RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Gm12353A2AGJ4 60 aa6.39□□□□□ -1.39
Pcdh1-201ENSMUST00000057185 AplnQ9R0R4 77 aa6.39□□□□□ -1.39
Pcdh1-201ENSMUST00000057185 A530084C06RikQ3UTW2 186 aa6.39□□□□□ -1.39
Pcdh1-201ENSMUST00000057185 Ighv2-2A0A075B5P8 116 aa6.38□□□□□ -1.39
Pcdh1-201ENSMUST00000057185 P01821 116 aa6.38□□□□□ -1.39
Pcdh1-201ENSMUST00000057185 Spata3Q9D9T6 193 aa6.38□□□□□ -1.39
Pcdh1-201ENSMUST00000057185 Igkv3-5A0A140T8M6 119 aa6.38□□□□□ -1.39
Pcdh1-201ENSMUST00000057185 UqcrqQ9CQ69 82 aa6.37□□□□□ -1.39
Pcdh1-201ENSMUST00000057185 Gm10267M0QWD8 85 aa6.37□□□□□ -1.39
Pcdh1-201ENSMUST00000057185 Dmac1Q9CQ00 111 aa6.37□□□□□ -1.39
Pcdh1-201ENSMUST00000057185 Ank2Q8C8R3 3898 aa6.36□□□□□ -1.39
Pcdh1-201ENSMUST00000057185 Gm16181B0V2H2 73 aa6.36□□□□□ -1.39
Pcdh1-201ENSMUST00000057185 Gm21886J3QJU9 214 aa6.36□□□□□ -1.39
Pcdh1-201ENSMUST00000057185 1700074P13RikQ9D9G7 251 aa6.36□□□□□ -1.39
Pcdh1-201ENSMUST00000057185 A730071L15RikQ8C4X0 137 aa6.35□□□□□ -1.39
Pcdh1-201ENSMUST00000057185 BsnO88737 3942 aa6.35□□□□□ -1.39
Pcdh1-201ENSMUST00000057185 A0A286YE49 62 aa6.35□□□□□ -1.39
Pcdh1-201ENSMUST00000057185 Wfdc6bF6ULY1 148 aa6.35□□□□□ -1.39
Pcdh1-201ENSMUST00000057185 Atox1O08997 68 aaKnown RBP6.35□□□□□ -1.39
Pcdh1-201ENSMUST00000057185 Igkv3-4A0A140T8Q4 119 aa6.34□□□□□ -1.39
Pcdh1-201ENSMUST00000057185 Coa6Q8BGD8 79 aa6.34□□□□□ -1.39
Pcdh1-201ENSMUST00000057185 Igkv8-19A0A0G2JFN8 121 aa6.34□□□□□ -1.39
Pcdh1-201ENSMUST00000057185 Wfdc10Q3V2J9 124 aa6.34□□□□□ -1.39
Pcdh1-201ENSMUST00000057185 Gm28230A0A0A0MQ91 144 aa6.33□□□□□ -1.4
Pcdh1-201ENSMUST00000057185 Phxr5P08399 672 aa6.33□□□□□ -1.4
Pcdh1-201ENSMUST00000057185 Gm10197F6QEY5 67 aa6.33□□□□□ -1.4
Pcdh1-201ENSMUST00000057185 Gm11627A6PWP4 55 aa6.32□□□□□ -1.4
Pcdh1-201ENSMUST00000057185 Rpl37aP61514 92 aa6.32□□□□□ -1.4
Pcdh1-201ENSMUST00000057185 Nupr2Q497P3 102 aa6.32□□□□□ -1.4
Pcdh1-201ENSMUST00000057185 Gm10337F7DEP7 55 aa6.32□□□□□ -1.4
Pcdh1-201ENSMUST00000057185 Igkv3-7A0A0G2JE31 119 aa6.31□□□□□ -1.4
Pcdh1-201ENSMUST00000057185 P84750 121 aa6.31□□□□□ -1.4
Pcdh1-201ENSMUST00000057185 Igkv3-10A0A0G2JGN0 119 aa6.31□□□□□ -1.4
Pcdh1-201ENSMUST00000057185 Q8BT88 171 aa6.3□□□□□ -1.4
Pcdh1-201ENSMUST00000057185 Phf5aP83870 110 aaKnown RBP6.29□□□□□ -1.4
Pcdh1-201ENSMUST00000057185 VwfQ8CIZ8 2813 aa6.28□□□□□ -1.4
Pcdh1-201ENSMUST00000057185 Gm7276Q3TYW4 209 aa6.28□□□□□ -1.4
Pcdh1-201ENSMUST00000057185 H2al1aQ5M8Q2 105 aa6.28□□□□□ -1.4
Pcdh1-201ENSMUST00000057185 TgO08710 2766 aa6.27□□□□□ -1.41
Pcdh1-201ENSMUST00000057185 Spint4Q9D263 159 aa6.26□□□□□ -1.41
Pcdh1-201ENSMUST00000057185 Gm10837Q3UTT8 145 aa6.26□□□□□ -1.41
Pcdh1-201ENSMUST00000057185 A930002H24RikQ8C8Y3 163 aa6.25□□□□□ -1.41
Pcdh1-201ENSMUST00000057185 Prol1E9PYQ4 312 aa6.25□□□□□ -1.41
Pcdh1-201ENSMUST00000057185 U90926O08546 118 aa6.25□□□□□ -1.41
Pcdh1-201ENSMUST00000057185 Gm9508A0A1W2P7W0 230 aa6.24□□□□□ -1.41
Pcdh1-201ENSMUST00000057185 Gm4707V9GXN5 68 aa6.24□□□□□ -1.41
Pcdh1-201ENSMUST00000057185 Defb11Q8R2I7 77 aa6.23□□□□□ -1.41
Pcdh1-201ENSMUST00000057185 Gm10642Q3TWM1 71 aa6.23□□□□□ -1.41
Pcdh1-201ENSMUST00000057185 SptssbQ925E8 76 aa6.22□□□□□ -1.41
Pcdh1-201ENSMUST00000057185 9230102O04RikA2ASX7 82 aa6.21□□□□□ -1.42
Pcdh1-201ENSMUST00000057185 Coa5Q99M07 74 aa6.21□□□□□ -1.42
Pcdh1-201ENSMUST00000057185 1600014C23RikQ9DAX4 101 aa6.21□□□□□ -1.42
Pcdh1-201ENSMUST00000057185 Hspg2Q05793 3707 aaKnown RBP6.2□□□□□ -1.42
Pcdh1-201ENSMUST00000057185 H2al1bA0A087WP11 105 aa6.2□□□□□ -1.42
Pcdh1-201ENSMUST00000057185 Defb13Q8R2I4 64 aa6.2□□□□□ -1.42
Pcdh1-201ENSMUST00000057185 Adm2Q7TNK8 150 aa6.19□□□□□ -1.42
Pcdh1-201ENSMUST00000057185 Wfdc3Q14AE4 130 aa6.19□□□□□ -1.42
Pcdh1-201ENSMUST00000057185 Megf8P60882 2789 aa6.18□□□□□ -1.42
Pcdh1-201ENSMUST00000057185 Cdc42se1Q8BHL7 80 aa6.17□□□□□ -1.42
Pcdh1-201ENSMUST00000057185 H2al1eQ810S6 105 aa6.16□□□□□ -1.42
Pcdh1-201ENSMUST00000057185 AI606181Q8C7B9 129 aa6.16□□□□□ -1.42
Pcdh1-201ENSMUST00000057185 Plac8Q9JI48 112 aa6.16□□□□□ -1.42
Pcdh1-201ENSMUST00000057185 Gm20604F8WIA3 75 aa6.15□□□□□ -1.42
Pcdh1-201ENSMUST00000057185 Chchd10Q7TNL9 138 aa6.15□□□□□ -1.43
Pcdh1-201ENSMUST00000057185 Igkv3-3A0A140T8Q0 119 aa6.14□□□□□ -1.43
Pcdh1-201ENSMUST00000057185 Anapc11Q9CPX9 84 aa6.14□□□□□ -1.43
Pcdh1-201ENSMUST00000057185 Sprr1aQ62266 144 aa6.13□□□□□ -1.43
Pcdh1-201ENSMUST00000057185 Defb39Q70KL3 74 aa6.13□□□□□ -1.43
Pcdh1-201ENSMUST00000057185 Defb9Q8R2I6 67 aa6.13□□□□□ -1.43
Pcdh1-201ENSMUST00000057185 Zcchc13Q9D548 170 aa6.13□□□□□ -1.43
Pcdh1-201ENSMUST00000057185 Fam104aA2A6P4 185 aa6.12□□□□□ -1.43
Pcdh1-201ENSMUST00000057185 Gm10160F6Y577 67 aa6.12□□□□□ -1.43
Pcdh1-201ENSMUST00000057185 Gm28374F6SG70 93 aa6.11□□□□□ -1.43
Pcdh1-201ENSMUST00000057185 Chtf8P0CG14 533 aa6.11□□□□□ -1.43
Pcdh1-201ENSMUST00000057185 H2al1kJ3QP08 105 aa6.11□□□□□ -1.43
Pcdh1-201ENSMUST00000057185 Q8K1L6 76 aa6.11□□□□□ -1.43
Pcdh1-201ENSMUST00000057185 H2al1mQ9DAD9 105 aa6.11□□□□□ -1.43
Pcdh1-201ENSMUST00000057185 Bean1Q9EQG5 255 aa6.1□□□□□ -1.43
Pcdh1-201ENSMUST00000057185 Ndufs5Q99LY9 106 aa6.09□□□□□ -1.43
Pcdh1-201ENSMUST00000057185 Ly6g6cQ9Z1Q4 126 aa6.09□□□□□ -1.43
Pcdh1-201ENSMUST00000057185 Sox16Q62247 57 aa6.07□□□□□ -1.44
Pcdh1-201ENSMUST00000057185 Gm27235Q3UW50 83 aa6.06□□□□□ -1.44
Pcdh1-201ENSMUST00000057185 Gm17349F7BGH6 99 aa6.06□□□□□ -1.44
Pcdh1-201ENSMUST00000057185 Muc6Q80T03 2850 aa6.05□□□□□ -1.44
Pcdh1-201ENSMUST00000057185 Odf3bQ5M8M2 238 aa6.04□□□□□ -1.44
Pcdh1-201ENSMUST00000057185 Znf706Q9D115 76 aaKnown RBP6.04□□□□□ -1.44
Pcdh1-201ENSMUST00000057185 Phxr4P15974 95 aa6.04□□□□□ -1.44
Pcdh1-201ENSMUST00000057185 Gm20661K7N787 53 aa6.03□□□□□ -1.44
Pcdh1-201ENSMUST00000057185 Ccdc179J3QM76 67 aa6.02□□□□□ -1.45
Pcdh1-201ENSMUST00000057185 Spaca4Q80ZQ0 127 aa6.02□□□□□ -1.45
Pcdh1-201ENSMUST00000057185 Tenm2Q9WTS5 2764 aa6.02□□□□□ -1.45
Pcdh1-201ENSMUST00000057185 Gm10139O88245 57 aa6.02□□□□□ -1.45
Pcdh1-201ENSMUST00000057185 Gm9507D3Z5T3 223 aa6□□□□□ -1.45
Pcdh1-201ENSMUST00000057185 Ndufb1P0DN34 57 aa6□□□□□ -1.45
Pcdh1-201ENSMUST00000057185 2310061N02RikQ9D6S9 174 aa6□□□□□ -1.45
Pcdh1-201ENSMUST00000057185 6030445D17RikE9Q8F9 148 aa5.99□□□□□ -1.45
Pcdh1-201ENSMUST00000057185 Gm10999F6Q4M4 69 aa5.97□□□□□ -1.45
Pcdh1-201ENSMUST00000057185 Defb1P56386 69 aa5.95□□□□□ -1.46
Pcdh1-201ENSMUST00000057185 Gm37013Q8K491 104 aa5.95□□□□□ -1.46
Pcdh1-201ENSMUST00000057185 Gpr15lA0A0B4J1N3 78 aa5.94□□□□□ -1.46
Retrieved 100 of 22,080 RNA–protein pairs in 835.2 ms