RNA–Protein interactions for RNA: ENSMUST00000009885.13

Ubp1-201, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ubp1, Length 3,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-201ENSMUST00000009885 Notch2O35516 2470 aa12.68□□□□□ -0.38
Ubp1-201ENSMUST00000009885 2310034G01RikA0A286YDL3 209 aa12.67□□□□□ -0.38
Ubp1-201ENSMUST00000009885 Notch1Q01705 2531 aa12.67□□□□□ -0.38
Ubp1-201ENSMUST00000009885 Cd164Q9R0L9 197 aa12.67□□□□□ -0.38
Ubp1-201ENSMUST00000009885 Ighv2-5A0A0A6YY69 116 aa12.67□□□□□ -0.38
Ubp1-201ENSMUST00000009885 Defb40Q70KL2 73 aa12.67□□□□□ -0.38
Ubp1-201ENSMUST00000009885 Cox7b2Q9D2H1 82 aa12.66□□□□□ -0.38
Ubp1-201ENSMUST00000009885 HrnrQ8VHD8 2496 aa12.66□□□□□ -0.38
Ubp1-201ENSMUST00000009885 BaalcQ8VHV1 145 aa12.64□□□□□ -0.39
Ubp1-201ENSMUST00000009885 UqcrqQ9CQ69 82 aa12.63□□□□□ -0.39
Ubp1-201ENSMUST00000009885 Gm3250E9Q1M3 230 aa12.62□□□□□ -0.39
Ubp1-201ENSMUST00000009885 Gm5617Q91VN2 117 aa12.62□□□□□ -0.39
Ubp1-201ENSMUST00000009885 6430550D23RikE9Q1X6 194 aa12.62□□□□□ -0.39
Ubp1-201ENSMUST00000009885 D730001G18RikA0A087WQU7 115 aa12.62□□□□□ -0.39
Ubp1-201ENSMUST00000009885 Sprr1bQ62267 153 aa12.62□□□□□ -0.39
Ubp1-201ENSMUST00000009885 Krtap11-1E9Q2E9 183 aa12.61□□□□□ -0.39
Ubp1-201ENSMUST00000009885 Gm10770F7D043 238 aa12.6□□□□□ -0.39
Ubp1-201ENSMUST00000009885 Igkv8-28A0A0G2JE47 121 aa12.6□□□□□ -0.39
Ubp1-201ENSMUST00000009885 Reg3bP35230 175 aa12.6□□□□□ -0.39
Ubp1-201ENSMUST00000009885 Gm10401E9Q3K6 71 aa12.59□□□□□ -0.39
Ubp1-201ENSMUST00000009885 Gm11213A0A1B0GR83 88 aa12.59□□□□□ -0.39
Ubp1-201ENSMUST00000009885 Tex15F8VPN2 2785 aa12.58□□□□□ -0.4
Ubp1-201ENSMUST00000009885 Usp24B1AY13 2617 aaKnown RBP12.58□□□□□ -0.4
Ubp1-201ENSMUST00000009885 A330070K13RikQ8CA53 115 aa12.58□□□□□ -0.4
Ubp1-201ENSMUST00000009885 Gm9767G3X930 207 aa12.56□□□□□ -0.4
Ubp1-201ENSMUST00000009885 Igkv3-2A0A075B5P0 119 aa12.55□□□□□ -0.4
Ubp1-201ENSMUST00000009885 A730009L09RikA0A1B0GS82 72 aa12.55□□□□□ -0.4
Ubp1-201ENSMUST00000009885 Cmc4Q61908 68 aa12.55□□□□□ -0.4
Ubp1-201ENSMUST00000009885 AY074887Q8R5F9 132 aa12.55□□□□□ -0.4
Ubp1-201ENSMUST00000009885 Tcl1b5P56845 121 aa12.54□□□□□ -0.4
Ubp1-201ENSMUST00000009885 Gm37389A0A0A6YW05 95 aa12.52□□□□□ -0.4
Ubp1-201ENSMUST00000009885 Pou2af1Q64693 256 aa12.52□□□□□ -0.4
Ubp1-201ENSMUST00000009885 Gm10197F6QEY5 67 aa12.52□□□□□ -0.41
Ubp1-201ENSMUST00000009885 Tenm3Q9WTS6 2715 aa12.52□□□□□ -0.41
Ubp1-201ENSMUST00000009885 Ighv2-2A0A075B5P8 116 aa12.52□□□□□ -0.41
Ubp1-201ENSMUST00000009885 Gm28374F6SG70 93 aa12.52□□□□□ -0.41
Ubp1-201ENSMUST00000009885 P01821 116 aa12.52□□□□□ -0.41
Ubp1-201ENSMUST00000009885 Spint4Q9D263 159 aa12.52□□□□□ -0.41
Ubp1-201ENSMUST00000009885 Gm17521F6QAC8 156 aa12.51□□□□□ -0.41
Ubp1-201ENSMUST00000009885 Sprr2jO70561 109 aa12.51□□□□□ -0.41
Ubp1-201ENSMUST00000009885 A730071L15RikQ8C4X0 137 aa12.51□□□□□ -0.41
Ubp1-201ENSMUST00000009885 Defb2P82020 71 aa12.51□□□□□ -0.41
Ubp1-201ENSMUST00000009885 Elof1P60003 83 aa12.49□□□□□ -0.41
Ubp1-201ENSMUST00000009885 Gm17509Q9CZ61 145 aa12.49□□□□□ -0.41
Ubp1-201ENSMUST00000009885 H2al1bA0A087WP11 105 aa12.48□□□□□ -0.41
Ubp1-201ENSMUST00000009885 H2al1kJ3QP08 105 aa12.48□□□□□ -0.41
Ubp1-201ENSMUST00000009885 H2al1eQ810S6 105 aa12.48□□□□□ -0.41
Ubp1-201ENSMUST00000009885 H2al1mQ9DAD9 105 aa12.48□□□□□ -0.41
Ubp1-201ENSMUST00000009885 C130032M10RikQ8C888 123 aa12.47□□□□□ -0.41
Ubp1-201ENSMUST00000009885 CrygfQ9CXV3 174 aa12.47□□□□□ -0.41
Ubp1-201ENSMUST00000009885 Bean1Q9EQG5 255 aa12.47□□□□□ -0.41
Ubp1-201ENSMUST00000009885 Ube2bP63147 152 aa12.46□□□□□ -0.41
Ubp1-201ENSMUST00000009885 Pdzd2E9Q1M1 2796 aa12.46□□□□□ -0.41
Ubp1-201ENSMUST00000009885 AtrQ9JKK8 2635 aa12.46□□□□□ -0.42
Ubp1-201ENSMUST00000009885 Csmd2V9GX34 3611 aa12.45□□□□□ -0.42
Ubp1-201ENSMUST00000009885 Coa6Q8BGD8 79 aa12.45□□□□□ -0.42
Ubp1-201ENSMUST00000009885 Smim29Q8R043 75 aa12.44□□□□□ -0.42
Ubp1-201ENSMUST00000009885 Q8BT88 171 aa12.43□□□□□ -0.42
Ubp1-201ENSMUST00000009885 Trav14-1A0A0G2JF94 121 aa12.42□□□□□ -0.42
Ubp1-201ENSMUST00000009885 Gm44790A0A0N4SV91 103 aa12.4□□□□□ -0.42
Ubp1-201ENSMUST00000009885 Gm3233E9Q2H5 230 aa12.4□□□□□ -0.42
Ubp1-201ENSMUST00000009885 Cox6a2P43023 97 aa12.4□□□□□ -0.42
Ubp1-201ENSMUST00000009885 Igkv4-92A0A0B4J1I2 117 aa12.4□□□□□ -0.42
Ubp1-201ENSMUST00000009885 Mrpl34Q99N91 92 aa12.4□□□□□ -0.42
Ubp1-201ENSMUST00000009885 ApcQ61315 2845 aa12.38□□□□□ -0.43
Ubp1-201ENSMUST00000009885 9230102O04RikA2ASX7 82 aa12.38□□□□□ -0.43
Ubp1-201ENSMUST00000009885 Atox1O08997 68 aaKnown RBP12.37□□□□□ -0.43
Ubp1-201ENSMUST00000009885 Krtap24-1G3X9A2 248 aa12.36□□□□□ -0.43
Ubp1-201ENSMUST00000009885 Wfdc13Q5DQQ6 81 aa12.36□□□□□ -0.43
Ubp1-201ENSMUST00000009885 Psors1c2Q80ZC9 134 aa12.36□□□□□ -0.43
Ubp1-201ENSMUST00000009885 CubnQ9JLB4 3623 aa12.36□□□□□ -0.43
Ubp1-201ENSMUST00000009885 Ighv8-13A0A075B5Y0 101 aa12.33□□□□□ -0.44
Ubp1-201ENSMUST00000009885 Igkv8-19A0A0G2JFN8 121 aa12.32□□□□□ -0.44
Ubp1-201ENSMUST00000009885 Snhg11Q4G0K9 87 aa12.32□□□□□ -0.44
Ubp1-201ENSMUST00000009885 Nbeal2Q6ZQA0 2742 aa12.31□□□□□ -0.44
Ubp1-201ENSMUST00000009885 Gm11565A2A4M7 156 aa12.31□□□□□ -0.44
Ubp1-201ENSMUST00000009885 Cdc42se1Q8BHL7 80 aa12.3□□□□□ -0.44
Ubp1-201ENSMUST00000009885 Erdr1J3QMM0 206 aa12.3□□□□□ -0.44
Ubp1-201ENSMUST00000009885 Sslp1Q3UN54 99 aa12.29□□□□□ -0.44
Ubp1-201ENSMUST00000009885 AI606181Q8C7B9 129 aa12.29□□□□□ -0.44
Ubp1-201ENSMUST00000009885 PscaP57096 123 aa12.29□□□□□ -0.44
Ubp1-201ENSMUST00000009885 1700074P13RikQ9D9G7 251 aa12.28□□□□□ -0.44
Ubp1-201ENSMUST00000009885 Reg3aO09037 175 aa12.28□□□□□ -0.44
Ubp1-201ENSMUST00000009885 1700018G05RikA0A1B0GSI2 66 aa12.27□□□□□ -0.44
Ubp1-201ENSMUST00000009885 Nsd1O88491 2588 aaKnown RBP12.27□□□□□ -0.44
Ubp1-201ENSMUST00000009885 Obox2E9PXV9 151 aa12.27□□□□□ -0.45
Ubp1-201ENSMUST00000009885 Fn1P11276 2477 aaKnown RBP12.27□□□□□ -0.45
Ubp1-201ENSMUST00000009885 Igkv3-4A0A140T8Q4 119 aa12.25□□□□□ -0.45
Ubp1-201ENSMUST00000009885 Defb38Q7TNV7 63 aa12.25□□□□□ -0.45
Ubp1-201ENSMUST00000009885 Sprr4Q8CGN8 76 aa12.25□□□□□ -0.45
Ubp1-201ENSMUST00000009885 Vpreb3D3Z6J4 130 aa12.25□□□□□ -0.45
Ubp1-201ENSMUST00000009885 Fam168bQ80XQ8 194 aa12.25□□□□□ -0.45
Ubp1-201ENSMUST00000009885 Coa5Q99M07 74 aa12.24□□□□□ -0.45
Ubp1-201ENSMUST00000009885 A0A286YE49 62 aa12.24□□□□□ -0.45
Ubp1-201ENSMUST00000009885 Stab1Q8R4Y4 2571 aa12.24□□□□□ -0.45
Ubp1-201ENSMUST00000009885 Gm21886J3QJU9 214 aa12.23□□□□□ -0.45
Ubp1-201ENSMUST00000009885 Sec61gP60060 68 aa12.23□□□□□ -0.45
Ubp1-201ENSMUST00000009885 CicQ924A2 2510 aa12.21□□□□□ -0.45
Ubp1-201ENSMUST00000009885 Col6a5A6H584 2640 aa12.21□□□□□ -0.46
Ubp1-201ENSMUST00000009885 Gm12353A2AGJ4 60 aa12.21□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 45.9 ms