RNA–Protein interactions for RNA: ENSMUST00000078886.9

Spen-201, Transcript of Msx2-interacting protein, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Spen, Length 12,082 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Spen-201ENSMUST00000078886 Igfn1Q3KNY0 2849 aa5.34□□□□□ -1.56
Spen-201ENSMUST00000078886 Lypd5Q9D7Z7 256 aa5.34□□□□□ -1.56
Spen-201ENSMUST00000078886 Sprr1bQ62267 153 aa5.33□□□□□ -1.56
Spen-201ENSMUST00000078886 FrylF8VQ05 3007 aa5.33□□□□□ -1.56
Spen-201ENSMUST00000078886 C530025M09RikF6RGA8 229 aa5.32□□□□□ -1.56
Spen-201ENSMUST00000078886 Zzef1Q5SSH7 2924 aa5.31□□□□□ -1.56
Spen-201ENSMUST00000078886 Gm26620Q9CY65 116 aa5.3□□□□□ -1.56
Spen-201ENSMUST00000078886 Jbts17Q8CE72 3214 aa5.3□□□□□ -1.56
Spen-201ENSMUST00000078886 Gm3285A0A1W2P7U0 201 aa5.3□□□□□ -1.56
Spen-201ENSMUST00000078886 Anapc11Q9CPX9 84 aa5.29□□□□□ -1.56
Spen-201ENSMUST00000078886 FlncQ8VHX6 2726 aaKnown RBP5.29□□□□□ -1.56
Spen-201ENSMUST00000078886 6030445D17RikE9Q8F9 148 aa5.28□□□□□ -1.56
Spen-201ENSMUST00000078886 Defb11Q8R2I7 77 aa5.28□□□□□ -1.56
Spen-201ENSMUST00000078886 Cypt14J3QPF7 87 aa5.28□□□□□ -1.56
Spen-201ENSMUST00000078886 Chd7A2AJK6 2986 aaKnown RBP5.27□□□□□ -1.57
Spen-201ENSMUST00000078886 KalrnA2CG49 2964 aa5.26□□□□□ -1.57
Spen-201ENSMUST00000078886 Camk2n1Q6QWF9 78 aa5.26□□□□□ -1.57
Spen-201ENSMUST00000078886 Defb9Q8R2I6 67 aa5.24□□□□□ -1.57
Spen-201ENSMUST00000078886 Nf1Q04690 2841 aa5.23□□□□□ -1.57
Spen-201ENSMUST00000078886 Smim29Q8R043 75 aa5.23□□□□□ -1.57
Spen-201ENSMUST00000078886 Chd9Q8BYH8 2885 aa5.23□□□□□ -1.57
Spen-201ENSMUST00000078886 Hivep1Q03172 2688 aa5.23□□□□□ -1.57
Spen-201ENSMUST00000078886 Gm4491E0CX42 125 aa5.23□□□□□ -1.57
Spen-201ENSMUST00000078886 1700042G07RikB1AUF7 90 aa5.22□□□□□ -1.57
Spen-201ENSMUST00000078886 Fam104aA2A6P4 185 aa5.21□□□□□ -1.58
Spen-201ENSMUST00000078886 AW011738F6S7Q2 159 aa5.2□□□□□ -1.58
Spen-201ENSMUST00000078886 Lama2Q60675 3118 aaKnown RBP5.2□□□□□ -1.58
Spen-201ENSMUST00000078886 Romo1P60603 79 aa5.19□□□□□ -1.58
Spen-201ENSMUST00000078886 Zcchc13Q9D548 170 aa5.19□□□□□ -1.58
Spen-201ENSMUST00000078886 Gm3250E9Q1M3 230 aa5.18□□□□□ -1.58
Spen-201ENSMUST00000078886 Dmxl1Q6PNC0 3013 aa5.17□□□□□ -1.58
Spen-201ENSMUST00000078886 MgaA2AWL7 3003 aaKnown RBP5.16□□□□□ -1.58
Spen-201ENSMUST00000078886 Srrm2Q8BTI8 2703 aaKnown RBP5.15□□□□□ -1.59
Spen-201ENSMUST00000078886 TrioQ0KL02 3102 aa5.15□□□□□ -1.59
Spen-201ENSMUST00000078886 Cystm1Q8K353 104 aa5.15□□□□□ -1.59
Spen-201ENSMUST00000078886 BptfA2A654 3036 aaKnown RBP5.15□□□□□ -1.59
Spen-201ENSMUST00000078886 Odf3bQ5M8M2 238 aa5.14□□□□□ -1.59
Spen-201ENSMUST00000078886 Fam229aB2KGE5 128 aa5.13□□□□□ -1.59
Spen-201ENSMUST00000078886 Rpl37Q9D823 97 aa5.13□□□□□ -1.59
Spen-201ENSMUST00000078886 Gm10382Q3V0T5 144 aa5.12□□□□□ -1.59
Spen-201ENSMUST00000078886 Gm37013Q8K491 104 aa5.12□□□□□ -1.59
Spen-201ENSMUST00000078886 Myo15bI7HPW8 3033 aa5.12□□□□□ -1.59
Spen-201ENSMUST00000078886 Ranbp2Q9ERU9 3053 aaKnown RBP5.11□□□□□ -1.59
Spen-201ENSMUST00000078886 FcgbpE9Q0B5 2583 aa5.11□□□□□ -1.59
Spen-201ENSMUST00000078886 FryE9Q8I9 3020 aa5.1□□□□□ -1.59
Spen-201ENSMUST00000078886 Ndufaf8A2AMZ4 74 aa5.1□□□□□ -1.59
Spen-201ENSMUST00000078886 LrbaQ9ESE1 2856 aa5.09□□□□□ -1.59
Spen-201ENSMUST00000078886 Plac8Q9JI48 112 aa5.09□□□□□ -1.59
Spen-201ENSMUST00000078886 4933415A04RikQ9D443 101 aa5.09□□□□□ -1.6
Spen-201ENSMUST00000078886 Gm10320E9PW43 113 aa5.08□□□□□ -1.6
Spen-201ENSMUST00000078886 Vps13aQ5H8C4 3166 aa5.06□□□□□ -1.6
Spen-201ENSMUST00000078886 NbdyA0A0N4SUI7 68 aa5.06□□□□□ -1.6
Spen-201ENSMUST00000078886 Pdzd2E9Q1M1 2796 aa5.05□□□□□ -1.6
Spen-201ENSMUST00000078886 Gm9112A2AI92 75 aa5.04□□□□□ -1.6
Spen-201ENSMUST00000078886 TgO08710 2766 aa5.04□□□□□ -1.6
Spen-201ENSMUST00000078886 Sec61bQ9CQS8 96 aaKnown RBP5.04□□□□□ -1.6
Spen-201ENSMUST00000078886 Tenm1Q9WTS4 2731 aa5.03□□□□□ -1.6
Spen-201ENSMUST00000078886 Celsr2Q9R0M0 2920 aa5.03□□□□□ -1.6
Spen-201ENSMUST00000078886 Gm10065F6TJM2 114 aa5.01□□□□□ -1.61
Spen-201ENSMUST00000078886 AtmQ62388 3066 aa5□□□□□ -1.61
Spen-201ENSMUST00000078886 NbeaQ9EPN1 2936 aa5□□□□□ -1.61
Spen-201ENSMUST00000078886 Krtap15-1Q9QZU5 150 aa4.99□□□□□ -1.61
Spen-201ENSMUST00000078886 OxtP35454 125 aa4.99□□□□□ -1.61
Spen-201ENSMUST00000078886 Frem2Q6NVD0 3160 aa4.98□□□□□ -1.61
Spen-201ENSMUST00000078886 Gm10139O88245 57 aa4.98□□□□□ -1.61
Spen-201ENSMUST00000078886 Gm7173A0A0G2JEB6 3132 aa4.97□□□□□ -1.61
Spen-201ENSMUST00000078886 Cfap54Q8C6S9 3106 aa4.97□□□□□ -1.61
Spen-201ENSMUST00000078886 A730071L15RikQ8C4X0 137 aa4.97□□□□□ -1.61
Spen-201ENSMUST00000078886 Gm3233E9Q2H5 230 aa4.96□□□□□ -1.62
Spen-201ENSMUST00000078886 Trank1Q8BV79 2999 aa4.94□□□□□ -1.62
Spen-201ENSMUST00000078886 Mki67E9PVX6 3177 aaKnown RBP4.94□□□□□ -1.62
Spen-201ENSMUST00000078886 Tenm3Q9WTS6 2715 aa4.93□□□□□ -1.62
Spen-201ENSMUST00000078886 Dmxl2Q8BPN8 3032 aa4.92□□□□□ -1.62
Spen-201ENSMUST00000078886 Cox6b2Q80ZN9 88 aa4.92□□□□□ -1.62
Spen-201ENSMUST00000078886 Gm19426M0QWC7 77 aa4.91□□□□□ -1.62
Spen-201ENSMUST00000078886 BC029722A0A0N4SW31 51 aa4.9□□□□□ -1.62
Spen-201ENSMUST00000078886 Lama1P19137 3084 aa4.9□□□□□ -1.62
Spen-201ENSMUST00000078886 Wdfy4E9Q2M9 3149 aa4.9□□□□□ -1.62
Spen-201ENSMUST00000078886 Sprr1aQ62266 144 aa4.9□□□□□ -1.62
Spen-201ENSMUST00000078886 2310050C09RikG5E8Z3 280 aa4.89□□□□□ -1.63
Spen-201ENSMUST00000078886 Gm16253D3Z167 63 aa4.89□□□□□ -1.63
Spen-201ENSMUST00000078886 Gm7138L7N2C3 230 aa4.88□□□□□ -1.63
Spen-201ENSMUST00000078886 SmcpP15265 143 aa4.88□□□□□ -1.63
Spen-201ENSMUST00000078886 Gm3238W4VSP7 230 aa4.88□□□□□ -1.63
Spen-201ENSMUST00000078886 Usp34Q6ZQ93 3582 aa4.87□□□□□ -1.63
Spen-201ENSMUST00000078886 HttP42859 3119 aa4.85□□□□□ -1.63
Spen-201ENSMUST00000078886 Celsr1O35161 3034 aa4.85□□□□□ -1.63
Spen-201ENSMUST00000078886 Lelp1Q9DAE3 120 aa4.84□□□□□ -1.64
Spen-201ENSMUST00000078886 UtrnE9Q6R7 3430 aa4.83□□□□□ -1.64
Spen-201ENSMUST00000078886 Gm17349F7BGH6 99 aa4.83□□□□□ -1.64
Spen-201ENSMUST00000078886 Krtap14O08640 167 aa4.82□□□□□ -1.64
Spen-201ENSMUST00000078886 Rev3lQ61493 3122 aa4.81□□□□□ -1.64
Spen-201ENSMUST00000078886 Gm11565A2A4M7 156 aa4.81□□□□□ -1.64
Spen-201ENSMUST00000078886 Col12a1Q60847 3120 aa4.8□□□□□ -1.64
Spen-201ENSMUST00000078886 Gm9508A0A1W2P7W0 230 aa4.8□□□□□ -1.64
Spen-201ENSMUST00000078886 Gm5767A0A0J9YTU8 78 aa4.79□□□□□ -1.64
Spen-201ENSMUST00000078886 AspmQ8CJ27 3122 aa4.78□□□□□ -1.64
Spen-201ENSMUST00000078886 Gm7137J3QMW1 236 aa4.77□□□□□ -1.65
Spen-201ENSMUST00000078886 Ank2Q8C8R3 3898 aa4.77□□□□□ -1.65
Spen-201ENSMUST00000078886 Gm21887J3QQ04 176 aa4.77□□□□□ -1.65
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms