RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Gm10735Q3US96 136 aa5.87□□□□□ -1.47
Trim39-201ENSMUST00000042717 Pfn2Q9JJV2 140 aa5.87□□□□□ -1.47
Trim39-201ENSMUST00000042717 Atp5eP56382 52 aa5.87□□□□□ -1.47
Trim39-201ENSMUST00000042717 Zfand2aQ9JII7 171 aa5.87□□□□□ -1.47
Trim39-201ENSMUST00000042717 Defb45Q3V490 66 aa5.86□□□□□ -1.47
Trim39-201ENSMUST00000042717 Psors1c2Q80ZC9 134 aa5.86□□□□□ -1.47
Trim39-201ENSMUST00000042717 1700020N15RikL7MTX3 112 aa5.85□□□□□ -1.47
Trim39-201ENSMUST00000042717 NrepQ07475 68 aa5.85□□□□□ -1.47
Trim39-201ENSMUST00000042717 Morn5Q9DAI9 170 aa5.85□□□□□ -1.47
Trim39-201ENSMUST00000042717 Tmem86bQ497J1 226 aa5.85□□□□□ -1.47
Trim39-201ENSMUST00000042717 Gm16485Q8C4B7 115 aa5.85□□□□□ -1.47
Trim39-201ENSMUST00000042717 Rab37Q9JKM7 223 aa5.85□□□□□ -1.47
Trim39-201ENSMUST00000042717 Dnah17Q69Z23 4481 aa5.85□□□□□ -1.47
Trim39-201ENSMUST00000042717 Defa3P28310 93 aa5.84□□□□□ -1.47
Trim39-201ENSMUST00000042717 Defa10P50708 93 aa5.84□□□□□ -1.47
Trim39-201ENSMUST00000042717 Ighv2-9-1A0A075B697 116 aa5.84□□□□□ -1.47
Trim39-201ENSMUST00000042717 Ighv1-61P01749 117 aa5.84□□□□□ -1.47
Trim39-201ENSMUST00000042717 4930415O20RikQ8CDT5 131 aa5.84□□□□□ -1.47
Trim39-201ENSMUST00000042717 Gm37389A0A0A6YW05 95 aa5.83□□□□□ -1.48
Trim39-201ENSMUST00000042717 Rpl13aP19253 203 aaKnown RBP5.83□□□□□ -1.48
Trim39-201ENSMUST00000042717 Tac4Q99N14 128 aa5.83□□□□□ -1.48
Trim39-201ENSMUST00000042717 Gemin7Q9CWY4 129 aa5.83□□□□□ -1.48
Trim39-201ENSMUST00000042717 4930442H23RikQ9D5G7 103 aa5.83□□□□□ -1.48
Trim39-201ENSMUST00000042717 Trav13-2A0A075B649 110 aa5.83□□□□□ -1.48
Trim39-201ENSMUST00000042717 A0A286YCN5 57 aa5.83□□□□□ -1.48
Trim39-201ENSMUST00000042717 1700011M02RikB1AX35 88 aa5.83□□□□□ -1.48
Trim39-201ENSMUST00000042717 Defa20Q45VN2 95 aa5.83□□□□□ -1.48
Trim39-201ENSMUST00000042717 Sprr1bQ62267 153 aa5.83□□□□□ -1.48
Trim39-201ENSMUST00000042717 Defb50Q6TU36 73 aa5.83□□□□□ -1.48
Trim39-201ENSMUST00000042717 Gm11213A0A1B0GR83 88 aa5.82□□□□□ -1.48
Trim39-201ENSMUST00000042717 Glrp1E9Q9S8 174 aa5.82□□□□□ -1.48
Trim39-201ENSMUST00000042717 Sox16Q62247 57 aa5.82□□□□□ -1.48
Trim39-201ENSMUST00000042717 Wfdc12Q9JHY3 85 aa5.82□□□□□ -1.48
Trim39-201ENSMUST00000042717 Samd13D3YUG0 102 aa5.81□□□□□ -1.48
Trim39-201ENSMUST00000042717 Defa16P50714 93 aa5.81□□□□□ -1.48
Trim39-201ENSMUST00000042717 Trav4-3A0A0B4J1K1 110 aa5.81□□□□□ -1.48
Trim39-201ENSMUST00000042717 Igkv8-16A0A0G2JDG9 121 aa5.81□□□□□ -1.48
Trim39-201ENSMUST00000042717 PkigO70139 76 aa5.81□□□□□ -1.48
Trim39-201ENSMUST00000042717 Defa1P11477 93 aa5.81□□□□□ -1.48
Trim39-201ENSMUST00000042717 Sostdc1Q9CQN4 206 aa5.8□□□□□ -1.48
Trim39-201ENSMUST00000042717 Ighv1-56A0A0A6YXG2 117 aa5.8□□□□□ -1.48
Trim39-201ENSMUST00000042717 MifP34884 115 aaKnown RBP5.8□□□□□ -1.48
Trim39-201ENSMUST00000042717 Ube2wQ8VDW4 151 aa5.8□□□□□ -1.48
Trim39-201ENSMUST00000042717 2310061N02RikQ9D6S9 174 aa5.8□□□□□ -1.48
Trim39-201ENSMUST00000042717 1700010B08RikQ9DAI7 102 aa5.8□□□□□ -1.48
Trim39-201ENSMUST00000042717 Ighv2-9A0A075B5Q5 116 aa5.8□□□□□ -1.48
Trim39-201ENSMUST00000042717 Lgals4Q8K419 326 aa5.8□□□□□ -1.48
Trim39-201ENSMUST00000042717 Ly6g6cQ9Z1Q4 126 aa5.8□□□□□ -1.48
Trim39-201ENSMUST00000042717 AW011738F6S7Q2 159 aa5.79□□□□□ -1.48
Trim39-201ENSMUST00000042717 PrkdcP97313 4128 aa5.79□□□□□ -1.48
Trim39-201ENSMUST00000042717 A730009L09RikA0A1B0GS82 72 aa5.78□□□□□ -1.48
Trim39-201ENSMUST00000042717 C530025M09RikF6RGA8 229 aa5.78□□□□□ -1.48
Trim39-201ENSMUST00000042717 Lyrm7Q9DA03 104 aa5.78□□□□□ -1.48
Trim39-201ENSMUST00000042717 Igkv4-92A0A0B4J1I2 117 aa5.78□□□□□ -1.48
Trim39-201ENSMUST00000042717 Cox7b2Q9D2H1 82 aa5.78□□□□□ -1.48
Trim39-201ENSMUST00000042717 Ndufa12Q7TMF3 145 aaKnown RBP5.78□□□□□ -1.48
Trim39-201ENSMUST00000042717 Trav3-4A0A075B654 114 aa5.77□□□□□ -1.49
Trim39-201ENSMUST00000042717 Gm10518F6UQQ9 182 aa5.77□□□□□ -1.49
Trim39-201ENSMUST00000042717 4930556J24RikQ9D4U7 146 aa5.77□□□□□ -1.49
Trim39-201ENSMUST00000042717 Gm10337F7DEP7 55 aa5.77□□□□□ -1.49
Trim39-201ENSMUST00000042717 Dnah1E9Q8T7 4250 aa5.77□□□□□ -1.49
Trim39-201ENSMUST00000042717 Lst1O08843 95 aa5.76□□□□□ -1.49
Trim39-201ENSMUST00000042717 Camk2n2Q78WH7 79 aa5.76□□□□□ -1.49
Trim39-201ENSMUST00000042717 Reg3dQ9QUS9 175 aa5.76□□□□□ -1.49
Trim39-201ENSMUST00000042717 Timm17bQ9Z0V7 172 aa5.76□□□□□ -1.49
Trim39-201ENSMUST00000042717 Trav4d-3A0A075B625 110 aa5.76□□□□□ -1.49
Trim39-201ENSMUST00000042717 Defb47Q30KN1 79 aa5.76□□□□□ -1.49
Trim39-201ENSMUST00000042717 Gm17509Q9CZ61 145 aa5.76□□□□□ -1.49
Trim39-201ENSMUST00000042717 Ly6hQ9WUC3 139 aa5.76□□□□□ -1.49
Trim39-201ENSMUST00000042717 Ufsp1Q9CZP0 217 aa5.75□□□□□ -1.49
Trim39-201ENSMUST00000042717 Gm9918Q8BUR5 174 aa5.75□□□□□ -1.49
Trim39-201ENSMUST00000042717 Igkv3-2A0A075B5P0 119 aa5.74□□□□□ -1.49
Trim39-201ENSMUST00000042717 Gm6793B2RXM2 351 aa5.74□□□□□ -1.49
Trim39-201ENSMUST00000042717 Eif4ebp3Q80VV3 101 aa5.74□□□□□ -1.49
Trim39-201ENSMUST00000042717 Nupr2Q497P3 102 aa5.74□□□□□ -1.49
Trim39-201ENSMUST00000042717 Fras1Q80T14 4010 aa5.74□□□□□ -1.49
Trim39-201ENSMUST00000042717 Defa4P28311 92 aa5.73□□□□□ -1.49
Trim39-201ENSMUST00000042717 Pglyrp4Q0VB07 374 aa5.73□□□□□ -1.49
Trim39-201ENSMUST00000042717 Cops9Q3U898 57 aa5.73□□□□□ -1.49
Trim39-201ENSMUST00000042717 SelenowP63300 88 aa5.73□□□□□ -1.49
Trim39-201ENSMUST00000042717 H2al1aQ5M8Q2 105 aa5.73□□□□□ -1.49
Trim39-201ENSMUST00000042717 Gm29423A0A087WRM1 55 aa5.73□□□□□ -1.49
Trim39-201ENSMUST00000042717 Gm10197F6QEY5 67 aa5.73□□□□□ -1.49
Trim39-201ENSMUST00000042717 Gm10577Q3UDV9 132 aa5.72□□□□□ -1.49
Trim39-201ENSMUST00000042717 Mrpl55Q9CZ83 127 aa5.72□□□□□ -1.49
Trim39-201ENSMUST00000042717 Phpt1Q9DAK9 124 aa5.72□□□□□ -1.49
Trim39-201ENSMUST00000042717 2310009B15RikA0A0A6YWI4 143 aa5.72□□□□□ -1.49
Trim39-201ENSMUST00000042717 9430015G10RikA2ASP7 199 aa5.72□□□□□ -1.49
Trim39-201ENSMUST00000042717 U90926O08546 118 aa5.72□□□□□ -1.49
Trim39-201ENSMUST00000042717 Hbb-b2P02089 147 aa5.72□□□□□ -1.49
Trim39-201ENSMUST00000042717 Sprr4Q8CGN8 76 aa5.72□□□□□ -1.49
Trim39-201ENSMUST00000042717 2310050C09RikG5E8Z3 280 aa5.71□□□□□ -1.49
Trim39-201ENSMUST00000042717 Rpl32-psP17932 135 aa5.71□□□□□ -1.49
Trim39-201ENSMUST00000042717 PscaP57096 123 aa5.71□□□□□ -1.49
Trim39-201ENSMUST00000042717 Defb29Q8BGW9 78 aa5.71□□□□□ -1.49
Trim39-201ENSMUST00000042717 Dync2h1Q45VK7 4306 aa5.71□□□□□ -1.5
Trim39-201ENSMUST00000042717 Igkv1-117A0A140T8M0 119 aa5.71□□□□□ -1.5
Trim39-201ENSMUST00000042717 Igkv1-88A0A140T8N1 120 aa5.71□□□□□ -1.5
Trim39-201ENSMUST00000042717 Lage3Q9CR70 148 aa5.71□□□□□ -1.5
Trim39-201ENSMUST00000042717 Wdr38Q9D994 303 aa5.71□□□□□ -1.5
Retrieved 100 of 22,080 RNA–protein pairs in 61.3 ms