RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Chtf8P0CG14 533 aa8.22□□□□□ -1.09
Pcdhac1-201ENSMUST00000007584 Phf5aP83870 110 aaKnown RBP8.22□□□□□ -1.09
Pcdhac1-201ENSMUST00000007584 Ly6g6cQ9Z1Q4 126 aa8.22□□□□□ -1.09
Pcdhac1-201ENSMUST00000007584 Prol1E9PYQ4 312 aa8.21□□□□□ -1.09
Pcdhac1-201ENSMUST00000007584 Gm10772F7AIG4 85 aa8.21□□□□□ -1.09
Pcdhac1-201ENSMUST00000007584 E130208F15RikQ3UPV3 143 aa8.21□□□□□ -1.09
Pcdhac1-201ENSMUST00000007584 Spaca4Q80ZQ0 127 aa8.21□□□□□ -1.1
Pcdhac1-201ENSMUST00000007584 Gpr15lA0A0B4J1N3 78 aa8.19□□□□□ -1.1
Pcdhac1-201ENSMUST00000007584 SetxA2AKX3 2646 aa8.18□□□□□ -1.1
Pcdhac1-201ENSMUST00000007584 UtrnE9Q6R7 3430 aa8.17□□□□□ -1.1
Pcdhac1-201ENSMUST00000007584 Usp9yF8VPU6 2556 aa8.16□□□□□ -1.1
Pcdhac1-201ENSMUST00000007584 AY074887Q8R5F9 132 aa8.16□□□□□ -1.1
Pcdhac1-201ENSMUST00000007584 Gm10837Q3UTT8 145 aa8.16□□□□□ -1.1
Pcdhac1-201ENSMUST00000007584 Bahcc1Q3UHR0 2643 aa8.16□□□□□ -1.1
Pcdhac1-201ENSMUST00000007584 Defb2P82020 71 aa8.16□□□□□ -1.1
Pcdhac1-201ENSMUST00000007584 Fam168bQ80XQ8 194 aa8.16□□□□□ -1.1
Pcdhac1-201ENSMUST00000007584 Snhg11Q4G0K9 87 aa8.15□□□□□ -1.1
Pcdhac1-201ENSMUST00000007584 Cep192E9Q4Y4 2514 aaKnown RBP8.14□□□□□ -1.11
Pcdhac1-201ENSMUST00000007584 Psors1c2Q80ZC9 134 aa8.12□□□□□ -1.11
Pcdhac1-201ENSMUST00000007584 Gm9573F7C950 1606 aa8.12□□□□□ -1.11
Pcdhac1-201ENSMUST00000007584 Gm16181B0V2H2 73 aa8.11□□□□□ -1.11
Pcdhac1-201ENSMUST00000007584 Piezo1E2JF22 2547 aa8.11□□□□□ -1.11
Pcdhac1-201ENSMUST00000007584 Gm7276Q3TYW4 209 aa8.1□□□□□ -1.11
Pcdhac1-201ENSMUST00000007584 Gm27235Q3UW50 83 aa8.1□□□□□ -1.11
Pcdhac1-201ENSMUST00000007584 CriptO70333 101 aa8.09□□□□□ -1.11
Pcdhac1-201ENSMUST00000007584 Pla2g10Q9QXX3 151 aa8.09□□□□□ -1.11
Pcdhac1-201ENSMUST00000007584 Krtap11-1E9Q2E9 183 aa8.08□□□□□ -1.12
Pcdhac1-201ENSMUST00000007584 Krtap26-1Q9D7N2 215 aa8.08□□□□□ -1.12
Pcdhac1-201ENSMUST00000007584 TrrapQ80YV3 2565 aaKnown RBP8.08□□□□□ -1.12
Pcdhac1-201ENSMUST00000007584 Sprr4Q8CGN8 76 aa8.07□□□□□ -1.12
Pcdhac1-201ENSMUST00000007584 Srsf12Q8C8K3 266 aa8.05□□□□□ -1.12
Pcdhac1-201ENSMUST00000007584 Gm3880A0A1B0GSB3 72 aa8.05□□□□□ -1.12
Pcdhac1-201ENSMUST00000007584 Ep400Q8CHI8 3072 aaKnown RBP8.05□□□□□ -1.12
Pcdhac1-201ENSMUST00000007584 Cypt15B1AXS0 87 aa8.04□□□□□ -1.12
Pcdhac1-201ENSMUST00000007584 C530025M09RikF6RGA8 229 aa8.04□□□□□ -1.12
Pcdhac1-201ENSMUST00000007584 Gm21798J3QNU5 87 aa8.04□□□□□ -1.12
Pcdhac1-201ENSMUST00000007584 Cystm1Q8K353 104 aa8.01□□□□□ -1.13
Pcdhac1-201ENSMUST00000007584 Myo18bE9PV66 2605 aa8.01□□□□□ -1.13
Pcdhac1-201ENSMUST00000007584 Gm20538F6Z9R1 75 aa8.01□□□□□ -1.13
Pcdhac1-201ENSMUST00000007584 Spata3Q9D9T6 193 aa8.01□□□□□ -1.13
Pcdhac1-201ENSMUST00000007584 Sprr1bQ62267 153 aa8□□□□□ -1.13
Pcdhac1-201ENSMUST00000007584 HrnrQ8VHD8 2496 aa7.97□□□□□ -1.13
Pcdhac1-201ENSMUST00000007584 Gm3646F6S692 53 aa7.96□□□□□ -1.13
Pcdhac1-201ENSMUST00000007584 2310034C09RikQ9D746 214 aa7.96□□□□□ -1.13
Pcdhac1-201ENSMUST00000007584 Gm26620Q9CY65 116 aa7.96□□□□□ -1.13
Pcdhac1-201ENSMUST00000007584 Gm9821Q8K076 103 aa7.93□□□□□ -1.14
Pcdhac1-201ENSMUST00000007584 Lypd5Q9D7Z7 256 aa7.92□□□□□ -1.14
Pcdhac1-201ENSMUST00000007584 Defb10Q8R2I8 73 aa7.9□□□□□ -1.14
Pcdhac1-201ENSMUST00000007584 Fn1P11276 2477 aaKnown RBP7.9□□□□□ -1.15
Pcdhac1-201ENSMUST00000007584 Anapc11Q9CPX9 84 aa7.9□□□□□ -1.15
Pcdhac1-201ENSMUST00000007584 Zcchc13Q9D548 170 aa7.89□□□□□ -1.15
Pcdhac1-201ENSMUST00000007584 Krtap24-1G3X9A2 248 aa7.88□□□□□ -1.15
Pcdhac1-201ENSMUST00000007584 FasnP19096 2504 aaKnown RBP7.87□□□□□ -1.15
Pcdhac1-201ENSMUST00000007584 Col5a1O88207 1838 aa7.86□□□□□ -1.15
Pcdhac1-201ENSMUST00000007584 1700042G07RikB1AUF7 90 aa7.86□□□□□ -1.15
Pcdhac1-201ENSMUST00000007584 Col27a1Q5QNQ9 1845 aa7.86□□□□□ -1.15
Pcdhac1-201ENSMUST00000007584 Usp34Q6ZQ93 3582 aa7.86□□□□□ -1.15
Pcdhac1-201ENSMUST00000007584 CicQ924A2 2510 aa7.86□□□□□ -1.15
Pcdhac1-201ENSMUST00000007584 Abca12E9Q876 2595 aa7.86□□□□□ -1.15
Pcdhac1-201ENSMUST00000007584 Smim29Q8R043 75 aa7.85□□□□□ -1.15
Pcdhac1-201ENSMUST00000007584 Ankrd11E9Q4F7 2643 aa7.85□□□□□ -1.15
Pcdhac1-201ENSMUST00000007584 Unc79Q0KK59 2596 aa7.85□□□□□ -1.15
Pcdhac1-201ENSMUST00000007584 Gm10320E9PW43 113 aa7.85□□□□□ -1.15
Pcdhac1-201ENSMUST00000007584 6030445D17RikE9Q8F9 148 aa7.85□□□□□ -1.15
Pcdhac1-201ENSMUST00000007584 Gm3285A0A1W2P7U0 201 aa7.83□□□□□ -1.16
Pcdhac1-201ENSMUST00000007584 Defb9Q8R2I6 67 aa7.82□□□□□ -1.16
Pcdhac1-201ENSMUST00000007584 Gm3250E9Q1M3 230 aa7.82□□□□□ -1.16
Pcdhac1-201ENSMUST00000007584 Gm9955Q8CEJ8 102 aa7.81□□□□□ -1.16
Pcdhac1-201ENSMUST00000007584 Usp24B1AY13 2617 aaKnown RBP7.8□□□□□ -1.16
Pcdhac1-201ENSMUST00000007584 Fam104aA2A6P4 185 aa7.79□□□□□ -1.16
Pcdhac1-201ENSMUST00000007584 Gm42715A0A087WP63 3095 aaKnown RBP7.79□□□□□ -1.16
Pcdhac1-201ENSMUST00000007584 Col4a4Q9QZR9 1682 aa7.77□□□□□ -1.17
Pcdhac1-201ENSMUST00000007584 Cypt14J3QPF7 87 aa7.77□□□□□ -1.17
Pcdhac1-201ENSMUST00000007584 Kmt2bO08550 2713 aa7.76□□□□□ -1.17
Pcdhac1-201ENSMUST00000007584 4933415A04RikQ9D443 101 aa7.75□□□□□ -1.17
Pcdhac1-201ENSMUST00000007584 Cep350E9Q309 3095 aa7.75□□□□□ -1.17
Pcdhac1-201ENSMUST00000007584 SmcpP15265 143 aa7.75□□□□□ -1.17
Pcdhac1-201ENSMUST00000007584 Lama3Q61789 3330 aa7.72□□□□□ -1.17
Pcdhac1-201ENSMUST00000007584 Dnah12Q3V0Q1 3086 aa7.69□□□□□ -1.18
Pcdhac1-201ENSMUST00000007584 Notch1Q01705 2531 aa7.69□□□□□ -1.18
Pcdhac1-201ENSMUST00000007584 Ankrd17Q99NH0 2603 aaKnown RBP7.67□□□□□ -1.18
Pcdhac1-201ENSMUST00000007584 Nsd1O88491 2588 aaKnown RBP7.66□□□□□ -1.18
Pcdhac1-201ENSMUST00000007584 A730071L15RikQ8C4X0 137 aa7.64□□□□□ -1.19
Pcdhac1-201ENSMUST00000007584 Plac8Q9JI48 112 aa7.64□□□□□ -1.19
Pcdhac1-201ENSMUST00000007584 Gcn1E9PVA8 2671 aaKnown RBP7.62□□□□□ -1.19
Pcdhac1-201ENSMUST00000007584 Gm4491E0CX42 125 aa7.62□□□□□ -1.19
Pcdhac1-201ENSMUST00000007584 Gm37013Q8K491 104 aa7.61□□□□□ -1.19
Pcdhac1-201ENSMUST00000007584 PcntP48725 2898 aa7.61□□□□□ -1.19
Pcdhac1-201ENSMUST00000007584 Prrc2cQ3TLH4 2846 aaKnown RBP7.59□□□□□ -1.19
Pcdhac1-201ENSMUST00000007584 Col4a2P08122 1707 aa7.58□□□□□ -1.2
Pcdhac1-201ENSMUST00000007584 TrioQ0KL02 3102 aa7.58□□□□□ -1.2
Pcdhac1-201ENSMUST00000007584 Defb11Q8R2I7 77 aa7.57□□□□□ -1.2
Pcdhac1-201ENSMUST00000007584 Odf3bQ5M8M2 238 aa7.57□□□□□ -1.2
Pcdhac1-201ENSMUST00000007584 Romo1P60603 79 aa7.56□□□□□ -1.2
Pcdhac1-201ENSMUST00000007584 Spink7Q6IE32 76 aa7.55□□□□□ -1.2
Pcdhac1-201ENSMUST00000007584 Zfp292Q9Z2U2 2698 aa7.55□□□□□ -1.2
Pcdhac1-201ENSMUST00000007584 Akap13E9Q394 2776 aa7.51□□□□□ -1.21
Pcdhac1-201ENSMUST00000007584 Rpl37Q9D823 97 aa7.51□□□□□ -1.21
Pcdhac1-201ENSMUST00000007584 HttP42859 3119 aa7.49□□□□□ -1.21
Pcdhac1-201ENSMUST00000007584 Gm10139O88245 57 aa7.48□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 105.5 ms