RNA–Protein interactions for RNA: ENSMUST00000088356.9

Usf3-201, Transcript of Gene model 608, (NCBI), mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Usf3, Length 757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3-201ENSMUST00000088356 Gm10845Q3UNY9 185 aa9.56□□□□□ -0.88
Usf3-201ENSMUST00000088356 Q9DAA7 145 aa9.56□□□□□ -0.88
Usf3-201ENSMUST00000088356 Igkv8-26A0A075B5N5 123 aa9.55□□□□□ -0.88
Usf3-201ENSMUST00000088356 Bloc1s1O55102 125 aa9.55□□□□□ -0.88
Usf3-201ENSMUST00000088356 Fabp4P04117 132 aa9.55□□□□□ -0.88
Usf3-201ENSMUST00000088356 Mrpl18Q9CQL5 180 aa9.55□□□□□ -0.88
Usf3-201ENSMUST00000088356 Cd164Q9R0L9 197 aa9.55□□□□□ -0.88
Usf3-201ENSMUST00000088356 Gm11555B1AQ89 175 aa9.54□□□□□ -0.88
Usf3-201ENSMUST00000088356 1700042G07RikB1AUF7 90 aa9.54□□□□□ -0.88
Usf3-201ENSMUST00000088356 BC107364E9Q5A2 140 aa9.54□□□□□ -0.88
Usf3-201ENSMUST00000088356 Olfr983Q8VG90 315 aa9.54□□□□□ -0.88
Usf3-201ENSMUST00000088356 1500009C09RikD3YYW9 81 aa9.53□□□□□ -0.88
Usf3-201ENSMUST00000088356 4930432M17RikQ3V0W9 174 aa9.53□□□□□ -0.88
Usf3-201ENSMUST00000088356 Slamf6Q9ET39 351 aa9.53□□□□□ -0.88
Usf3-201ENSMUST00000088356 Krtap16-3Q8C1I6 86 aa9.52□□□□□ -0.89
Usf3-201ENSMUST00000088356 Krtap19-1Q925H2 87 aa9.52□□□□□ -0.89
Usf3-201ENSMUST00000088356 Igkv1-117A0A140T8M0 119 aa9.51□□□□□ -0.89
Usf3-201ENSMUST00000088356 Bsph1Q3UW26 133 aa9.51□□□□□ -0.89
Usf3-201ENSMUST00000088356 Tma7Q8K003 64 aaKnown RBP9.51□□□□□ -0.89
Usf3-201ENSMUST00000088356 Tcrg-V4A0A0B4J1J8 138 aa9.5□□□□□ -0.89
Usf3-201ENSMUST00000088356 Smim7Q5RKS2 75 aa9.5□□□□□ -0.89
Usf3-201ENSMUST00000088356 RnasekQ8K3C0 98 aa9.5□□□□□ -0.89
Usf3-201ENSMUST00000088356 2310034C09RikQ9D746 214 aa9.5□□□□□ -0.89
Usf3-201ENSMUST00000088356 Trav13n-2A0A0G2JF93 110 aa9.48□□□□□ -0.89
Usf3-201ENSMUST00000088356 Rmi2Q3UPE3 149 aa9.47□□□□□ -0.89
Usf3-201ENSMUST00000088356 A930004D18RikQ8C8W7 157 aa9.46□□□□□ -0.9
Usf3-201ENSMUST00000088356 Iglc1A0A0G2JE99 106 aa9.45□□□□□ -0.9
Usf3-201ENSMUST00000088356 1700011M02RikB1AX35 88 aa9.45□□□□□ -0.9
Usf3-201ENSMUST00000088356 Gm2310J3QNJ2 377 aa9.45□□□□□ -0.9
Usf3-201ENSMUST00000088356 Gm26727M0QWT1 121 aa9.45□□□□□ -0.9
Usf3-201ENSMUST00000088356 Cox7bP56393 80 aa9.45□□□□□ -0.9
Usf3-201ENSMUST00000088356 Krtap1-4Q3V2D6 188 aa9.45□□□□□ -0.9
Usf3-201ENSMUST00000088356 Gatd1Q8BFQ8 220 aa9.45□□□□□ -0.9
Usf3-201ENSMUST00000088356 Spata45Q9CVW4 97 aa9.45□□□□□ -0.9
Usf3-201ENSMUST00000088356 S100a8P27005 89 aa9.44□□□□□ -0.9
Usf3-201ENSMUST00000088356 PlnP61014 52 aa9.44□□□□□ -0.9
Usf3-201ENSMUST00000088356 Cib3Q0P523 160 aa9.44□□□□□ -0.9
Usf3-201ENSMUST00000088356 Igkv8-18A0A0B4J1J3 123 aa9.42□□□□□ -0.9
Usf3-201ENSMUST00000088356 Lce1jD3YUU5 139 aa9.42□□□□□ -0.9
Usf3-201ENSMUST00000088356 P01837 106 aa9.42□□□□□ -0.9
Usf3-201ENSMUST00000088356 Wdr38Q9D994 303 aa9.42□□□□□ -0.9
Usf3-201ENSMUST00000088356 Brd3osA0A1B0GRB6 84 aa9.41□□□□□ -0.9
Usf3-201ENSMUST00000088356 Muc5bE9Q5I3 4800 aa9.41□□□□□ -0.9
Usf3-201ENSMUST00000088356 2310034G01RikA0A286YDL3 209 aa9.4□□□□□ -0.9
Usf3-201ENSMUST00000088356 Ypel4Q65Z93 127 aa9.4□□□□□ -0.9
Usf3-201ENSMUST00000088356 Ccl25O35903 144 aa9.39□□□□□ -0.91
Usf3-201ENSMUST00000088356 Prelid3aQ8VE85 172 aa9.39□□□□□ -0.91
Usf3-201ENSMUST00000088356 BC048502Q80Y74 154 aa9.37□□□□□ -0.91
Usf3-201ENSMUST00000088356 Gm11939A2A592 99 aa9.36□□□□□ -0.91
Usf3-201ENSMUST00000088356 Gm29289A0A087WPY7 166 aa9.35□□□□□ -0.91
Usf3-201ENSMUST00000088356 Q3UUX7 111 aa9.35□□□□□ -0.91
Usf3-201ENSMUST00000088356 Ssbp1Q9CYR0 152 aaKnown RBP9.34□□□□□ -0.91
Usf3-201ENSMUST00000088356 Urm1Q9D2P4 101 aa9.34□□□□□ -0.91
Usf3-201ENSMUST00000088356 Hsbp1l1B2RXB2 72 aa9.32□□□□□ -0.92
Usf3-201ENSMUST00000088356 Krtap4-6Q3V4B7 195 aa9.32□□□□□ -0.92
Usf3-201ENSMUST00000088356 Scgb1b10A0A087WPW0 93 aa9.31□□□□□ -0.92
Usf3-201ENSMUST00000088356 Gm9805F6YK59 57 aa9.31□□□□□ -0.92
Usf3-201ENSMUST00000088356 Gm11020F6ZGD5 61 aa9.31□□□□□ -0.92
Usf3-201ENSMUST00000088356 Gm21834J3QN05 151 aa9.31□□□□□ -0.92
Usf3-201ENSMUST00000088356 NpyP57774 97 aa9.31□□□□□ -0.92
Usf3-201ENSMUST00000088356 Rpl32-psP17932 135 aa9.3□□□□□ -0.92
Usf3-201ENSMUST00000088356 Sostdc1Q9CQN4 206 aa9.3□□□□□ -0.92
Usf3-201ENSMUST00000088356 E130218I03RikA0A0U1RNU5 63 aa9.29□□□□□ -0.92
Usf3-201ENSMUST00000088356 Igkv1-122A0A140T8M9 119 aa9.29□□□□□ -0.92
Usf3-201ENSMUST00000088356 Mrps10Q80ZK0 160 aaKnown RBP9.29□□□□□ -0.92
Usf3-201ENSMUST00000088356 Chac1Q8R3J5 223 aa9.29□□□□□ -0.92
Usf3-201ENSMUST00000088356 Fam213bQ9DB60 201 aa9.29□□□□□ -0.92
Usf3-201ENSMUST00000088356 Gm9047B9EJX3 177 aa9.28□□□□□ -0.92
Usf3-201ENSMUST00000088356 Gm21886J3QJU9 214 aa9.28□□□□□ -0.92
Usf3-201ENSMUST00000088356 Gm5153P01627 120 aa9.28□□□□□ -0.92
Usf3-201ENSMUST00000088356 A830005F24RikQ8BRT5 167 aa9.28□□□□□ -0.92
Usf3-201ENSMUST00000088356 Defb29Q8BGW9 78 aa9.27□□□□□ -0.93
Usf3-201ENSMUST00000088356 Stard4Q99JV5 224 aa9.27□□□□□ -0.93
Usf3-201ENSMUST00000088356 Mdn1A2ANY6 5589 aaKnown RBP9.26□□□□□ -0.93
Usf3-201ENSMUST00000088356 Igkv3-4A0A140T8Q4 119 aa9.25□□□□□ -0.93
Usf3-201ENSMUST00000088356 Esp34G3UXG0 151 aa9.25□□□□□ -0.93
Usf3-201ENSMUST00000088356 Gm42674D3YUT9 64 aa9.24□□□□□ -0.93
Usf3-201ENSMUST00000088356 SnrpeP62305 92 aaKnown RBP9.24□□□□□ -0.93
Usf3-201ENSMUST00000088356 Lamtor3O88653 124 aa9.23□□□□□ -0.93
Usf3-201ENSMUST00000088356 Gm7276Q3TYW4 209 aa9.23□□□□□ -0.93
Usf3-201ENSMUST00000088356 Gm42420A0A0J9YUQ2 99 aa9.22□□□□□ -0.93
Usf3-201ENSMUST00000088356 9130204L05RikG3UWB8 92 aa9.22□□□□□ -0.93
Usf3-201ENSMUST00000088356 Hist1h2bmP10854 126 aa9.22□□□□□ -0.93
Usf3-201ENSMUST00000088356 Hist1h2bhQ64478 126 aa9.22□□□□□ -0.93
Usf3-201ENSMUST00000088356 Hist2h2bbQ64525 126 aa9.22□□□□□ -0.93
Usf3-201ENSMUST00000088356 Hist1h2bcQ6ZWY9 126 aaKnown RBP9.22□□□□□ -0.93
Usf3-201ENSMUST00000088356 A930002H24RikQ8C8Y3 163 aa9.22□□□□□ -0.93
Usf3-201ENSMUST00000088356 Ndufc2Q9CQ54 120 aa9.22□□□□□ -0.93
Usf3-201ENSMUST00000088356 Tcl1b3P56842 122 aa9.21□□□□□ -0.94
Usf3-201ENSMUST00000088356 Rpl37Q9D823 97 aa9.21□□□□□ -0.94
Usf3-201ENSMUST00000088356 Fam240aJ3QNP9 97 aa9.2□□□□□ -0.94
Usf3-201ENSMUST00000088356 Defb37Q7TMD2 62 aa9.2□□□□□ -0.94
Usf3-201ENSMUST00000088356 Mustn1Q99JI1 82 aa9.2□□□□□ -0.94
Usf3-201ENSMUST00000088356 Csdc2Q91YQ3 154 aa9.19□□□□□ -0.94
Usf3-201ENSMUST00000088356 Tomm6Q9CQN3 74 aa9.19□□□□□ -0.94
Usf3-201ENSMUST00000088356 Gm10770F7D043 238 aa9.17□□□□□ -0.94
Usf3-201ENSMUST00000088356 Igkv8-28A0A0G2JE47 121 aa9.16□□□□□ -0.94
Usf3-201ENSMUST00000088356 Vpreb3D3Z6J4 130 aa9.16□□□□□ -0.94
Usf3-201ENSMUST00000088356 Grcc10O35127 126 aa9.16□□□□□ -0.94
Usf3-201ENSMUST00000088356 5930422O12RikQ8C4Y4 123 aa9.16□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 93.1 ms