RNA–Protein interactions for RNA: ENSMUST00000028386.11

Nckap1-201, Transcript of Nck-associated protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nckap1, Length 4,469 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1-201ENSMUST00000028386 Trank1Q8BV79 2999 aa13.9□□□□□ -0.18
Nckap1-201ENSMUST00000028386 Gm17689B3GLJ4 109 aa13.9□□□□□ -0.18
Nckap1-201ENSMUST00000028386 Gm10570F6VB42 170 aa13.89□□□□□ -0.19
Nckap1-201ENSMUST00000028386 Sprr1bQ62267 153 aa13.89□□□□□ -0.19
Nckap1-201ENSMUST00000028386 4930518I15RikQ3V2W7 57 aa13.88□□□□□ -0.19
Nckap1-201ENSMUST00000028386 Nf1Q04690 2841 aa13.88□□□□□ -0.19
Nckap1-201ENSMUST00000028386 Rpl37aP61514 92 aa13.87□□□□□ -0.19
Nckap1-201ENSMUST00000028386 Ighv2-2A0A075B5P8 116 aa13.83□□□□□ -0.2
Nckap1-201ENSMUST00000028386 P01821 116 aa13.83□□□□□ -0.2
Nckap1-201ENSMUST00000028386 Igkv8-19A0A0G2JFN8 121 aa13.82□□□□□ -0.2
Nckap1-201ENSMUST00000028386 Ndufb1P0DN34 57 aa13.82□□□□□ -0.2
Nckap1-201ENSMUST00000028386 RelnQ60841 3461 aa13.8□□□□□ -0.2
Nckap1-201ENSMUST00000028386 Serp1Q9Z1W5 66 aa13.8□□□□□ -0.2
Nckap1-201ENSMUST00000028386 Gm27235Q3UW50 83 aa13.78□□□□□ -0.2
Nckap1-201ENSMUST00000028386 Gm36176A0A1W2P8D5 158 aa13.77□□□□□ -0.21
Nckap1-201ENSMUST00000028386 9230102O04RikA2ASX7 82 aa13.76□□□□□ -0.21
Nckap1-201ENSMUST00000028386 LrbaQ9ESE1 2856 aa13.74□□□□□ -0.21
Nckap1-201ENSMUST00000028386 Sox16Q62247 57 aa13.73□□□□□ -0.21
Nckap1-201ENSMUST00000028386 Myo15aQ9QZZ4 3511 aa13.73□□□□□ -0.21
Nckap1-201ENSMUST00000028386 Gm10160F6Y577 67 aa13.72□□□□□ -0.21
Nckap1-201ENSMUST00000028386 Phxr5P08399 672 aa13.72□□□□□ -0.21
Nckap1-201ENSMUST00000028386 Anapc11Q9CPX9 84 aa13.72□□□□□ -0.21
Nckap1-201ENSMUST00000028386 Defb9Q8R2I6 67 aa13.71□□□□□ -0.21
Nckap1-201ENSMUST00000028386 Gm10197F6QEY5 67 aa13.71□□□□□ -0.22
Nckap1-201ENSMUST00000028386 Gm10308Q9CVR5 141 aa13.7□□□□□ -0.22
Nckap1-201ENSMUST00000028386 Bean1Q9EQG5 255 aa13.7□□□□□ -0.22
Nckap1-201ENSMUST00000028386 Smim29Q8R043 75 aa13.68□□□□□ -0.22
Nckap1-201ENSMUST00000028386 A330070K13RikQ8CA53 115 aa13.67□□□□□ -0.22
Nckap1-201ENSMUST00000028386 Krtap16-1A2A5X5 502 aa13.67□□□□□ -0.22
Nckap1-201ENSMUST00000028386 Gm10999F6Q4M4 69 aa13.67□□□□□ -0.22
Nckap1-201ENSMUST00000028386 7530416G11RikJ3QJX6 159 aa13.65□□□□□ -0.22
Nckap1-201ENSMUST00000028386 H2al1mQ9DAD9 105 aa13.65□□□□□ -0.22
Nckap1-201ENSMUST00000028386 A930002H24RikQ8C8Y3 163 aa13.64□□□□□ -0.23
Nckap1-201ENSMUST00000028386 Gm11213A0A1B0GR83 88 aa13.62□□□□□ -0.23
Nckap1-201ENSMUST00000028386 Wdfy3Q6VNB8 3508 aa13.62□□□□□ -0.23
Nckap1-201ENSMUST00000028386 FcgbpE9Q0B5 2583 aa13.59□□□□□ -0.23
Nckap1-201ENSMUST00000028386 H2al1kJ3QP08 105 aa13.58□□□□□ -0.23
Nckap1-201ENSMUST00000028386 Tenm4Q3UHK6 2771 aa13.56□□□□□ -0.24
Nckap1-201ENSMUST00000028386 CnbpP53996 178 aaKnown RBP13.56□□□□□ -0.24
Nckap1-201ENSMUST00000028386 AW011738F6S7Q2 159 aa13.56□□□□□ -0.24
Nckap1-201ENSMUST00000028386 Gm7276Q3TYW4 209 aa13.54□□□□□ -0.24
Nckap1-201ENSMUST00000028386 Pdzd2E9Q1M1 2796 aa13.53□□□□□ -0.24
Nckap1-201ENSMUST00000028386 Gm10337F7DEP7 55 aa13.53□□□□□ -0.24
Nckap1-201ENSMUST00000028386 Prr13Q9CQJ5 137 aa13.53□□□□□ -0.24
Nckap1-201ENSMUST00000028386 Gm9508A0A1W2P7W0 230 aa13.48□□□□□ -0.25
Nckap1-201ENSMUST00000028386 A530084C06RikQ3UTW2 186 aa13.48□□□□□ -0.25
Nckap1-201ENSMUST00000028386 Defb1P56386 69 aa13.47□□□□□ -0.25
Nckap1-201ENSMUST00000028386 Spint4Q9D263 159 aa13.47□□□□□ -0.25
Nckap1-201ENSMUST00000028386 Q8BGJ3 129 aa13.45□□□□□ -0.26
Nckap1-201ENSMUST00000028386 Tenm3Q9WTS6 2715 aa13.45□□□□□ -0.26
Nckap1-201ENSMUST00000028386 Gm10320E9PW43 113 aa13.45□□□□□ -0.26
Nckap1-201ENSMUST00000028386 Gm17349F7BGH6 99 aa13.43□□□□□ -0.26
Nckap1-201ENSMUST00000028386 OxtP35454 125 aa13.42□□□□□ -0.26
Nckap1-201ENSMUST00000028386 Zcchc13Q9D548 170 aa13.41□□□□□ -0.26
Nckap1-201ENSMUST00000028386 Helz2E9QAM5 2947 aaKnown RBP13.41□□□□□ -0.26
Nckap1-201ENSMUST00000028386 Fam104aA2A6P4 185 aa13.38□□□□□ -0.27
Nckap1-201ENSMUST00000028386 Fam229bQ8CF36 80 aa13.38□□□□□ -0.27
Nckap1-201ENSMUST00000028386 Cypt15B1AXS0 87 aa13.38□□□□□ -0.27
Nckap1-201ENSMUST00000028386 Gm17606F6ZL36 78 aa13.35□□□□□ -0.27
Nckap1-201ENSMUST00000028386 ApcQ61315 2845 aa13.34□□□□□ -0.27
Nckap1-201ENSMUST00000028386 Akap9Q70FJ1 3797 aa13.32□□□□□ -0.28
Nckap1-201ENSMUST00000028386 Srrm2Q8BTI8 2703 aaKnown RBP13.32□□□□□ -0.28
Nckap1-201ENSMUST00000028386 Coa5Q99M07 74 aa13.31□□□□□ -0.28
Nckap1-201ENSMUST00000028386 Muc5acE9QAQ8 3455 aa13.3□□□□□ -0.28
Nckap1-201ENSMUST00000028386 DmdP11531 3678 aa13.29□□□□□ -0.28
Nckap1-201ENSMUST00000028386 Gm20661K7N787 53 aa13.28□□□□□ -0.28
Nckap1-201ENSMUST00000028386 4930507D05RikQ8C9C9 103 aa13.27□□□□□ -0.28
Nckap1-201ENSMUST00000028386 Rps28P62858 69 aaKnown RBP13.25□□□□□ -0.29
Nckap1-201ENSMUST00000028386 TgO08710 2766 aa13.22□□□□□ -0.29
Nckap1-201ENSMUST00000028386 Gm10065F6TJM2 114 aa13.19□□□□□ -0.3
Nckap1-201ENSMUST00000028386 Cdc42se1Q8BHL7 80 aa13.18□□□□□ -0.3
Nckap1-201ENSMUST00000028386 NbdyA0A0N4SUI7 68 aa13.17□□□□□ -0.3
Nckap1-201ENSMUST00000028386 Chtf8P0CG14 533 aa13.16□□□□□ -0.3
Nckap1-201ENSMUST00000028386 Limd2Q8BGB5 128 aa13.11□□□□□ -0.31
Nckap1-201ENSMUST00000028386 Sprr1aQ62266 144 aa13.09□□□□□ -0.31
Nckap1-201ENSMUST00000028386 Gm9507D3Z5T3 223 aa13.07□□□□□ -0.32
Nckap1-201ENSMUST00000028386 6030445D17RikE9Q8F9 148 aa13.06□□□□□ -0.32
Nckap1-201ENSMUST00000028386 Cypt14J3QPF7 87 aa13.06□□□□□ -0.32
Nckap1-201ENSMUST00000028386 Cystm1Q8K353 104 aa13.01□□□□□ -0.33
Nckap1-201ENSMUST00000028386 Phxr4P15974 95 aa13□□□□□ -0.33
Nckap1-201ENSMUST00000028386 Gm26620Q9CY65 116 aa13□□□□□ -0.33
Nckap1-201ENSMUST00000028386 Tenm1Q9WTS4 2731 aa12.98□□□□□ -0.33
Nckap1-201ENSMUST00000028386 OtogO55225 2910 aa12.98□□□□□ -0.33
Nckap1-201ENSMUST00000028386 Krtap10-4Q08EG8 221 aa12.92□□□□□ -0.34
Nckap1-201ENSMUST00000028386 A730071L15RikQ8C4X0 137 aa12.92□□□□□ -0.34
Nckap1-201ENSMUST00000028386 Gm10139O88245 57 aa12.92□□□□□ -0.34
Nckap1-201ENSMUST00000028386 2310034C09RikQ9D746 214 aa12.9□□□□□ -0.34
Nckap1-201ENSMUST00000028386 Gm12216A0A1W2P827 62 aa12.9□□□□□ -0.34
Nckap1-201ENSMUST00000028386 Odf3bQ5M8M2 238 aa12.9□□□□□ -0.34
Nckap1-201ENSMUST00000028386 Vps13cQ8BX70 3748 aa12.9□□□□□ -0.35
Nckap1-201ENSMUST00000028386 Krtap13O88375 197 aa12.88□□□□□ -0.35
Nckap1-201ENSMUST00000028386 SpenQ62504 3644 aaKnown RBP12.83□□□□□ -0.36
Nckap1-201ENSMUST00000028386 Zfhx3Q61329 3726 aa12.82□□□□□ -0.36
Nckap1-201ENSMUST00000028386 Rnase13Q5GAM7 153 aa12.81□□□□□ -0.36
Nckap1-201ENSMUST00000028386 Smg1Q8BKX6 3658 aaKnown RBP12.79□□□□□ -0.36
Nckap1-201ENSMUST00000028386 2310050C09RikG5E8Z3 280 aa12.78□□□□□ -0.36
Nckap1-201ENSMUST00000028386 Uqcr11Q9CPX8 56 aa12.75□□□□□ -0.37
Nckap1-201ENSMUST00000028386 Csmd1Q923L3 3564 aa12.75□□□□□ -0.37
Nckap1-201ENSMUST00000028386 2310061N02RikQ9D6S9 174 aa12.73□□□□□ -0.37
Nckap1-201ENSMUST00000028386 Zfhx4Q9JJN2 3550 aa12.71□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 51 ms