RNA–Protein interactions for RNA: ENSMUST00000205694.1

Rnf40-202, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf40, Length 5,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-202ENSMUST00000205694 Spata3Q9D9T6 193 aa9.07□□□□□ -0.96
Rnf40-202ENSMUST00000205694 6430550D23RikE9Q1X6 194 aa9.07□□□□□ -0.96
Rnf40-202ENSMUST00000205694 Spint4Q9D263 159 aa9.07□□□□□ -0.96
Rnf40-202ENSMUST00000205694 Col12a1Q60847 3120 aa9.06□□□□□ -0.96
Rnf40-202ENSMUST00000205694 Defb50Q6TU36 73 aa9.06□□□□□ -0.96
Rnf40-202ENSMUST00000205694 Snhg11Q4G0K9 87 aa9.05□□□□□ -0.96
Rnf40-202ENSMUST00000205694 Krtap26-1Q9D7N2 215 aa9.05□□□□□ -0.96
Rnf40-202ENSMUST00000205694 Igkv8-27A0A0G2JF28 120 aa9.05□□□□□ -0.96
Rnf40-202ENSMUST00000205694 Gm44790A0A0N4SV91 103 aa9.04□□□□□ -0.96
Rnf40-202ENSMUST00000205694 Gm10837Q3UTT8 145 aa9.04□□□□□ -0.96
Rnf40-202ENSMUST00000205694 FasnP19096 2504 aaKnown RBP9.03□□□□□ -0.96
Rnf40-202ENSMUST00000205694 Gpr15lA0A0B4J1N3 78 aa9.02□□□□□ -0.97
Rnf40-202ENSMUST00000205694 Phf5aP83870 110 aaKnown RBP9.02□□□□□ -0.97
Rnf40-202ENSMUST00000205694 Prol1E9PYQ4 312 aa9.02□□□□□ -0.97
Rnf40-202ENSMUST00000205694 Limd2Q8BGB5 128 aa9.01□□□□□ -0.97
Rnf40-202ENSMUST00000205694 Gm12216A0A1W2P827 62 aa9□□□□□ -0.97
Rnf40-202ENSMUST00000205694 Gm10999F6Q4M4 69 aa9□□□□□ -0.97
Rnf40-202ENSMUST00000205694 A930002H24RikQ8C8Y3 163 aa9□□□□□ -0.97
Rnf40-202ENSMUST00000205694 Krtap16-1A2A5X5 502 aa8.99□□□□□ -0.97
Rnf40-202ENSMUST00000205694 Gm10772F7AIG4 85 aa8.97□□□□□ -0.97
Rnf40-202ENSMUST00000205694 4930507D05RikQ8C9C9 103 aa8.97□□□□□ -0.97
Rnf40-202ENSMUST00000205694 Gm7173A0A0G2JEB6 3132 aa8.97□□□□□ -0.97
Rnf40-202ENSMUST00000205694 FlnbQ80X90 2602 aaKnown RBP8.97□□□□□ -0.97
Rnf40-202ENSMUST00000205694 Gm10770F7D043 238 aa8.96□□□□□ -0.97
Rnf40-202ENSMUST00000205694 Cep192E9Q4Y4 2514 aaKnown RBP8.96□□□□□ -0.98
Rnf40-202ENSMUST00000205694 Gm3250E9Q1M3 230 aa8.96□□□□□ -0.98
Rnf40-202ENSMUST00000205694 Spaca4Q80ZQ0 127 aa8.96□□□□□ -0.98
Rnf40-202ENSMUST00000205694 Gm27235Q3UW50 83 aa8.95□□□□□ -0.98
Rnf40-202ENSMUST00000205694 AI854703Q8BIN3 203 aa8.95□□□□□ -0.98
Rnf40-202ENSMUST00000205694 Rps28P62858 69 aaKnown RBP8.94□□□□□ -0.98
Rnf40-202ENSMUST00000205694 Cdh23Q99PF4 3354 aa8.94□□□□□ -0.98
Rnf40-202ENSMUST00000205694 A530084C06RikQ3UTW2 186 aa8.93□□□□□ -0.98
Rnf40-202ENSMUST00000205694 Nbeal1E9PYP2 2688 aa8.93□□□□□ -0.98
Rnf40-202ENSMUST00000205694 Q8BGJ3 129 aa8.92□□□□□ -0.98
Rnf40-202ENSMUST00000205694 Q8BT88 171 aa8.91□□□□□ -0.98
Rnf40-202ENSMUST00000205694 Mki67E9PVX6 3177 aaKnown RBP8.91□□□□□ -0.98
Rnf40-202ENSMUST00000205694 Gm10308Q9CVR5 141 aa8.9□□□□□ -0.98
Rnf40-202ENSMUST00000205694 Prune2Q52KR3 3084 aa8.89□□□□□ -0.99
Rnf40-202ENSMUST00000205694 Szt2A2A9C3 3431 aa8.88□□□□□ -0.99
Rnf40-202ENSMUST00000205694 Gm17689B3GLJ4 109 aa8.88□□□□□ -0.99
Rnf40-202ENSMUST00000205694 Ankrd17Q99NH0 2603 aaKnown RBP8.88□□□□□ -0.99
Rnf40-202ENSMUST00000205694 Rpl37aP61514 92 aa8.87□□□□□ -0.99
Rnf40-202ENSMUST00000205694 Gm5617Q91VN2 117 aa8.87□□□□□ -0.99
Rnf40-202ENSMUST00000205694 RetnlbQ99P86 105 aa8.87□□□□□ -0.99
Rnf40-202ENSMUST00000205694 Hectd1Q69ZR2 2618 aaKnown RBP8.86□□□□□ -0.99
Rnf40-202ENSMUST00000205694 Sprr4Q8CGN8 76 aa8.86□□□□□ -0.99
Rnf40-202ENSMUST00000205694 Lelp1Q9DAE3 120 aa8.85□□□□□ -0.99
Rnf40-202ENSMUST00000205694 Gm20661K7N787 53 aa8.84□□□□□ -0.99
Rnf40-202ENSMUST00000205694 AplnQ9R0R4 77 aa8.84□□□□□ -0.99
Rnf40-202ENSMUST00000205694 Fam168bQ80XQ8 194 aa8.82□□□□□ -1
Rnf40-202ENSMUST00000205694 1810062G17RikG3X8Y2 129 aa8.82□□□□□ -1
Rnf40-202ENSMUST00000205694 Krtap11-1E9Q2E9 183 aa8.81□□□□□ -1
Rnf40-202ENSMUST00000205694 AW011738F6S7Q2 159 aa8.81□□□□□ -1
Rnf40-202ENSMUST00000205694 AY074887Q8R5F9 132 aa8.81□□□□□ -1
Rnf40-202ENSMUST00000205694 Fn1P11276 2477 aaKnown RBP8.8□□□□□ -1
Rnf40-202ENSMUST00000205694 Usp24B1AY13 2617 aaKnown RBP8.8□□□□□ -1
Rnf40-202ENSMUST00000205694 Prr13Q9CQJ5 137 aa8.8□□□□□ -1
Rnf40-202ENSMUST00000205694 Itpr1P11881 2749 aa8.78□□□□□ -1
Rnf40-202ENSMUST00000205694 Cdc42se1Q8BHL7 80 aa8.77□□□□□ -1
Rnf40-202ENSMUST00000205694 Defb1P56386 69 aa8.77□□□□□ -1.01
Rnf40-202ENSMUST00000205694 7530416G11RikJ3QJX6 159 aa8.77□□□□□ -1.01
Rnf40-202ENSMUST00000205694 Coa5Q99M07 74 aa8.76□□□□□ -1.01
Rnf40-202ENSMUST00000205694 Sprr1bQ62267 153 aa8.76□□□□□ -1.01
Rnf40-202ENSMUST00000205694 AtrQ9JKK8 2635 aa8.75□□□□□ -1.01
Rnf40-202ENSMUST00000205694 Mp68P56379 58 aa8.75□□□□□ -1.01
Rnf40-202ENSMUST00000205694 Lypd5Q9D7Z7 256 aa8.74□□□□□ -1.01
Rnf40-202ENSMUST00000205694 Eif4ebp3Q80VV3 101 aa8.73□□□□□ -1.01
Rnf40-202ENSMUST00000205694 Gm7276Q3TYW4 209 aa8.7□□□□□ -1.02
Rnf40-202ENSMUST00000205694 Cypt15B1AXS0 87 aa8.69□□□□□ -1.02
Rnf40-202ENSMUST00000205694 Phxr4P15974 95 aa8.68□□□□□ -1.02
Rnf40-202ENSMUST00000205694 Gm3233E9Q2H5 230 aa8.67□□□□□ -1.02
Rnf40-202ENSMUST00000205694 Gm11213A0A1B0GR83 88 aa8.66□□□□□ -1.02
Rnf40-202ENSMUST00000205694 Jbts17Q8CE72 3214 aa8.66□□□□□ -1.02
Rnf40-202ENSMUST00000205694 KalrnA2CG49 2964 aa8.65□□□□□ -1.02
Rnf40-202ENSMUST00000205694 Defb9Q8R2I6 67 aa8.65□□□□□ -1.02
Rnf40-202ENSMUST00000205694 Uqcr11Q9CPX8 56 aa8.64□□□□□ -1.03
Rnf40-202ENSMUST00000205694 Gm9195A0A140LHT4 2805 aa8.64□□□□□ -1.03
Rnf40-202ENSMUST00000205694 C530025M09RikF6RGA8 229 aa8.63□□□□□ -1.03
Rnf40-202ENSMUST00000205694 MgaA2AWL7 3003 aaKnown RBP8.63□□□□□ -1.03
Rnf40-202ENSMUST00000205694 A330070K13RikQ8CA53 115 aa8.63□□□□□ -1.03
Rnf40-202ENSMUST00000205694 AspmQ8CJ27 3122 aa8.63□□□□□ -1.03
Rnf40-202ENSMUST00000205694 Dmxl1Q6PNC0 3013 aa8.62□□□□□ -1.03
Rnf40-202ENSMUST00000205694 OxtP35454 125 aa8.61□□□□□ -1.03
Rnf40-202ENSMUST00000205694 CnbpP53996 178 aaKnown RBP8.6□□□□□ -1.03
Rnf40-202ENSMUST00000205694 Rnase13Q5GAM7 153 aa8.6□□□□□ -1.03
Rnf40-202ENSMUST00000205694 Unc80Q8BLN6 3261 aa8.59□□□□□ -1.03
Rnf40-202ENSMUST00000205694 Nsd1O88491 2588 aaKnown RBP8.57□□□□□ -1.04
Rnf40-202ENSMUST00000205694 Phxr5P08399 672 aa8.57□□□□□ -1.04
Rnf40-202ENSMUST00000205694 Gm26620Q9CY65 116 aa8.57□□□□□ -1.04
Rnf40-202ENSMUST00000205694 Plac8Q9JI48 112 aa8.57□□□□□ -1.04
Rnf40-202ENSMUST00000205694 Vps13aQ5H8C4 3166 aa8.56□□□□□ -1.04
Rnf40-202ENSMUST00000205694 Fbn2Q61555 2907 aa8.56□□□□□ -1.04
Rnf40-202ENSMUST00000205694 FlnaQ8BTM8 2647 aaKnown RBP8.55□□□□□ -1.04
Rnf40-202ENSMUST00000205694 Anapc11Q9CPX9 84 aa8.55□□□□□ -1.04
Rnf40-202ENSMUST00000205694 Notch1Q01705 2531 aa8.55□□□□□ -1.04
Rnf40-202ENSMUST00000205694 Fam104aA2A6P4 185 aa8.55□□□□□ -1.04
Rnf40-202ENSMUST00000205694 Zcchc13Q9D548 170 aa8.54□□□□□ -1.04
Rnf40-202ENSMUST00000205694 Gm10643Q3URG9 111 aa8.51□□□□□ -1.05
Rnf40-202ENSMUST00000205694 Gm20538F6Z9R1 75 aa8.51□□□□□ -1.05
Rnf40-202ENSMUST00000205694 Chtf8P0CG14 533 aa8.5□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 10.3 ms