RNA–Protein interactions for RNA: ENSMUST00000100164.4

Hoxc4-201, Transcript of Homeobox protein Hox-C4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxc4, Length 1,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4-201ENSMUST00000100164 Trav13n-2A0A0G2JF93 110 aa9.72□□□□□ -0.85
Hoxc4-201ENSMUST00000100164 Zfp462B1AWL2 2495 aaKnown RBP9.72□□□□□ -0.85
Hoxc4-201ENSMUST00000100164 Lamtor3O88653 124 aa9.72□□□□□ -0.85
Hoxc4-201ENSMUST00000100164 B230359F08RikA0A0B4J1K3 109 aa9.71□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 Gm10772F7AIG4 85 aa9.71□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 B230307C23RikQ8BLB2 64 aa9.71□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 Gm9903Q8C9Y8 129 aa9.71□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 Mrpl55Q9CZ83 127 aa9.71□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 H2al1bA0A087WP11 105 aa9.7□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 Ighv2-5A0A0A6YY69 116 aa9.7□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 H2al1kJ3QP08 105 aa9.7□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 H2al1eQ810S6 105 aa9.7□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 H2al1mQ9DAD9 105 aa9.7□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 Chchd7Q8K2Q5 85 aa9.69□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 Wnk1P83741 2377 aa9.69□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 Ucn2Q99ML8 113 aa9.68□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 Trav13d-4A0A0G2JFX3 110 aa9.68□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 P01819 144 aa9.68□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 Hivep1Q03172 2688 aa9.67□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 Gm3443F7CCV5 94 aa9.67□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 Gm5153P01627 120 aa9.67□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 Defb42Q8BVB5 75 aa9.67□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 Nf1Q04690 2841 aa9.67□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 Igkv8-18A0A0B4J1J3 123 aa9.66□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 Prp2P05143 317 aa9.66□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 Bles03Q8VD62 251 aa9.66□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 4930535I16RikQ9CUI2 172 aa9.66□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 Trav13-1A0A075B644 110 aa9.66□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 Dph3Q8K0W9 82 aa9.66□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 Ighv1-49A0A0A6YWX2 117 aa9.65□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 Igkv4-72A0A0B4J1I4 117 aa9.65□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 Gm43218A0A0G2JGT0 114 aa9.65□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 E130114P18RikF6S0S7 154 aa9.65□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 Defb26Q30KN7 186 aa9.65□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 Odf3l2Q3TZ65 277 aa9.65□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 Fam229bQ8CF36 80 aa9.65□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 Q8R092 253 aa9.65□□□□□ -0.86
Hoxc4-201ENSMUST00000100164 Igkv8-26A0A075B5N5 123 aa9.64□□□□□ -0.87
Hoxc4-201ENSMUST00000100164 Trav9d-3A0A075B695 113 aa9.64□□□□□ -0.87
Hoxc4-201ENSMUST00000100164 Igkv8-27A0A0G2JF28 120 aa9.64□□□□□ -0.87
Hoxc4-201ENSMUST00000100164 Igkv8-30A0A140T8M3 121 aa9.64□□□□□ -0.87
Hoxc4-201ENSMUST00000100164 Sprr1bQ62267 153 aa9.64□□□□□ -0.87
Hoxc4-201ENSMUST00000100164 Spata3Q9D9T6 193 aa9.64□□□□□ -0.87
Hoxc4-201ENSMUST00000100164 Gm3250E9Q1M3 230 aa9.63□□□□□ -0.87
Hoxc4-201ENSMUST00000100164 BikO70337 150 aa9.63□□□□□ -0.87
Hoxc4-201ENSMUST00000100164 Nop10Q9CQS2 64 aa9.63□□□□□ -0.87
Hoxc4-201ENSMUST00000100164 SnurfQ9WU12 71 aa9.63□□□□□ -0.87
Hoxc4-201ENSMUST00000100164 Col6a5A6H584 2640 aa9.63□□□□□ -0.87
Hoxc4-201ENSMUST00000100164 Igkv2-109A0A075B5K6 120 aa9.63□□□□□ -0.87
Hoxc4-201ENSMUST00000100164 FcgbpE9Q0B5 2583 aa9.62□□□□□ -0.87
Hoxc4-201ENSMUST00000100164 CubnQ9JLB4 3623 aa9.62□□□□□ -0.87
Hoxc4-201ENSMUST00000100164 Srsf12Q8C8K3 266 aa9.62□□□□□ -0.87
Hoxc4-201ENSMUST00000100164 Gpha2Q925Q5 128 aa9.62□□□□□ -0.87
Hoxc4-201ENSMUST00000100164 BC067074F6RXI4 2391 aa9.61□□□□□ -0.87
Hoxc4-201ENSMUST00000100164 Igkv1-110A0A0B4J1I0 119 aa9.61□□□□□ -0.87
Hoxc4-201ENSMUST00000100164 Igkv4-53A0A0G2JFC6 119 aa9.61□□□□□ -0.87
Hoxc4-201ENSMUST00000100164 Pet100P0DJE0 76 aa9.61□□□□□ -0.87
Hoxc4-201ENSMUST00000100164 Pou2af1Q64693 256 aa9.61□□□□□ -0.87
Hoxc4-201ENSMUST00000100164 MplkipQ9D011 178 aa9.6□□□□□ -0.87
Hoxc4-201ENSMUST00000100164 Notch3Q61982 2318 aa9.6□□□□□ -0.87
Hoxc4-201ENSMUST00000100164 Lypd5Q9D7Z7 256 aa9.59□□□□□ -0.87
Hoxc4-201ENSMUST00000100164 Trav9n-4A0A075B631 113 aa9.59□□□□□ -0.87
Hoxc4-201ENSMUST00000100164 Ighv10-1A0A0B4J1J6 119 aa9.59□□□□□ -0.87
Hoxc4-201ENSMUST00000100164 Pde6gP09174 87 aa9.59□□□□□ -0.87
Hoxc4-201ENSMUST00000100164 Muc4Q8JZM8 3443 aa9.58□□□□□ -0.88
Hoxc4-201ENSMUST00000100164 Ighv2-2A0A075B5P8 116 aa9.58□□□□□ -0.88
Hoxc4-201ENSMUST00000100164 P01821 116 aa9.58□□□□□ -0.88
Hoxc4-201ENSMUST00000100164 Cox7a1P56392 80 aa9.58□□□□□ -0.88
Hoxc4-201ENSMUST00000100164 Psors1c2Q80ZC9 134 aa9.58□□□□□ -0.88
Hoxc4-201ENSMUST00000100164 Gm8439G3UWA7 96 aa9.57□□□□□ -0.88
Hoxc4-201ENSMUST00000100164 Defa20Q45VN2 95 aa9.57□□□□□ -0.88
Hoxc4-201ENSMUST00000100164 UqcrqQ9CQ69 82 aa9.57□□□□□ -0.88
Hoxc4-201ENSMUST00000100164 Klk12B2RVZ0 247 aa9.56□□□□□ -0.88
Hoxc4-201ENSMUST00000100164 Gm7075D3Z497 112 aa9.56□□□□□ -0.88
Hoxc4-201ENSMUST00000100164 Gm10320E9PW43 113 aa9.56□□□□□ -0.88
Hoxc4-201ENSMUST00000100164 Cox7bP56393 80 aa9.56□□□□□ -0.88
Hoxc4-201ENSMUST00000100164 Gm37389A0A0A6YW05 95 aa9.55□□□□□ -0.88
Hoxc4-201ENSMUST00000100164 Trbv13-2A0A140T8N6 113 aa9.55□□□□□ -0.88
Hoxc4-201ENSMUST00000100164 PrlhG3UWC3 86 aa9.55□□□□□ -0.88
Hoxc4-201ENSMUST00000100164 Gm3233E9Q2H5 230 aa9.55□□□□□ -0.88
Hoxc4-201ENSMUST00000100164 Fam19a3Q7TPG6 132 aa9.55□□□□□ -0.88
Hoxc4-201ENSMUST00000100164 A830005F24RikQ8BRT5 167 aa9.55□□□□□ -0.88
Hoxc4-201ENSMUST00000100164 4930556J24RikQ9D4U7 146 aa9.55□□□□□ -0.88
Hoxc4-201ENSMUST00000100164 Krtap10-10A0A1W2P7T6 217 aa9.54□□□□□ -0.88
Hoxc4-201ENSMUST00000100164 Defa27F2Z403 93 aa9.54□□□□□ -0.88
Hoxc4-201ENSMUST00000100164 Spink4O35679 86 aa9.54□□□□□ -0.88
Hoxc4-201ENSMUST00000100164 Vpreb2P13373 142 aa9.54□□□□□ -0.88
Hoxc4-201ENSMUST00000100164 Tcl1b5P56845 121 aa9.54□□□□□ -0.88
Hoxc4-201ENSMUST00000100164 A530084C06RikQ3UTW2 186 aa9.54□□□□□ -0.88
Hoxc4-201ENSMUST00000100164 Wfdc17Q5SSJ1 76 aa9.54□□□□□ -0.88
Hoxc4-201ENSMUST00000100164 Tomm7Q9D173 55 aa9.54□□□□□ -0.88
Hoxc4-201ENSMUST00000100164 C530025M09RikF6RGA8 229 aa9.53□□□□□ -0.88
Hoxc4-201ENSMUST00000100164 Rbm3O89086 153 aaKnown RBP9.53□□□□□ -0.88
Hoxc4-201ENSMUST00000100164 9530003J23RikQ8BM26 151 aa9.51□□□□□ -0.89
Hoxc4-201ENSMUST00000100164 Stab1Q8R4Y4 2571 aa9.51□□□□□ -0.89
Hoxc4-201ENSMUST00000100164 Trav13-2A0A075B649 110 aa9.5□□□□□ -0.89
Hoxc4-201ENSMUST00000100164 Gm17689B3GLJ4 109 aa9.5□□□□□ -0.89
Hoxc4-201ENSMUST00000100164 Igkv8-34A0A0G2JDU0 121 aa9.49□□□□□ -0.89
Hoxc4-201ENSMUST00000100164 Igkv4-58A0A0G2JGI6 119 aa9.49□□□□□ -0.89
Hoxc4-201ENSMUST00000100164 Gm9805F6YK59 57 aa9.49□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 89.4 ms