RNA–Protein interactions for RNA: ENSMUST00000210774.1

Ebf3-208, Transcript of Transcription factor COE3, mousemouse

TSL 1 (best) BASIC

Gene Ebf3, Length 2,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-208ENSMUST00000210774 Defb2P82020 71 aa10.08□□□□□ -0.8
Ebf3-208ENSMUST00000210774 Defb26Q30KN7 186 aa10.08□□□□□ -0.8
Ebf3-208ENSMUST00000210774 Trav14-1A0A0G2JF94 121 aa10.08□□□□□ -0.8
Ebf3-208ENSMUST00000210774 Gm9805F6YK59 57 aa10.08□□□□□ -0.8
Ebf3-208ENSMUST00000210774 Reg3dQ9QUS9 175 aa10.08□□□□□ -0.8
Ebf3-208ENSMUST00000210774 Msrb1Q9JLC3 116 aa10.06□□□□□ -0.8
Ebf3-208ENSMUST00000210774 Igkv3-10A0A0G2JGN0 119 aa10.06□□□□□ -0.8
Ebf3-208ENSMUST00000210774 Gm3233E9Q2H5 230 aa10.06□□□□□ -0.8
Ebf3-208ENSMUST00000210774 Ighv2-5A0A0A6YY69 116 aa10.05□□□□□ -0.8
Ebf3-208ENSMUST00000210774 Ccdc179J3QM76 67 aa10.05□□□□□ -0.8
Ebf3-208ENSMUST00000210774 A330070K13RikQ8CA53 115 aa10.05□□□□□ -0.8
Ebf3-208ENSMUST00000210774 Ank2Q8C8R3 3898 aa10.04□□□□□ -0.8
Ebf3-208ENSMUST00000210774 Gm3443F7CCV5 94 aa10.04□□□□□ -0.8
Ebf3-208ENSMUST00000210774 Igkv8-34A0A0G2JDU0 121 aa10.03□□□□□ -0.8
Ebf3-208ENSMUST00000210774 Igkv8-28A0A0G2JE47 121 aa10.02□□□□□ -0.81
Ebf3-208ENSMUST00000210774 Gm9767G3X930 207 aa10.02□□□□□ -0.81
Ebf3-208ENSMUST00000210774 CrygfQ9CXV3 174 aa10.02□□□□□ -0.81
Ebf3-208ENSMUST00000210774 CicQ924A2 2510 aa10.02□□□□□ -0.81
Ebf3-208ENSMUST00000210774 Defb42Q8BVB5 75 aa10.01□□□□□ -0.81
Ebf3-208ENSMUST00000210774 AI606181Q8C7B9 129 aa10.01□□□□□ -0.81
Ebf3-208ENSMUST00000210774 Tenm4Q3UHK6 2771 aa10.01□□□□□ -0.81
Ebf3-208ENSMUST00000210774 A0A286YCN5 57 aa10.01□□□□□ -0.81
Ebf3-208ENSMUST00000210774 Stab1Q8R4Y4 2571 aa10□□□□□ -0.81
Ebf3-208ENSMUST00000210774 Igkv4-61A0A0G2JH00 117 aa10□□□□□ -0.81
Ebf3-208ENSMUST00000210774 Nbeal2Q6ZQA0 2742 aa9.99□□□□□ -0.81
Ebf3-208ENSMUST00000210774 Trav9n-4A0A075B631 113 aa9.99□□□□□ -0.81
Ebf3-208ENSMUST00000210774 Ly6c2P0CW03 131 aa9.99□□□□□ -0.81
Ebf3-208ENSMUST00000210774 Igkv8-24A0A140T8P5 121 aa9.98□□□□□ -0.81
Ebf3-208ENSMUST00000210774 Lypd5Q9D7Z7 256 aa9.98□□□□□ -0.81
Ebf3-208ENSMUST00000210774 Igkv4-72A0A0B4J1I4 117 aa9.97□□□□□ -0.81
Ebf3-208ENSMUST00000210774 Fbn1Q61554 2873 aaKnown RBP9.97□□□□□ -0.81
Ebf3-208ENSMUST00000210774 Igkv3-2A0A075B5P0 119 aa9.97□□□□□ -0.81
Ebf3-208ENSMUST00000210774 Gm7075D3Z497 112 aa9.97□□□□□ -0.81
Ebf3-208ENSMUST00000210774 Cdc42se1Q8BHL7 80 aa9.97□□□□□ -0.81
Ebf3-208ENSMUST00000210774 Gpha2Q925Q5 128 aa9.97□□□□□ -0.81
Ebf3-208ENSMUST00000210774 Spink4O35679 86 aa9.96□□□□□ -0.81
Ebf3-208ENSMUST00000210774 Notch1Q01705 2531 aa9.96□□□□□ -0.81
Ebf3-208ENSMUST00000210774 Igkv1-88A0A140T8N1 120 aa9.96□□□□□ -0.82
Ebf3-208ENSMUST00000210774 Gm10770F7D043 238 aa9.96□□□□□ -0.82
Ebf3-208ENSMUST00000210774 Pla2g1bQ9Z0Y2 146 aa9.96□□□□□ -0.82
Ebf3-208ENSMUST00000210774 Igkv1-122A0A140T8M9 119 aa9.95□□□□□ -0.82
Ebf3-208ENSMUST00000210774 Igkv4-54A0A0G2JES9 117 aa9.93□□□□□ -0.82
Ebf3-208ENSMUST00000210774 Cox7bP56393 80 aa9.93□□□□□ -0.82
Ebf3-208ENSMUST00000210774 Tenm1Q9WTS4 2731 aa9.93□□□□□ -0.82
Ebf3-208ENSMUST00000210774 Coa6Q8BGD8 79 aa9.93□□□□□ -0.82
Ebf3-208ENSMUST00000210774 Ighv2-2A0A075B5P8 116 aa9.92□□□□□ -0.82
Ebf3-208ENSMUST00000210774 P01821 116 aa9.92□□□□□ -0.82
Ebf3-208ENSMUST00000210774 Tcl1b3P56842 122 aa9.92□□□□□ -0.82
Ebf3-208ENSMUST00000210774 Chchd7Q8K2Q5 85 aa9.92□□□□□ -0.82
Ebf3-208ENSMUST00000210774 Atox1O08997 68 aaKnown RBP9.9□□□□□ -0.82
Ebf3-208ENSMUST00000210774 Pde6gP09174 87 aa9.9□□□□□ -0.82
Ebf3-208ENSMUST00000210774 A0A286YE02 88 aa9.9□□□□□ -0.82
Ebf3-208ENSMUST00000210774 Fam104aA2A6P4 185 aa9.9□□□□□ -0.83
Ebf3-208ENSMUST00000210774 Nsd1O88491 2588 aaKnown RBP9.9□□□□□ -0.83
Ebf3-208ENSMUST00000210774 Defb40Q70KL2 73 aa9.89□□□□□ -0.83
Ebf3-208ENSMUST00000210774 Col6a5A6H584 2640 aa9.89□□□□□ -0.83
Ebf3-208ENSMUST00000210774 4933415A04RikQ9D443 101 aa9.88□□□□□ -0.83
Ebf3-208ENSMUST00000210774 PolqQ8CGS6 2544 aa9.87□□□□□ -0.83
Ebf3-208ENSMUST00000210774 Coa5Q99M07 74 aa9.87□□□□□ -0.83
Ebf3-208ENSMUST00000210774 Lyrm9Q3UN90 78 aa9.86□□□□□ -0.83
Ebf3-208ENSMUST00000210774 C130032M10RikQ8C888 123 aa9.86□□□□□ -0.83
Ebf3-208ENSMUST00000210774 Srsf12Q8C8K3 266 aa9.86□□□□□ -0.83
Ebf3-208ENSMUST00000210774 Rnase1P00683 149 aa9.85□□□□□ -0.83
Ebf3-208ENSMUST00000210774 PrcdQ00LT2 53 aa9.85□□□□□ -0.83
Ebf3-208ENSMUST00000210774 Sprr1bQ62267 153 aa9.85□□□□□ -0.83
Ebf3-208ENSMUST00000210774 Csmd3Q80T79 3707 aa9.84□□□□□ -0.83
Ebf3-208ENSMUST00000210774 Itpr2Q9Z329 2701 aa9.84□□□□□ -0.83
Ebf3-208ENSMUST00000210774 Gm16181B0V2H2 73 aa9.84□□□□□ -0.83
Ebf3-208ENSMUST00000210774 AY074887Q8R5F9 132 aa9.83□□□□□ -0.84
Ebf3-208ENSMUST00000210774 Krtap11-1E9Q2E9 183 aa9.81□□□□□ -0.84
Ebf3-208ENSMUST00000210774 Gm17509Q9CZ61 145 aa9.81□□□□□ -0.84
Ebf3-208ENSMUST00000210774 Smim29Q8R043 75 aa9.81□□□□□ -0.84
Ebf3-208ENSMUST00000210774 Gm8439G3UWA7 96 aa9.81□□□□□ -0.84
Ebf3-208ENSMUST00000210774 Sprr2jO70561 109 aa9.8□□□□□ -0.84
Ebf3-208ENSMUST00000210774 Igkv8-19A0A0G2JFN8 121 aa9.8□□□□□ -0.84
Ebf3-208ENSMUST00000210774 Gm17577J3QNF7 156 aa9.79□□□□□ -0.84
Ebf3-208ENSMUST00000210774 HrnrQ8VHD8 2496 aa9.77□□□□□ -0.84
Ebf3-208ENSMUST00000210774 Igkv3-9A0A140T8P4 119 aa9.77□□□□□ -0.85
Ebf3-208ENSMUST00000210774 Elof1P60003 83 aa9.77□□□□□ -0.85
Ebf3-208ENSMUST00000210774 PtprqP0C5E4 2300 aa9.77□□□□□ -0.85
Ebf3-208ENSMUST00000210774 Leap2Q91V13 76 aa9.76□□□□□ -0.85
Ebf3-208ENSMUST00000210774 Gm44790A0A0N4SV91 103 aa9.76□□□□□ -0.85
Ebf3-208ENSMUST00000210774 Gm43218A0A0G2JGT0 114 aa9.75□□□□□ -0.85
Ebf3-208ENSMUST00000210774 Mrpl34Q99N91 92 aa9.75□□□□□ -0.85
Ebf3-208ENSMUST00000210774 ApcQ61315 2845 aa9.75□□□□□ -0.85
Ebf3-208ENSMUST00000210774 Gm10837Q3UTT8 145 aa9.75□□□□□ -0.85
Ebf3-208ENSMUST00000210774 Srrm2Q8BTI8 2703 aaKnown RBP9.74□□□□□ -0.85
Ebf3-208ENSMUST00000210774 9530053A07RikE9PVG8 2581 aa9.73□□□□□ -0.85
Ebf3-208ENSMUST00000210774 Sox16Q62247 57 aa9.72□□□□□ -0.85
Ebf3-208ENSMUST00000210774 Cdk2ap2Q9CPY4 127 aa9.72□□□□□ -0.85
Ebf3-208ENSMUST00000210774 Igkv4-92A0A0B4J1I2 117 aa9.71□□□□□ -0.86
Ebf3-208ENSMUST00000210774 A730009L09RikA0A1B0GS82 72 aa9.7□□□□□ -0.86
Ebf3-208ENSMUST00000210774 VwfQ8CIZ8 2813 aa9.7□□□□□ -0.86
Ebf3-208ENSMUST00000210774 Igkv3-3A0A140T8Q0 119 aa9.7□□□□□ -0.86
Ebf3-208ENSMUST00000210774 1700042G07RikB1AUF7 90 aa9.69□□□□□ -0.86
Ebf3-208ENSMUST00000210774 Cox6a2P43023 97 aa9.69□□□□□ -0.86
Ebf3-208ENSMUST00000210774 TgO08710 2766 aa9.68□□□□□ -0.86
Ebf3-208ENSMUST00000210774 Erdr1J3QMM0 206 aa9.67□□□□□ -0.86
Ebf3-208ENSMUST00000210774 Phxr4P15974 95 aa9.67□□□□□ -0.86
Ebf3-208ENSMUST00000210774 OxtP35454 125 aa9.67□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 60.3 ms