75
Sptbn4-202ENSMUST00000108362 Smim29Q8R043 75 aa10.38□□□□□ -0.75
Sptbn4-202ENSMUST00000108362 VcanQ62059 3357 aa10.38□□□□□ -0.75
Sptbn4-202ENSMUST00000108362 Dchs2A0A0A6YW72 3346 aa10.38□□□□□ -0.75
Sptbn4-202ENSMUST00000108362 BptfA2A654 3036 aaKnown RBP10.37□□□□□ -0.75
Sptbn4-202ENSMUST00000108362 FryE9Q8I9 3020 aa10.37□□□□□ -0.75
Sptbn4-202ENSMUST00000108362 Spata3Q9D9T6 193 aa10.37□□□□□ -0.75
Sptbn4-202ENSMUST00000108362 2310034C09RikQ9D746 214 aa10.35□□□□□ -0.75
Sptbn4-202ENSMUST00000108362 Gm21798J3QNU5 87 aa10.35□□□□□ -0.75
Sptbn4-202ENSMUST00000108362 Plac8Q9JI48 112 aa10.35□□□□□ -0.75
Sptbn4-202ENSMUST00000108362 Gm10320E9PW43 113 aa10.32□□□□□ -0.76
Sptbn4-202ENSMUST00000108362 Cystm1Q8K353 104 aa10.32□□□□□ -0.76
Sptbn4-202ENSMUST00000108362 Fam104aA2A6P4 185 aa10.31□□□□□ -0.76
Sptbn4-202ENSMUST00000108362 9530053A07RikE9PVG8 2581 aa10.28□□□□□ -0.76
Sptbn4-202ENSMUST00000108362 Zcchc13Q9D548 170 aa10.28□□□□□ -0.76
Sptbn4-202ENSMUST00000108362 Gm11565A2A4M7 156 aa10.27□□□□□ -0.77
Sptbn4-202ENSMUST00000108362 SpegQ62407 3262 aa10.24□□□□□ -0.77
Sptbn4-202ENSMUST00000108362 Itpr3P70227 2670 aa10.24□□□□□ -0.77
Sptbn4-202ENSMUST00000108362 Gm26620Q9CY65 116 aa10.24□□□□□ -0.77
Sptbn4-202ENSMUST00000108362 Celsr1O35161 3034 aa10.24□□□□□ -0.77
Sptbn4-202ENSMUST00000108362 Stab2Q8R4U0 2559 aa10.23□□□□□ -0.77
Sptbn4-202ENSMUST00000108362 Gm3880A0A1B0GSB3 72 aa10.23□□□□□ -0.77
Sptbn4-202ENSMUST00000108362 Pkd1l1Q8R526 2615 aa10.23□□□□□ -0.77
Sptbn4-202ENSMUST00000108362 CriptO70333 101 aa10.22□□□□□ -0.77
Sptbn4-202ENSMUST00000108362 6030445D17RikE9Q8F9 148 aa10.19□□□□□ -0.78
Sptbn4-202ENSMUST00000108362 Dmxl2Q8BPN8 3032 aa10.17□□□□□ -0.78
Sptbn4-202ENSMUST00000108362 Dchs1E9PVD3 3291 aa10.16□□□□□ -0.78
Sptbn4-202ENSMUST00000108362 Igsf10Q3V1M1 2594 aa10.15□□□□□ -0.79
Sptbn4-202ENSMUST00000108362 AW011738F6S7Q2 159 aa10.14□□□□□ -0.79
Sptbn4-202ENSMUST00000108362 Tex15F8VPN2 2785 aa10.13□□□□□ -0.79
Sptbn4-202ENSMUST00000108362 Cypt14J3QPF7 87 aa10.11□□□□□ -0.79
Sptbn4-202ENSMUST00000108362 Gm7138L7N2C3 230 aa10.11□□□□□ -0.79
Sptbn4-202ENSMUST00000108362 Gm3238W4VSP7 230 aa10.11□□□□□ -0.79
Sptbn4-202ENSMUST00000108362 Nbeal2Q6ZQA0 2742 aa10.1□□□□□ -0.79
Sptbn4-202ENSMUST00000108362 Col6a5A6H584 2640 aa10.07□□□□□ -0.8
Sptbn4-202ENSMUST00000108362 Gm20538F6Z9R1 75 aa10.06□□□□□ -0.8
Sptbn4-202ENSMUST00000108362 RelnQ60841 3461 aa10.05□□□□□ -0.8
Sptbn4-202ENSMUST00000108362 Gm7137J3QMW1 236 aa10.04□□□□□ -0.8
Sptbn4-202ENSMUST00000108362 Gm9955Q8CEJ8 102 aa10.01□□□□□ -0.81
Sptbn4-202ENSMUST00000108362 A730071L15RikQ8C4X0 137 aa10.01□□□□□ -0.81
Sptbn4-202ENSMUST00000108362 Gm3646F6S692 53 aa10.01□□□□□ -0.81
Sptbn4-202ENSMUST00000108362 Muc2Q80Z19 2680 aa10.01□□□□□ -0.81
Sptbn4-202ENSMUST00000108362 NbdyA0A0N4SUI7 68 aa10.01□□□□□ -0.81
Sptbn4-202ENSMUST00000108362 Vps13cQ8BX70 3748 aa9.99□□□□□ -0.81
Sptbn4-202ENSMUST00000108362 Pla2g10Q9QXX3 151 aa9.98□□□□□ -0.81
Sptbn4-202ENSMUST00000108362 Gm10065F6TJM2 114 aa9.96□□□□□ -0.81
Sptbn4-202ENSMUST00000108362 Gm4491E0CX42 125 aa9.94□□□□□ -0.82
Sptbn4-202ENSMUST00000108362 Gm9508A0A1W2P7W0 230 aa9.91□□□□□ -0.82
Sptbn4-202ENSMUST00000108362 Utp20Q5XG71 2788 aaKnown RBP9.91□□□□□ -0.82
Sptbn4-202ENSMUST00000108362 Gm10139O88245 57 aa9.9□□□□□ -0.82
Sptbn4-202ENSMUST00000108362 Akap9Q70FJ1 3797 aa9.89□□□□□ -0.83
Sptbn4-202ENSMUST00000108362 Gm37013Q8K491 104 aa9.88□□□□□ -0.83
Sptbn4-202ENSMUST00000108362 Odf3bQ5M8M2 238 aa9.87□□□□□ -0.83
Sptbn4-202ENSMUST00000108362 Spink7Q6IE32 76 aa9.87□□□□□ -0.83
Sptbn4-202ENSMUST00000108362 Adgrg4B7ZCC9 3073 aa9.86□□□□□ -0.83
Sptbn4-202ENSMUST00000108362 Zfhx4Q9JJN2 3550 aa9.86□□□□□ -0.83
Sptbn4-202ENSMUST00000108362 Gm9821Q8K076 103 aa9.86□□□□□ -0.83
Sptbn4-202ENSMUST00000108362 NbeaQ9EPN1 2936 aa9.85□□□□□ -0.83
Sptbn4-202ENSMUST00000108362 OxtP35454 125 aa9.83□□□□□ -0.84
Sptbn4-202ENSMUST00000108362 Hivep1Q03172 2688 aa9.82□□□□□ -0.84
Sptbn4-202ENSMUST00000108362 Sprr1aQ62266 144 aa9.82□□□□□ -0.84
Sptbn4-202ENSMUST00000108362 Gm884A2A9H6 3643 aa9.82□□□□□ -0.84
Sptbn4-202ENSMUST00000108362 DspE9Q557 2883 aaKnown RBP9.8□□□□□ -0.84
Sptbn4-202ENSMUST00000108362 Zzef1Q5SSH7 2924 aa9.79□□□□□ -0.84
Sptbn4-202ENSMUST00000108362 1700042G07RikB1AUF7 90 aa9.78□□□□□ -0.84
Sptbn4-202ENSMUST00000108362 Gm16253D3Z167 63 aa9.76□□□□□ -0.85
Sptbn4-202ENSMUST00000108362 SpenQ62504 3644 aaKnown RBP9.74□□□□□ -0.85
Sptbn4-202ENSMUST00000108362 Trank1Q8BV79 2999 aa9.74□□□□□ -0.85
Sptbn4-202ENSMUST00000108362 SmcpP15265 143 aa9.74□□□□□ -0.85
Sptbn4-202ENSMUST00000108362 4933415A04RikQ9D443 101 aa9.73□□□□□ -0.85
Sptbn4-202ENSMUST00000108362 Krtap15-1Q9QZU5 150 aa9.69□□□□□ -0.86
Sptbn4-202ENSMUST00000108362 FlncQ8VHX6 2726 aaKnown RBP9.64□□□□□ -0.87
Sptbn4-202ENSMUST00000108362 Gm36176A0A1W2P8D5 158 aa9.64□□□□□ -0.87
Sptbn4-202ENSMUST00000108362 Rpl37Q9D823 97 aa9.64□□□□□ -0.87
Sptbn4-202ENSMUST00000108362 FcgbpE9Q0B5 2583 aa9.64□□□□□ -0.87
Sptbn4-202ENSMUST00000108362 Muc5acE9QAQ8 3455 aa9.61□□□□□ -0.87
Sptbn4-202ENSMUST00000108362 Igfn1Q3KNY0 2849 aa9.61□□□□□ -0.87
Sptbn4-202ENSMUST00000108362 Smg1Q8BKX6 3658 aaKnown RBP9.58□□□□□ -0.88
Sptbn4-202ENSMUST00000108362 Romo1P60603 79 aa9.57□□□□□ -0.88
Sptbn4-202ENSMUST00000108362 Lama5Q61001 3718 aa9.55□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms