RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Nav3Q80TN7 2359 aa7.12□□□□□ -1.27
Ubr1-201ENSMUST00000028728 Igkv8-27A0A0G2JF28 120 aa7.12□□□□□ -1.27
Ubr1-201ENSMUST00000028728 Igkv8-30A0A140T8M3 121 aa7.12□□□□□ -1.27
Ubr1-201ENSMUST00000028728 6430550D23RikE9Q1X6 194 aa7.12□□□□□ -1.27
Ubr1-201ENSMUST00000028728 Psors1c2Q80ZC9 134 aa7.12□□□□□ -1.27
Ubr1-201ENSMUST00000028728 Limd2Q8BGB5 128 aa7.12□□□□□ -1.27
Ubr1-201ENSMUST00000028728 Abca2P41234 2434 aa7.12□□□□□ -1.27
Ubr1-201ENSMUST00000028728 Cox6a2P43023 97 aa7.12□□□□□ -1.27
Ubr1-201ENSMUST00000028728 Fam19a3Q7TPG6 132 aa7.12□□□□□ -1.27
Ubr1-201ENSMUST00000028728 2310034G01RikA0A286YDL3 209 aa7.11□□□□□ -1.27
Ubr1-201ENSMUST00000028728 Krtap26-1Q9D7N2 215 aa7.11□□□□□ -1.27
Ubr1-201ENSMUST00000028728 Hcfc1Q61191 2045 aaKnown RBP7.11□□□□□ -1.27
Ubr1-201ENSMUST00000028728 Wfdc13Q5DQQ6 81 aa7.11□□□□□ -1.27
Ubr1-201ENSMUST00000028728 Chchd10Q7TNL9 138 aa7.11□□□□□ -1.27
Ubr1-201ENSMUST00000028728 NrgnP60761 78 aa7.1□□□□□ -1.27
Ubr1-201ENSMUST00000028728 Cdc42se1Q8BHL7 80 aa7.1□□□□□ -1.27
Ubr1-201ENSMUST00000028728 Lce6aD3YV94 81 aa7.1□□□□□ -1.27
Ubr1-201ENSMUST00000028728 Mrpl34Q99N91 92 aa7.1□□□□□ -1.27
Ubr1-201ENSMUST00000028728 FshbQ60687 130 aa7.09□□□□□ -1.27
Ubr1-201ENSMUST00000028728 Rif1Q6PR54 2419 aaKnown RBP7.09□□□□□ -1.28
Ubr1-201ENSMUST00000028728 Gm10160F6Y577 67 aa7.09□□□□□ -1.28
Ubr1-201ENSMUST00000028728 Msrb1Q9JLC3 116 aa7.08□□□□□ -1.28
Ubr1-201ENSMUST00000028728 D730001G18RikA0A087WQU7 115 aa7.07□□□□□ -1.28
Ubr1-201ENSMUST00000028728 Gm28230A0A0A0MQ91 144 aa7.07□□□□□ -1.28
Ubr1-201ENSMUST00000028728 Gm26661M0QWV4 156 aa7.07□□□□□ -1.28
Ubr1-201ENSMUST00000028728 Elof1P60003 83 aa7.07□□□□□ -1.28
Ubr1-201ENSMUST00000028728 Col4a4Q9QZR9 1682 aa7.07□□□□□ -1.28
Ubr1-201ENSMUST00000028728 Igkv3-12A0A140T8P0 119 aa7.06□□□□□ -1.28
Ubr1-201ENSMUST00000028728 Gm10643Q3URG9 111 aa7.06□□□□□ -1.28
Ubr1-201ENSMUST00000028728 U90926O08546 118 aa7.05□□□□□ -1.28
Ubr1-201ENSMUST00000028728 Defb38Q7TNV7 63 aa7.04□□□□□ -1.28
Ubr1-201ENSMUST00000028728 4930519P11RikQ9CUJ8 166 aa7.04□□□□□ -1.28
Ubr1-201ENSMUST00000028728 Reg3aO09037 175 aa7.04□□□□□ -1.28
Ubr1-201ENSMUST00000028728 Bean1Q9EQG5 255 aa7.04□□□□□ -1.28
Ubr1-201ENSMUST00000028728 AI606181Q8C7B9 129 aa7.03□□□□□ -1.28
Ubr1-201ENSMUST00000028728 Col4a2P08122 1707 aa7.03□□□□□ -1.28
Ubr1-201ENSMUST00000028728 Gm9767G3X930 207 aa7.03□□□□□ -1.28
Ubr1-201ENSMUST00000028728 Nupr2Q497P3 102 aa7.03□□□□□ -1.28
Ubr1-201ENSMUST00000028728 Usp9xP70398 2559 aaKnown RBP7.02□□□□□ -1.29
Ubr1-201ENSMUST00000028728 PscaP57096 123 aa7.01□□□□□ -1.29
Ubr1-201ENSMUST00000028728 Hivep2Q3UHF7 2430 aa7.01□□□□□ -1.29
Ubr1-201ENSMUST00000028728 Gm21886J3QJU9 214 aa7.01□□□□□ -1.29
Ubr1-201ENSMUST00000028728 Lrrk2Q5S006 2527 aa7□□□□□ -1.29
Ubr1-201ENSMUST00000028728 Gm11627A6PWP4 55 aa7□□□□□ -1.29
Ubr1-201ENSMUST00000028728 Ttc28Q80XJ3 2450 aa7□□□□□ -1.29
Ubr1-201ENSMUST00000028728 PolqQ8CGS6 2544 aa6.99□□□□□ -1.29
Ubr1-201ENSMUST00000028728 Dmac1Q9CQ00 111 aa6.99□□□□□ -1.29
Ubr1-201ENSMUST00000028728 Srsf12Q8C8K3 266 aa6.99□□□□□ -1.29
Ubr1-201ENSMUST00000028728 Defb37Q7TMD2 62 aa6.98□□□□□ -1.29
Ubr1-201ENSMUST00000028728 Gm16485Q8C4B7 115 aa6.98□□□□□ -1.29
Ubr1-201ENSMUST00000028728 Phxr4P15974 95 aa6.97□□□□□ -1.29
Ubr1-201ENSMUST00000028728 Igkv8-19A0A0G2JFN8 121 aa6.97□□□□□ -1.29
Ubr1-201ENSMUST00000028728 Coa5Q99M07 74 aa6.97□□□□□ -1.29
Ubr1-201ENSMUST00000028728 A730009L09RikA0A1B0GS82 72 aa6.96□□□□□ -1.29
Ubr1-201ENSMUST00000028728 Piezo1E2JF22 2547 aa6.96□□□□□ -1.3
Ubr1-201ENSMUST00000028728 Gm10770F7D043 238 aa6.96□□□□□ -1.3
Ubr1-201ENSMUST00000028728 Gm44790A0A0N4SV91 103 aa6.96□□□□□ -1.3
Ubr1-201ENSMUST00000028728 Eif4ebp3Q80VV3 101 aa6.96□□□□□ -1.3
Ubr1-201ENSMUST00000028728 Gm17689B3GLJ4 109 aa6.95□□□□□ -1.3
Ubr1-201ENSMUST00000028728 Wfdc6bF6ULY1 148 aa6.95□□□□□ -1.3
Ubr1-201ENSMUST00000028728 Zfp462B1AWL2 2495 aaKnown RBP6.94□□□□□ -1.3
Ubr1-201ENSMUST00000028728 1700018G05RikA0A1B0GSI2 66 aa6.94□□□□□ -1.3
Ubr1-201ENSMUST00000028728 1810062G17RikG3X8Y2 129 aa6.94□□□□□ -1.3
Ubr1-201ENSMUST00000028728 Igkv8-28A0A0G2JE47 121 aa6.94□□□□□ -1.3
Ubr1-201ENSMUST00000028728 Gm4707V9GXN5 68 aa6.94□□□□□ -1.3
Ubr1-201ENSMUST00000028728 Pkd1l2Q7TN88 2461 aa6.94□□□□□ -1.3
Ubr1-201ENSMUST00000028728 Gm10772F7AIG4 85 aa6.93□□□□□ -1.3
Ubr1-201ENSMUST00000028728 Gm28374F6SG70 93 aa6.93□□□□□ -1.3
Ubr1-201ENSMUST00000028728 Igkv3-7A0A0G2JE31 119 aa6.92□□□□□ -1.3
Ubr1-201ENSMUST00000028728 PtprqP0C5E4 2300 aa6.91□□□□□ -1.3
Ubr1-201ENSMUST00000028728 Gm20661K7N787 53 aa6.91□□□□□ -1.3
Ubr1-201ENSMUST00000028728 Defb50Q6TU36 73 aa6.91□□□□□ -1.3
Ubr1-201ENSMUST00000028728 Gm10837Q3UTT8 145 aa6.9□□□□□ -1.3
Ubr1-201ENSMUST00000028728 Prol1E9PYQ4 312 aa6.9□□□□□ -1.31
Ubr1-201ENSMUST00000028728 Sprr1bQ62267 153 aa6.89□□□□□ -1.31
Ubr1-201ENSMUST00000028728 Sptbn4E9PX29 2561 aa6.89□□□□□ -1.31
Ubr1-201ENSMUST00000028728 E130208F15RikQ3UPV3 143 aa6.89□□□□□ -1.31
Ubr1-201ENSMUST00000028728 Gm16181B0V2H2 73 aa6.87□□□□□ -1.31
Ubr1-201ENSMUST00000028728 Gm11213A0A1B0GR83 88 aa6.87□□□□□ -1.31
Ubr1-201ENSMUST00000028728 Wfdc17Q5SSJ1 76 aa6.86□□□□□ -1.31
Ubr1-201ENSMUST00000028728 AY074887Q8R5F9 132 aa6.86□□□□□ -1.31
Ubr1-201ENSMUST00000028728 Uqcr11Q9CPX8 56 aa6.86□□□□□ -1.31
Ubr1-201ENSMUST00000028728 Adm2Q7TNK8 150 aa6.85□□□□□ -1.31
Ubr1-201ENSMUST00000028728 Ptpn13Q64512 2453 aa6.85□□□□□ -1.31
Ubr1-201ENSMUST00000028728 Defb2P82020 71 aa6.84□□□□□ -1.31
Ubr1-201ENSMUST00000028728 Gm7276Q3TYW4 209 aa6.84□□□□□ -1.31
Ubr1-201ENSMUST00000028728 Gm5617Q91VN2 117 aa6.84□□□□□ -1.32
Ubr1-201ENSMUST00000028728 Gm12216A0A1W2P827 62 aa6.83□□□□□ -1.32
Ubr1-201ENSMUST00000028728 SetxA2AKX3 2646 aa6.83□□□□□ -1.32
Ubr1-201ENSMUST00000028728 Notch2O35516 2470 aa6.83□□□□□ -1.32
Ubr1-201ENSMUST00000028728 CnbpP53996 178 aaKnown RBP6.82□□□□□ -1.32
Ubr1-201ENSMUST00000028728 Wfdc3Q14AE4 130 aa6.82□□□□□ -1.32
Ubr1-201ENSMUST00000028728 A930002H24RikQ8C8Y3 163 aa6.81□□□□□ -1.32
Ubr1-201ENSMUST00000028728 Setd2E9Q5F9 2537 aa6.81□□□□□ -1.32
Ubr1-201ENSMUST00000028728 4930507D05RikQ8C9C9 103 aa6.8□□□□□ -1.32
Ubr1-201ENSMUST00000028728 Q8BT88 171 aa6.8□□□□□ -1.32
Ubr1-201ENSMUST00000028728 Snhg11Q4G0K9 87 aa6.79□□□□□ -1.32
Ubr1-201ENSMUST00000028728 Sprr4Q8CGN8 76 aa6.78□□□□□ -1.32
Ubr1-201ENSMUST00000028728 Cep192E9Q4Y4 2514 aaKnown RBP6.77□□□□□ -1.33
Ubr1-201ENSMUST00000028728 Gm10999F6Q4M4 69 aa6.77□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 54.3 ms