RNA–Protein interactions for RNA: ENSMUST00000171404.7

Gtf3c4-204, Transcript of General transcription factor 3C polypeptide 4, mousemouse

TSL 1 (best) BASIC

Gene Gtf3c4, Length 7,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c4-204ENSMUST00000171404 6430550D23RikE9Q1X6 194 aa11.13□□□□□ -0.63
Gtf3c4-204ENSMUST00000171404 Gm10999F6Q4M4 69 aa11.13□□□□□ -0.63
Gtf3c4-204ENSMUST00000171404 Hcfc1Q61191 2045 aaKnown RBP11.12□□□□□ -0.63
Gtf3c4-204ENSMUST00000171404 Gvin1Q80SU7 2427 aa11.12□□□□□ -0.63
Gtf3c4-204ENSMUST00000171404 Gm9573F7C950 1606 aa11.11□□□□□ -0.63
Gtf3c4-204ENSMUST00000171404 Defb50Q6TU36 73 aa11.1□□□□□ -0.63
Gtf3c4-204ENSMUST00000171404 Chchd10Q7TNL9 138 aa11.1□□□□□ -0.63
Gtf3c4-204ENSMUST00000171404 1810062G17RikG3X8Y2 129 aa11.1□□□□□ -0.63
Gtf3c4-204ENSMUST00000171404 Gm3250E9Q1M3 230 aa11.08□□□□□ -0.64
Gtf3c4-204ENSMUST00000171404 Rtl10D3YWW5 146 aa11.08□□□□□ -0.64
Gtf3c4-204ENSMUST00000171404 B430305J03RikQ8BQQ8 176 aa11.08□□□□□ -0.64
Gtf3c4-204ENSMUST00000171404 AI606181Q8C7B9 129 aa11.08□□□□□ -0.64
Gtf3c4-204ENSMUST00000171404 Gm12216A0A1W2P827 62 aa11.07□□□□□ -0.64
Gtf3c4-204ENSMUST00000171404 Ighv2-5A0A0A6YY69 116 aa11.07□□□□□ -0.64
Gtf3c4-204ENSMUST00000171404 Cox6a2P43023 97 aa11.06□□□□□ -0.64
Gtf3c4-204ENSMUST00000171404 A830031A19RikQ8BNT5 113 aa11.06□□□□□ -0.64
Gtf3c4-204ENSMUST00000171404 Msrb1Q9JLC3 116 aa11.06□□□□□ -0.64
Gtf3c4-204ENSMUST00000171404 Phf5aP83870 110 aaKnown RBP11.06□□□□□ -0.64
Gtf3c4-204ENSMUST00000171404 Myo9aQ8C170 2542 aa11.05□□□□□ -0.64
Gtf3c4-204ENSMUST00000171404 Flg2Q2VIS4 2362 aa11.04□□□□□ -0.64
Gtf3c4-204ENSMUST00000171404 Prol1E9PYQ4 312 aa11.04□□□□□ -0.64
Gtf3c4-204ENSMUST00000171404 AcacbE9Q4Z2 2448 aa11.04□□□□□ -0.64
Gtf3c4-204ENSMUST00000171404 OtoglF7A4A7 2325 aa11.04□□□□□ -0.64
Gtf3c4-204ENSMUST00000171404 Rpl37aP61514 92 aa11.02□□□□□ -0.65
Gtf3c4-204ENSMUST00000171404 Gm9903Q8C9Y8 129 aa11.02□□□□□ -0.65
Gtf3c4-204ENSMUST00000171404 Defb45Q3V490 66 aa11.01□□□□□ -0.65
Gtf3c4-204ENSMUST00000171404 Gm10549Q3URY4 149 aa11□□□□□ -0.65
Gtf3c4-204ENSMUST00000171404 Spaca4Q80ZQ0 127 aa10.99□□□□□ -0.65
Gtf3c4-204ENSMUST00000171404 Gm43218A0A0G2JGT0 114 aa10.99□□□□□ -0.65
Gtf3c4-204ENSMUST00000171404 Sostdc1Q9CQN4 206 aa10.98□□□□□ -0.65
Gtf3c4-204ENSMUST00000171404 Q9DAB9 146 aa10.98□□□□□ -0.65
Gtf3c4-204ENSMUST00000171404 A930002H24RikQ8C8Y3 163 aa10.98□□□□□ -0.65
Gtf3c4-204ENSMUST00000171404 Csdc2Q91YQ3 154 aa10.97□□□□□ -0.65
Gtf3c4-204ENSMUST00000171404 2310034G01RikA0A286YDL3 209 aa10.97□□□□□ -0.65
Gtf3c4-204ENSMUST00000171404 4930518I15RikQ3V2W7 57 aa10.97□□□□□ -0.65
Gtf3c4-204ENSMUST00000171404 Snhg11Q4G0K9 87 aa10.97□□□□□ -0.65
Gtf3c4-204ENSMUST00000171404 Fam19a3Q7TPG6 132 aa10.97□□□□□ -0.65
Gtf3c4-204ENSMUST00000171404 Pkd1l2Q7TN88 2461 aa10.96□□□□□ -0.65
Gtf3c4-204ENSMUST00000171404 Gm44790A0A0N4SV91 103 aa10.96□□□□□ -0.65
Gtf3c4-204ENSMUST00000171404 Gm10197F6QEY5 67 aa10.96□□□□□ -0.66
Gtf3c4-204ENSMUST00000171404 BC025920Q3US60 128 aa10.96□□□□□ -0.66
Gtf3c4-204ENSMUST00000171404 Gm5617Q91VN2 117 aa10.95□□□□□ -0.66
Gtf3c4-204ENSMUST00000171404 AplnQ9R0R4 77 aa10.95□□□□□ -0.66
Gtf3c4-204ENSMUST00000171404 Gpr15lA0A0B4J1N3 78 aa10.95□□□□□ -0.66
Gtf3c4-204ENSMUST00000171404 Gm10160F6Y577 67 aa10.94□□□□□ -0.66
Gtf3c4-204ENSMUST00000171404 Abca2P41234 2434 aa10.93□□□□□ -0.66
Gtf3c4-204ENSMUST00000171404 E130208F15RikQ3UPV3 143 aa10.93□□□□□ -0.66
Gtf3c4-204ENSMUST00000171404 Spint4Q9D263 159 aa10.93□□□□□ -0.66
Gtf3c4-204ENSMUST00000171404 P01819 144 aa10.92□□□□□ -0.66
Gtf3c4-204ENSMUST00000171404 Gm21886J3QJU9 214 aa10.92□□□□□ -0.66
Gtf3c4-204ENSMUST00000171404 Dmac1Q9CQ00 111 aa10.9□□□□□ -0.66
Gtf3c4-204ENSMUST00000171404 Gm20661K7N787 53 aa10.9□□□□□ -0.66
Gtf3c4-204ENSMUST00000171404 Igkv8-27A0A0G2JF28 120 aa10.89□□□□□ -0.67
Gtf3c4-204ENSMUST00000171404 Fam168bQ80XQ8 194 aa10.89□□□□□ -0.67
Gtf3c4-204ENSMUST00000171404 Cdip1Q9DB75 208 aa10.89□□□□□ -0.67
Gtf3c4-204ENSMUST00000171404 Znf414Q9DCK4 299 aa10.87□□□□□ -0.67
Gtf3c4-204ENSMUST00000171404 Coa6Q8BGD8 79 aa10.87□□□□□ -0.67
Gtf3c4-204ENSMUST00000171404 Nav2E9Q842 2432 aa10.87□□□□□ -0.67
Gtf3c4-204ENSMUST00000171404 Hivep2Q3UHF7 2430 aa10.86□□□□□ -0.67
Gtf3c4-204ENSMUST00000171404 Krtap24-1G3X9A2 248 aa10.84□□□□□ -0.67
Gtf3c4-204ENSMUST00000171404 Gm16181B0V2H2 73 aa10.84□□□□□ -0.67
Gtf3c4-204ENSMUST00000171404 Gm10770F7D043 238 aa10.84□□□□□ -0.67
Gtf3c4-204ENSMUST00000171404 Gm11627A6PWP4 55 aa10.83□□□□□ -0.68
Gtf3c4-204ENSMUST00000171404 Phxr5P08399 672 aa10.83□□□□□ -0.68
Gtf3c4-204ENSMUST00000171404 Elof1P60003 83 aa10.82□□□□□ -0.68
Gtf3c4-204ENSMUST00000171404 3110070M22RikQ9DAQ7 118 aa10.81□□□□□ -0.68
Gtf3c4-204ENSMUST00000171404 CrygaP04345 174 aa10.8□□□□□ -0.68
Gtf3c4-204ENSMUST00000171404 AI854703Q8BIN3 203 aa10.79□□□□□ -0.68
Gtf3c4-204ENSMUST00000171404 A530084C06RikQ3UTW2 186 aa10.77□□□□□ -0.68
Gtf3c4-204ENSMUST00000171404 BC067074F6RXI4 2391 aa10.77□□□□□ -0.69
Gtf3c4-204ENSMUST00000171404 Gm10837Q3UTT8 145 aa10.77□□□□□ -0.69
Gtf3c4-204ENSMUST00000171404 Q8BGJ3 129 aa10.76□□□□□ -0.69
Gtf3c4-204ENSMUST00000171404 MobpQ9D2P8 170 aa10.75□□□□□ -0.69
Gtf3c4-204ENSMUST00000171404 Rif1Q6PR54 2419 aaKnown RBP10.74□□□□□ -0.69
Gtf3c4-204ENSMUST00000171404 Krtap11-1E9Q2E9 183 aa10.74□□□□□ -0.69
Gtf3c4-204ENSMUST00000171404 Mp68P56379 58 aa10.74□□□□□ -0.69
Gtf3c4-204ENSMUST00000171404 4930507D05RikQ8C9C9 103 aa10.74□□□□□ -0.69
Gtf3c4-204ENSMUST00000171404 Gm17689B3GLJ4 109 aa10.73□□□□□ -0.69
Gtf3c4-204ENSMUST00000171404 7530416G11RikJ3QJX6 159 aa10.73□□□□□ -0.69
Gtf3c4-204ENSMUST00000171404 Q8BT88 171 aa10.72□□□□□ -0.69
Gtf3c4-204ENSMUST00000171404 Spata3Q9D9T6 193 aa10.72□□□□□ -0.69
Gtf3c4-204ENSMUST00000171404 Ighv2-2A0A075B5P8 116 aa10.7□□□□□ -0.7
Gtf3c4-204ENSMUST00000171404 P01821 116 aa10.7□□□□□ -0.7
Gtf3c4-204ENSMUST00000171404 Gm27235Q3UW50 83 aa10.68□□□□□ -0.7
Gtf3c4-204ENSMUST00000171404 Gm26661M0QWV4 156 aa10.67□□□□□ -0.7
Gtf3c4-204ENSMUST00000171404 Gm10772F7AIG4 85 aa10.67□□□□□ -0.7
Gtf3c4-204ENSMUST00000171404 Rnase13Q5GAM7 153 aa10.65□□□□□ -0.7
Gtf3c4-204ENSMUST00000171404 Lrrk2Q5S006 2527 aa10.65□□□□□ -0.7
Gtf3c4-204ENSMUST00000171404 Crip3Q6Q6R3 243 aa10.64□□□□□ -0.71
Gtf3c4-204ENSMUST00000171404 Limd2Q8BGB5 128 aa10.64□□□□□ -0.71
Gtf3c4-204ENSMUST00000171404 Gm3233E9Q2H5 230 aa10.62□□□□□ -0.71
Gtf3c4-204ENSMUST00000171404 Anapc11Q9CPX9 84 aa10.61□□□□□ -0.71
Gtf3c4-204ENSMUST00000171404 Pla2g10Q9QXX3 151 aa10.6□□□□□ -0.71
Gtf3c4-204ENSMUST00000171404 Coa5Q99M07 74 aa10.6□□□□□ -0.71
Gtf3c4-204ENSMUST00000171404 Nav3Q80TN7 2359 aa10.6□□□□□ -0.71
Gtf3c4-204ENSMUST00000171404 Zfyve26Q5DU37 2529 aa10.57□□□□□ -0.72
Gtf3c4-204ENSMUST00000171404 Smr3aQ61900 147 aa10.55□□□□□ -0.72
Gtf3c4-204ENSMUST00000171404 Cdc42se1Q8BHL7 80 aa10.54□□□□□ -0.72
Gtf3c4-204ENSMUST00000171404 UtrnE9Q6R7 3430 aa10.53□□□□□ -0.72
Gtf3c4-204ENSMUST00000171404 Krtap16-1A2A5X5 502 aa10.53□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 169.8 ms