RNA–Protein interactions for RNA: ENSMUST00000108362.7

Sptbn4-202, Transcript of Spectrin beta chain, mousemouse

TSL 1 (best) BASIC

Gene Sptbn4, Length 4,861 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-202ENSMUST00000108362 Unc79Q0KK59 2596 aa11.55□□□□□ -0.56
Sptbn4-202ENSMUST00000108362 Igkv8-30A0A140T8M3 121 aa11.53□□□□□ -0.56
Sptbn4-202ENSMUST00000108362 Smr3aQ61900 147 aa11.53□□□□□ -0.56
Sptbn4-202ENSMUST00000108362 FshbQ60687 130 aa11.53□□□□□ -0.56
Sptbn4-202ENSMUST00000108362 Abca12E9Q876 2595 aa11.53□□□□□ -0.56
Sptbn4-202ENSMUST00000108362 Gm5153P01627 120 aa11.53□□□□□ -0.56
Sptbn4-202ENSMUST00000108362 C130032M10RikQ8C888 123 aa11.52□□□□□ -0.56
Sptbn4-202ENSMUST00000108362 Col27a1Q5QNQ9 1845 aa11.52□□□□□ -0.56
Sptbn4-202ENSMUST00000108362 Apoc4Q61268 124 aa11.52□□□□□ -0.57
Sptbn4-202ENSMUST00000108362 Gm9767G3X930 207 aa11.51□□□□□ -0.57
Sptbn4-202ENSMUST00000108362 Wfdc3Q14AE4 130 aa11.51□□□□□ -0.57
Sptbn4-202ENSMUST00000108362 BC025920Q3US60 128 aa11.51□□□□□ -0.57
Sptbn4-202ENSMUST00000108362 Psmb11Q8BG41 302 aa11.51□□□□□ -0.57
Sptbn4-202ENSMUST00000108362 Gm10570F6VB42 170 aa11.48□□□□□ -0.57
Sptbn4-202ENSMUST00000108362 D730001G18RikA0A087WQU7 115 aa11.48□□□□□ -0.57
Sptbn4-202ENSMUST00000108362 4930519P11RikQ9CUJ8 166 aa11.48□□□□□ -0.57
Sptbn4-202ENSMUST00000108362 Mki67E9PVX6 3177 aaKnown RBP11.48□□□□□ -0.57
Sptbn4-202ENSMUST00000108362 Coa6Q8BGD8 79 aa11.46□□□□□ -0.57
Sptbn4-202ENSMUST00000108362 Zfand2aQ9JII7 171 aa11.46□□□□□ -0.57
Sptbn4-202ENSMUST00000108362 Znf580Q9DB38 172 aa11.46□□□□□ -0.58
Sptbn4-202ENSMUST00000108362 Wfdc6bF6ULY1 148 aa11.46□□□□□ -0.58
Sptbn4-202ENSMUST00000108362 3110070M22RikQ9DAQ7 118 aa11.46□□□□□ -0.58
Sptbn4-202ENSMUST00000108362 Znf706Q9D115 76 aaKnown RBP11.45□□□□□ -0.58
Sptbn4-202ENSMUST00000108362 Gm10300Q8C8P7 189 aa11.45□□□□□ -0.58
Sptbn4-202ENSMUST00000108362 Ntn5Q3UQ22 452 aa11.44□□□□□ -0.58
Sptbn4-202ENSMUST00000108362 Igkv3-7A0A0G2JE31 119 aa11.44□□□□□ -0.58
Sptbn4-202ENSMUST00000108362 Cd164l2Q9D6W7 172 aa11.44□□□□□ -0.58
Sptbn4-202ENSMUST00000108362 Gm10197F6QEY5 67 aa11.44□□□□□ -0.58
Sptbn4-202ENSMUST00000108362 Ighv2-9A0A075B5Q5 116 aa11.43□□□□□ -0.58
Sptbn4-202ENSMUST00000108362 Spint4Q9D263 159 aa11.43□□□□□ -0.58
Sptbn4-202ENSMUST00000108362 CicQ924A2 2510 aa11.43□□□□□ -0.58
Sptbn4-202ENSMUST00000108362 Prr9Q8BV84 116 aa11.42□□□□□ -0.58
Sptbn4-202ENSMUST00000108362 4930518I15RikQ3V2W7 57 aa11.42□□□□□ -0.58
Sptbn4-202ENSMUST00000108362 Csdc2Q91YQ3 154 aa11.42□□□□□ -0.58
Sptbn4-202ENSMUST00000108362 FasnP19096 2504 aaKnown RBP11.41□□□□□ -0.58
Sptbn4-202ENSMUST00000108362 Cdh23Q99PF4 3354 aa11.41□□□□□ -0.58
Sptbn4-202ENSMUST00000108362 Bean1Q9EQG5 255 aa11.41□□□□□ -0.58
Sptbn4-202ENSMUST00000108362 CenpfE9Q3P4 2997 aaKnown RBP11.4□□□□□ -0.58
Sptbn4-202ENSMUST00000108362 CrygeQ03740 174 aa11.4□□□□□ -0.58
Sptbn4-202ENSMUST00000108362 Wfdc17Q5SSJ1 76 aa11.4□□□□□ -0.58
Sptbn4-202ENSMUST00000108362 Defb45Q3V490 66 aa11.4□□□□□ -0.59
Sptbn4-202ENSMUST00000108362 Cd164Q9R0L9 197 aa11.4□□□□□ -0.59
Sptbn4-202ENSMUST00000108362 Reg3aO09037 175 aa11.39□□□□□ -0.59
Sptbn4-202ENSMUST00000108362 Ighv1-56A0A0A6YXG2 117 aa11.39□□□□□ -0.59
Sptbn4-202ENSMUST00000108362 Defb37Q7TMD2 62 aa11.39□□□□□ -0.59
Sptbn4-202ENSMUST00000108362 Gm17509Q9CZ61 145 aa11.39□□□□□ -0.59
Sptbn4-202ENSMUST00000108362 Odf3l2Q3TZ65 277 aa11.38□□□□□ -0.59
Sptbn4-202ENSMUST00000108362 Hcfc1Q61191 2045 aaKnown RBP11.38□□□□□ -0.59
Sptbn4-202ENSMUST00000108362 Q9DAA7 145 aa11.36□□□□□ -0.59
Sptbn4-202ENSMUST00000108362 Gm16485Q8C4B7 115 aa11.35□□□□□ -0.59
Sptbn4-202ENSMUST00000108362 Defb2P82020 71 aa11.35□□□□□ -0.59
Sptbn4-202ENSMUST00000108362 Fam19a3Q7TPG6 132 aa11.35□□□□□ -0.59
Sptbn4-202ENSMUST00000108362 Gm28230A0A0A0MQ91 144 aa11.35□□□□□ -0.59
Sptbn4-202ENSMUST00000108362 Col5a1O88207 1838 aa11.34□□□□□ -0.59
Sptbn4-202ENSMUST00000108362 Igkv8-28A0A0G2JE47 121 aa11.34□□□□□ -0.59
Sptbn4-202ENSMUST00000108362 6430550D23RikE9Q1X6 194 aa11.34□□□□□ -0.59
Sptbn4-202ENSMUST00000108362 AI854703Q8BIN3 203 aa11.33□□□□□ -0.6
Sptbn4-202ENSMUST00000108362 Gm4707V9GXN5 68 aa11.33□□□□□ -0.6
Sptbn4-202ENSMUST00000108362 Gm5464Q3UY29 175 aa11.32□□□□□ -0.6
Sptbn4-202ENSMUST00000108362 Sostdc1Q9CQN4 206 aa11.32□□□□□ -0.6
Sptbn4-202ENSMUST00000108362 Cep192E9Q4Y4 2514 aaKnown RBP11.32□□□□□ -0.6
Sptbn4-202ENSMUST00000108362 Bri3P28662 125 aa11.31□□□□□ -0.6
Sptbn4-202ENSMUST00000108362 A530084C06RikQ3UTW2 186 aa11.31□□□□□ -0.6
Sptbn4-202ENSMUST00000108362 Adm2Q7TNK8 150 aa11.3□□□□□ -0.6
Sptbn4-202ENSMUST00000108362 Ighv8-13A0A075B5Y0 101 aa11.3□□□□□ -0.6
Sptbn4-202ENSMUST00000108362 Fn1P11276 2477 aaKnown RBP11.28□□□□□ -0.6
Sptbn4-202ENSMUST00000108362 Unc80Q8BLN6 3261 aa11.28□□□□□ -0.6
Sptbn4-202ENSMUST00000108362 Col4a2P08122 1707 aa11.28□□□□□ -0.6
Sptbn4-202ENSMUST00000108362 Krtap16-1A2A5X5 502 aa11.28□□□□□ -0.6
Sptbn4-202ENSMUST00000108362 Rps28P62858 69 aaKnown RBP11.28□□□□□ -0.6
Sptbn4-202ENSMUST00000108362 Mrpl34Q99N91 92 aa11.28□□□□□ -0.6
Sptbn4-202ENSMUST00000108362 Szt2A2A9C3 3431 aa11.27□□□□□ -0.6
Sptbn4-202ENSMUST00000108362 1600014C23RikQ9DAX4 101 aa11.27□□□□□ -0.6
Sptbn4-202ENSMUST00000108362 P01819 144 aa11.27□□□□□ -0.61
Sptbn4-202ENSMUST00000108362 Cox6a2P43023 97 aa11.26□□□□□ -0.61
Sptbn4-202ENSMUST00000108362 Usp24B1AY13 2617 aaKnown RBP11.26□□□□□ -0.61
Sptbn4-202ENSMUST00000108362 Msrb1Q9JLC3 116 aa11.25□□□□□ -0.61
Sptbn4-202ENSMUST00000108362 Gm10160F6Y577 67 aa11.25□□□□□ -0.61
Sptbn4-202ENSMUST00000108362 Defb39Q70KL3 74 aa11.25□□□□□ -0.61
Sptbn4-202ENSMUST00000108362 Ighv2-5A0A0A6YY69 116 aa11.24□□□□□ -0.61
Sptbn4-202ENSMUST00000108362 FlnbQ80X90 2602 aaKnown RBP11.24□□□□□ -0.61
Sptbn4-202ENSMUST00000108362 Tnrc18Q80WC3 2878 aa11.24□□□□□ -0.61
Sptbn4-202ENSMUST00000108362 Gm21886J3QJU9 214 aa11.24□□□□□ -0.61
Sptbn4-202ENSMUST00000108362 Igkv8-27A0A0G2JF28 120 aa11.23□□□□□ -0.61
Sptbn4-202ENSMUST00000108362 Prr13Q9CQJ5 137 aa11.23□□□□□ -0.61
Sptbn4-202ENSMUST00000108362 Gm7173A0A0G2JEB6 3132 aa11.22□□□□□ -0.61
Sptbn4-202ENSMUST00000108362 1700018G05RikA0A1B0GSI2 66 aa11.22□□□□□ -0.61
Sptbn4-202ENSMUST00000108362 A730009L09RikA0A1B0GS82 72 aa11.22□□□□□ -0.61
Sptbn4-202ENSMUST00000108362 CrygaP04345 174 aa11.21□□□□□ -0.61
Sptbn4-202ENSMUST00000108362 2310034G01RikA0A286YDL3 209 aa11.21□□□□□ -0.62
Sptbn4-202ENSMUST00000108362 Col12a1Q60847 3120 aa11.21□□□□□ -0.62
Sptbn4-202ENSMUST00000108362 MobpQ9D2P8 170 aa11.2□□□□□ -0.62
Sptbn4-202ENSMUST00000108362 Ly6g6cQ9Z1Q4 126 aa11.18□□□□□ -0.62
Sptbn4-202ENSMUST00000108362 Gm44790A0A0N4SV91 103 aa11.17□□□□□ -0.62
Sptbn4-202ENSMUST00000108362 Chd7A2AJK6 2986 aaKnown RBP11.16□□□□□ -0.62
Sptbn4-202ENSMUST00000108362 Zfp292Q9Z2U2 2698 aa11.16□□□□□ -0.62
Sptbn4-202ENSMUST00000108362 Ighv2-2A0A075B5P8 116 aa11.16□□□□□ -0.62
Sptbn4-202ENSMUST00000108362 P01821 116 aa11.16□□□□□ -0.62
Sptbn4-202ENSMUST00000108362 7530416G11RikJ3QJX6 159 aa11.14□□□□□ -0.63
Sptbn4-202ENSMUST00000108362 Gm43218A0A0G2JGT0 114 aa11.14□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 43.5 ms