RNA–Protein interactions for RNA: ENSMUST00000063116.9

Msx1-201, Transcript of Homeobox protein MSX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msx1, Length 1,935 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1-201ENSMUST00000063116 Rpl39lQ9CQD0 51 aa12.74□□□□□ -0.37
Msx1-201ENSMUST00000063116 Gm9805F6YK59 57 aa12.73□□□□□ -0.37
Msx1-201ENSMUST00000063116 Defb40Q70KL2 73 aa12.73□□□□□ -0.37
Msx1-201ENSMUST00000063116 Mrpl52Q9D0Y8 121 aa12.72□□□□□ -0.37
Msx1-201ENSMUST00000063116 TgO08710 2766 aa12.71□□□□□ -0.38
Msx1-201ENSMUST00000063116 Klk12B2RVZ0 247 aa12.7□□□□□ -0.38
Msx1-201ENSMUST00000063116 Gm11627A6PWP4 55 aa12.68□□□□□ -0.38
Msx1-201ENSMUST00000063116 Cdk2ap2Q9CPY4 127 aa12.68□□□□□ -0.38
Msx1-201ENSMUST00000063116 Pcp4P63054 62 aa12.68□□□□□ -0.38
Msx1-201ENSMUST00000063116 Gm10735Q3US96 136 aa12.68□□□□□ -0.38
Msx1-201ENSMUST00000063116 Gm10770F7D043 238 aa12.67□□□□□ -0.38
Msx1-201ENSMUST00000063116 Lyrm7Q9DA03 104 aa12.67□□□□□ -0.38
Msx1-201ENSMUST00000063116 Ighv10-1A0A0B4J1J6 119 aa12.66□□□□□ -0.38
Msx1-201ENSMUST00000063116 Spata45Q9CVW4 97 aa12.66□□□□□ -0.38
Msx1-201ENSMUST00000063116 2310050C09RikG5E8Z3 280 aa12.66□□□□□ -0.38
Msx1-201ENSMUST00000063116 Igkv1-88A0A140T8N1 120 aa12.65□□□□□ -0.38
Msx1-201ENSMUST00000063116 BC048502Q80Y74 154 aa12.65□□□□□ -0.38
Msx1-201ENSMUST00000063116 Gm10320E9PW43 113 aa12.64□□□□□ -0.39
Msx1-201ENSMUST00000063116 Pou2af1Q64693 256 aa12.64□□□□□ -0.39
Msx1-201ENSMUST00000063116 Xcl1P47993 114 aa12.64□□□□□ -0.39
Msx1-201ENSMUST00000063116 Dnah7aE9Q0T8 4024 aa12.63□□□□□ -0.39
Msx1-201ENSMUST00000063116 Igkv4-58A0A0G2JGI6 119 aa12.62□□□□□ -0.39
Msx1-201ENSMUST00000063116 Gm10837Q3UTT8 145 aa12.62□□□□□ -0.39
Msx1-201ENSMUST00000063116 Nupr2Q497P3 102 aa12.62□□□□□ -0.39
Msx1-201ENSMUST00000063116 2310034G01RikA0A286YDL3 209 aa12.62□□□□□ -0.39
Msx1-201ENSMUST00000063116 Fam168bQ80XQ8 194 aa12.62□□□□□ -0.39
Msx1-201ENSMUST00000063116 Smim29Q8R043 75 aa12.62□□□□□ -0.39
Msx1-201ENSMUST00000063116 Znf414Q9DCK4 299 aa12.62□□□□□ -0.39
Msx1-201ENSMUST00000063116 Ly6g6cQ9Z1Q4 126 aa12.6□□□□□ -0.39
Msx1-201ENSMUST00000063116 E130218I03RikA0A0U1RNU5 63 aa12.59□□□□□ -0.39
Msx1-201ENSMUST00000063116 Wfdc6bF6ULY1 148 aa12.59□□□□□ -0.39
Msx1-201ENSMUST00000063116 Igkv2-109A0A075B5K6 120 aa12.58□□□□□ -0.4
Msx1-201ENSMUST00000063116 Igkv3-2A0A075B5P0 119 aa12.58□□□□□ -0.4
Msx1-201ENSMUST00000063116 Ifitm6A0A1B0GS75 124 aa12.58□□□□□ -0.4
Msx1-201ENSMUST00000063116 Gm7102J3QQ10 178 aa12.58□□□□□ -0.4
Msx1-201ENSMUST00000063116 Plac8Q9JI48 112 aa12.57□□□□□ -0.4
Msx1-201ENSMUST00000063116 Trav14d-3-dv8A0A075B619 120 aa12.56□□□□□ -0.4
Msx1-201ENSMUST00000063116 Msrb1Q9JLC3 116 aa12.55□□□□□ -0.4
Msx1-201ENSMUST00000063116 Cd164Q9R0L9 197 aa12.55□□□□□ -0.4
Msx1-201ENSMUST00000063116 Dnah7cA0A087WR13 4024 aa12.55□□□□□ -0.4
Msx1-201ENSMUST00000063116 P84750 121 aa12.54□□□□□ -0.4
Msx1-201ENSMUST00000063116 Q9DAA7 145 aa12.54□□□□□ -0.4
Msx1-201ENSMUST00000063116 Elof1P60003 83 aa12.53□□□□□ -0.4
Msx1-201ENSMUST00000063116 Prol1E9PYQ4 312 aa12.52□□□□□ -0.4
Msx1-201ENSMUST00000063116 Ighv10-3A0A075B5T6 119 aa12.51□□□□□ -0.41
Msx1-201ENSMUST00000063116 Gm7276Q3TYW4 209 aa12.51□□□□□ -0.41
Msx1-201ENSMUST00000063116 SycnQ8VCK7 134 aa12.51□□□□□ -0.41
Msx1-201ENSMUST00000063116 Defa4P28311 92 aa12.5□□□□□ -0.41
Msx1-201ENSMUST00000063116 Obox2E9PXV9 151 aa12.5□□□□□ -0.41
Msx1-201ENSMUST00000063116 Tmem213Q08EA8 116 aa12.5□□□□□ -0.41
Msx1-201ENSMUST00000063116 Defa23Q5G866 93 aa12.5□□□□□ -0.41
Msx1-201ENSMUST00000063116 Fam19a5Q91WE9 132 aa12.5□□□□□ -0.41
Msx1-201ENSMUST00000063116 Igkv8-26A0A075B5N5 123 aa12.49□□□□□ -0.41
Msx1-201ENSMUST00000063116 Fam19a1Q7TPG8 133 aa12.49□□□□□ -0.41
Msx1-201ENSMUST00000063116 Dmac1Q9CQ00 111 aa12.48□□□□□ -0.41
Msx1-201ENSMUST00000063116 Ntn5Q3UQ22 452 aa12.47□□□□□ -0.41
Msx1-201ENSMUST00000063116 Defa27F2Z403 93 aa12.46□□□□□ -0.42
Msx1-201ENSMUST00000063116 Zcchc13Q9D548 170 aa12.46□□□□□ -0.42
Msx1-201ENSMUST00000063116 U90926O08546 118 aa12.45□□□□□ -0.42
Msx1-201ENSMUST00000063116 Lamtor3O88653 124 aa12.45□□□□□ -0.42
Msx1-201ENSMUST00000063116 9530003J23RikQ8BM26 151 aa12.45□□□□□ -0.42
Msx1-201ENSMUST00000063116 PscaP57096 123 aa12.44□□□□□ -0.42
Msx1-201ENSMUST00000063116 Anapc13Q8R034 74 aa12.43□□□□□ -0.42
Msx1-201ENSMUST00000063116 Krtap10-4Q08EG8 221 aa12.42□□□□□ -0.42
Msx1-201ENSMUST00000063116 1700012A03RikQ9DAF1 130 aa12.42□□□□□ -0.42
Msx1-201ENSMUST00000063116 Igkv8-27A0A0G2JF28 120 aa12.41□□□□□ -0.42
Msx1-201ENSMUST00000063116 Igkv8-30A0A140T8M3 121 aa12.41□□□□□ -0.42
Msx1-201ENSMUST00000063116 Vps13dB1ART2 4390 aa12.4□□□□□ -0.43
Msx1-201ENSMUST00000063116 Atp5eP56382 52 aa12.39□□□□□ -0.43
Msx1-201ENSMUST00000063116 Defb37Q7TMD2 62 aa12.39□□□□□ -0.43
Msx1-201ENSMUST00000063116 Igkv1-122A0A140T8M9 119 aa12.37□□□□□ -0.43
Msx1-201ENSMUST00000063116 Inafm2A0A1L1STD6 152 aa12.37□□□□□ -0.43
Msx1-201ENSMUST00000063116 OxtP35454 125 aa12.37□□□□□ -0.43
Msx1-201ENSMUST00000063116 Gm11011D3Z3L9 86 aa12.36□□□□□ -0.43
Msx1-201ENSMUST00000063116 Gm10065F6TJM2 114 aa12.36□□□□□ -0.43
Msx1-201ENSMUST00000063116 Ormdl1Q921I0 153 aa12.35□□□□□ -0.43
Msx1-201ENSMUST00000063116 Ighv2-2A0A075B5P8 116 aa12.34□□□□□ -0.43
Msx1-201ENSMUST00000063116 Ighv2-5A0A0A6YY69 116 aa12.34□□□□□ -0.43
Msx1-201ENSMUST00000063116 P01821 116 aa12.34□□□□□ -0.43
Msx1-201ENSMUST00000063116 Dnah2P0C6F1 4456 aa12.34□□□□□ -0.43
Msx1-201ENSMUST00000063116 Fam104aA2A6P4 185 aa12.33□□□□□ -0.44
Msx1-201ENSMUST00000063116 Dnah5Q8VHE6 4621 aa12.33□□□□□ -0.44
Msx1-201ENSMUST00000063116 Phf5aP83870 110 aaKnown RBP12.33□□□□□ -0.44
Msx1-201ENSMUST00000063116 Tmem243B2RVB9 118 aa12.32□□□□□ -0.44
Msx1-201ENSMUST00000063116 Krtap29-1A2A5X4 342 aa12.31□□□□□ -0.44
Msx1-201ENSMUST00000063116 Rbm3O89086 153 aaKnown RBP12.31□□□□□ -0.44
Msx1-201ENSMUST00000063116 Pde6gP09174 87 aa12.31□□□□□ -0.44
Msx1-201ENSMUST00000063116 Defb9Q8R2I6 67 aa12.31□□□□□ -0.44
Msx1-201ENSMUST00000063116 A930002H24RikQ8C8Y3 163 aa12.29□□□□□ -0.44
Msx1-201ENSMUST00000063116 PkigO70139 76 aa12.28□□□□□ -0.44
Msx1-201ENSMUST00000063116 Gm10308Q9CVR5 141 aa12.27□□□□□ -0.45
Msx1-201ENSMUST00000063116 A0A286YE02 88 aa12.26□□□□□ -0.45
Msx1-201ENSMUST00000063116 Defa7P50705 93 aa12.26□□□□□ -0.45
Msx1-201ENSMUST00000063116 A730071L15RikQ8C4X0 137 aa12.26□□□□□ -0.45
Msx1-201ENSMUST00000063116 Sfta2E9PXB6 77 aa12.25□□□□□ -0.45
Msx1-201ENSMUST00000063116 Vpreb2P13373 142 aa12.25□□□□□ -0.45
Msx1-201ENSMUST00000063116 A830005F24RikQ8BRT5 167 aa12.25□□□□□ -0.45
Msx1-201ENSMUST00000063116 Igkv8-21A0A140T8P7 120 aa12.24□□□□□ -0.45
Msx1-201ENSMUST00000063116 Ubl5Q9EPV8 73 aa12.23□□□□□ -0.45
Msx1-201ENSMUST00000063116 Tmem254aP0DN89 123 aa12.23□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 47 ms