RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

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Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Gm9573F7C950 1606 aa6.97□□□□□ -1.29
Syne1-201ENSMUST00000041639 BC025920Q3US60 128 aa6.97□□□□□ -1.29
Syne1-201ENSMUST00000041639 Gm16485Q8C4B7 115 aa6.97□□□□□ -1.29
Syne1-201ENSMUST00000041639 Adm2Q7TNK8 150 aa6.96□□□□□ -1.29
Syne1-201ENSMUST00000041639 1600014C23RikQ9DAX4 101 aa6.96□□□□□ -1.29
Syne1-201ENSMUST00000041639 Igkv8-28A0A0G2JE47 121 aa6.96□□□□□ -1.3
Syne1-201ENSMUST00000041639 Apoc4Q61268 124 aa6.96□□□□□ -1.3
Syne1-201ENSMUST00000041639 Gm3285A0A1W2P7U0 201 aa6.96□□□□□ -1.3
Syne1-201ENSMUST00000041639 H2al1kJ3QP08 105 aa6.96□□□□□ -1.3
Syne1-201ENSMUST00000041639 Cdip1Q9DB75 208 aa6.96□□□□□ -1.3
Syne1-201ENSMUST00000041639 Odf3l2Q3TZ65 277 aa6.95□□□□□ -1.3
Syne1-201ENSMUST00000041639 Ighv8-13A0A075B5Y0 101 aa6.95□□□□□ -1.3
Syne1-201ENSMUST00000041639 Zfand2aQ9JII7 171 aa6.95□□□□□ -1.3
Syne1-201ENSMUST00000041639 Ly6g6cQ9Z1Q4 126 aa6.94□□□□□ -1.3
Syne1-201ENSMUST00000041639 Wfdc17Q5SSJ1 76 aa6.94□□□□□ -1.3
Syne1-201ENSMUST00000041639 Col27a1Q5QNQ9 1845 aa6.93□□□□□ -1.3
Syne1-201ENSMUST00000041639 Crip3Q6Q6R3 243 aa6.93□□□□□ -1.3
Syne1-201ENSMUST00000041639 Gm42715A0A087WP63 3095 aaKnown RBP6.93□□□□□ -1.3
Syne1-201ENSMUST00000041639 Epg5Q80TA9 2572 aa6.93□□□□□ -1.3
Syne1-201ENSMUST00000041639 3110070M22RikQ9DAQ7 118 aa6.93□□□□□ -1.3
Syne1-201ENSMUST00000041639 Znf580Q9DB38 172 aa6.92□□□□□ -1.3
Syne1-201ENSMUST00000041639 Cd164Q9R0L9 197 aa6.92□□□□□ -1.3
Syne1-201ENSMUST00000041639 UqcrqQ9CQ69 82 aa6.92□□□□□ -1.3
Syne1-201ENSMUST00000041639 4930519P11RikQ9CUJ8 166 aa6.92□□□□□ -1.3
Syne1-201ENSMUST00000041639 Usp9yF8VPU6 2556 aa6.91□□□□□ -1.3
Syne1-201ENSMUST00000041639 Defb37Q7TMD2 62 aa6.91□□□□□ -1.3
Syne1-201ENSMUST00000041639 Q9DAA7 145 aa6.91□□□□□ -1.3
Syne1-201ENSMUST00000041639 Smr3aQ61900 147 aa6.91□□□□□ -1.3
Syne1-201ENSMUST00000041639 Ep400Q8CHI8 3072 aaKnown RBP6.9□□□□□ -1.3
Syne1-201ENSMUST00000041639 Myo18bE9PV66 2605 aa6.9□□□□□ -1.31
Syne1-201ENSMUST00000041639 Gm28230A0A0A0MQ91 144 aa6.9□□□□□ -1.31
Syne1-201ENSMUST00000041639 Gm10570F6VB42 170 aa6.89□□□□□ -1.31
Syne1-201ENSMUST00000041639 Reg3aO09037 175 aa6.89□□□□□ -1.31
Syne1-201ENSMUST00000041639 Defb39Q70KL3 74 aa6.89□□□□□ -1.31
Syne1-201ENSMUST00000041639 Ighv1-56A0A0A6YXG2 117 aa6.89□□□□□ -1.31
Syne1-201ENSMUST00000041639 Abca12E9Q876 2595 aa6.88□□□□□ -1.31
Syne1-201ENSMUST00000041639 Defb10Q8R2I8 73 aa6.88□□□□□ -1.31
Syne1-201ENSMUST00000041639 Ntn5Q3UQ22 452 aa6.87□□□□□ -1.31
Syne1-201ENSMUST00000041639 A730009L09RikA0A1B0GS82 72 aa6.86□□□□□ -1.31
Syne1-201ENSMUST00000041639 Defb45Q3V490 66 aa6.86□□□□□ -1.31
Syne1-201ENSMUST00000041639 Coa6Q8BGD8 79 aa6.86□□□□□ -1.31
Syne1-201ENSMUST00000041639 Bean1Q9EQG5 255 aa6.86□□□□□ -1.31
Syne1-201ENSMUST00000041639 Unc79Q0KK59 2596 aa6.85□□□□□ -1.31
Syne1-201ENSMUST00000041639 4930518I15RikQ3V2W7 57 aa6.85□□□□□ -1.31
Syne1-201ENSMUST00000041639 Cox6a2P43023 97 aa6.85□□□□□ -1.31
Syne1-201ENSMUST00000041639 Mrpl34Q99N91 92 aa6.85□□□□□ -1.31
Syne1-201ENSMUST00000041639 Nbeal1E9PYP2 2688 aa6.84□□□□□ -1.31
Syne1-201ENSMUST00000041639 Sostdc1Q9CQN4 206 aa6.84□□□□□ -1.31
Syne1-201ENSMUST00000041639 PcntP48725 2898 aa6.83□□□□□ -1.32
Syne1-201ENSMUST00000041639 6430550D23RikE9Q1X6 194 aa6.83□□□□□ -1.32
Syne1-201ENSMUST00000041639 Col5a1O88207 1838 aa6.83□□□□□ -1.32
Syne1-201ENSMUST00000041639 Gm10197F6QEY5 67 aa6.83□□□□□ -1.32
Syne1-201ENSMUST00000041639 Igkv8-19A0A0G2JFN8 121 aa6.83□□□□□ -1.32
Syne1-201ENSMUST00000041639 CrygaP04345 174 aa6.83□□□□□ -1.32
Syne1-201ENSMUST00000041639 Fam19a3Q7TPG6 132 aa6.82□□□□□ -1.32
Syne1-201ENSMUST00000041639 Msrb1Q9JLC3 116 aa6.82□□□□□ -1.32
Syne1-201ENSMUST00000041639 1700018G05RikA0A1B0GSI2 66 aa6.82□□□□□ -1.32
Syne1-201ENSMUST00000041639 Spint4Q9D263 159 aa6.82□□□□□ -1.32
Syne1-201ENSMUST00000041639 Cep192E9Q4Y4 2514 aaKnown RBP6.82□□□□□ -1.32
Syne1-201ENSMUST00000041639 Gm43218A0A0G2JGT0 114 aa6.81□□□□□ -1.32
Syne1-201ENSMUST00000041639 Srsf12Q8C8K3 266 aa6.81□□□□□ -1.32
Syne1-201ENSMUST00000041639 MobpQ9D2P8 170 aa6.8□□□□□ -1.32
Syne1-201ENSMUST00000041639 Csdc2Q91YQ3 154 aa6.8□□□□□ -1.32
Syne1-201ENSMUST00000041639 AI854703Q8BIN3 203 aa6.8□□□□□ -1.32
Syne1-201ENSMUST00000041639 CicQ924A2 2510 aa6.8□□□□□ -1.32
Syne1-201ENSMUST00000041639 Gm28374F6SG70 93 aa6.8□□□□□ -1.32
Syne1-201ENSMUST00000041639 Gm21886J3QJU9 214 aa6.79□□□□□ -1.32
Syne1-201ENSMUST00000041639 Igkv8-27A0A0G2JF28 120 aa6.79□□□□□ -1.32
Syne1-201ENSMUST00000041639 Jbts17Q8CE72 3214 aa6.78□□□□□ -1.32
Syne1-201ENSMUST00000041639 Col4a2P08122 1707 aa6.78□□□□□ -1.32
Syne1-201ENSMUST00000041639 Gm10160F6Y577 67 aa6.78□□□□□ -1.32
Syne1-201ENSMUST00000041639 Gm10642Q3TWM1 71 aa6.78□□□□□ -1.32
Syne1-201ENSMUST00000041639 Ighv2-5A0A0A6YY69 116 aa6.77□□□□□ -1.33
Syne1-201ENSMUST00000041639 P01819 144 aa6.77□□□□□ -1.33
Syne1-201ENSMUST00000041639 Gm44790A0A0N4SV91 103 aa6.77□□□□□ -1.33
Syne1-201ENSMUST00000041639 Chchd10Q7TNL9 138 aa6.76□□□□□ -1.33
Syne1-201ENSMUST00000041639 Dnah12Q3V0Q1 3086 aa6.75□□□□□ -1.33
Syne1-201ENSMUST00000041639 Gm16181B0V2H2 73 aa6.75□□□□□ -1.33
Syne1-201ENSMUST00000041639 A530084C06RikQ3UTW2 186 aa6.75□□□□□ -1.33
Syne1-201ENSMUST00000041639 Dmac1Q9CQ00 111 aa6.74□□□□□ -1.33
Syne1-201ENSMUST00000041639 Gm3250E9Q1M3 230 aa6.74□□□□□ -1.33
Syne1-201ENSMUST00000041639 2310034G01RikA0A286YDL3 209 aa6.74□□□□□ -1.33
Syne1-201ENSMUST00000041639 Usp24B1AY13 2617 aaKnown RBP6.74□□□□□ -1.33
Syne1-201ENSMUST00000041639 Gm11627A6PWP4 55 aa6.74□□□□□ -1.33
Syne1-201ENSMUST00000041639 Cep350E9Q309 3095 aa6.74□□□□□ -1.33
Syne1-201ENSMUST00000041639 Elof1P60003 83 aa6.73□□□□□ -1.33
Syne1-201ENSMUST00000041639 Krtap16-1A2A5X5 502 aa6.73□□□□□ -1.33
Syne1-201ENSMUST00000041639 E130208F15RikQ3UPV3 143 aa6.73□□□□□ -1.33
Syne1-201ENSMUST00000041639 Defb50Q6TU36 73 aa6.73□□□□□ -1.33
Syne1-201ENSMUST00000041639 Zfp292Q9Z2U2 2698 aa6.72□□□□□ -1.33
Syne1-201ENSMUST00000041639 Ankrd11E9Q4F7 2643 aa6.72□□□□□ -1.33
Syne1-201ENSMUST00000041639 Ighv2-2A0A075B5P8 116 aa6.72□□□□□ -1.33
Syne1-201ENSMUST00000041639 Gm10770F7D043 238 aa6.72□□□□□ -1.33
Syne1-201ENSMUST00000041639 P01821 116 aa6.72□□□□□ -1.33
Syne1-201ENSMUST00000041639 Gm10999F6Q4M4 69 aa6.71□□□□□ -1.34
Syne1-201ENSMUST00000041639 Snhg11Q4G0K9 87 aa6.71□□□□□ -1.34
Syne1-201ENSMUST00000041639 AI606181Q8C7B9 129 aa6.71□□□□□ -1.34
Syne1-201ENSMUST00000041639 Gm17606F6ZL36 78 aa6.7□□□□□ -1.34
Syne1-201ENSMUST00000041639 Krtap24-1G3X9A2 248 aa6.7□□□□□ -1.34
Syne1-201ENSMUST00000041639 Phf5aP83870 110 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 62.2 ms