RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Spink8Q09TK9 105 aa11.14□□□□□ -0.63
Upf1-202ENSMUST00000215817 Triap1Q9D8Z2 76 aa11.13□□□□□ -0.63
Upf1-202ENSMUST00000215817 Itpr2Q9Z329 2701 aa11.13□□□□□ -0.63
Upf1-202ENSMUST00000215817 Igkv8-16A0A0G2JDG9 121 aa11.13□□□□□ -0.63
Upf1-202ENSMUST00000215817 Pla2g1bQ9Z0Y2 146 aa11.13□□□□□ -0.63
Upf1-202ENSMUST00000215817 BC048562Q80ZQ7 204 aa11.13□□□□□ -0.63
Upf1-202ENSMUST00000215817 BikO70337 150 aa11.12□□□□□ -0.63
Upf1-202ENSMUST00000215817 Naa38Q9D2U5 125 aa11.12□□□□□ -0.63
Upf1-202ENSMUST00000215817 Morn5Q9DAI9 170 aa11.12□□□□□ -0.63
Upf1-202ENSMUST00000215817 Trav11A0A0B4J1J9 114 aa11.12□□□□□ -0.63
Upf1-202ENSMUST00000215817 Mpv17l2Q8VIK2 200 aa11.12□□□□□ -0.63
Upf1-202ENSMUST00000215817 Ighv3-3A0A0A6YWL2 116 aa11.12□□□□□ -0.63
Upf1-202ENSMUST00000215817 Sfta2E9PXB6 77 aa11.12□□□□□ -0.63
Upf1-202ENSMUST00000215817 Ifitm1Q9D103 106 aa11.12□□□□□ -0.63
Upf1-202ENSMUST00000215817 Ighv1-59A0A0A6YXE0 117 aa11.11□□□□□ -0.63
Upf1-202ENSMUST00000215817 Tenm4Q3UHK6 2771 aa11.11□□□□□ -0.63
Upf1-202ENSMUST00000215817 Vpreb1P13372 142 aa11.1□□□□□ -0.63
Upf1-202ENSMUST00000215817 Tm2d2Q8R0I4 213 aa11.1□□□□□ -0.63
Upf1-202ENSMUST00000215817 Vps13cQ8BX70 3748 aa11.1□□□□□ -0.63
Upf1-202ENSMUST00000215817 A0A286YE02 88 aa11.1□□□□□ -0.63
Upf1-202ENSMUST00000215817 Nf1Q04690 2841 aa11.1□□□□□ -0.63
Upf1-202ENSMUST00000215817 Trav13d-4A0A0G2JFX3 110 aa11.09□□□□□ -0.63
Upf1-202ENSMUST00000215817 Gm10542F6XDR3 90 aa11.09□□□□□ -0.63
Upf1-202ENSMUST00000215817 Lage3Q9CR70 148 aa11.08□□□□□ -0.63
Upf1-202ENSMUST00000215817 Lst1O08843 95 aa11.08□□□□□ -0.64
Upf1-202ENSMUST00000215817 Q9DAB9 146 aa11.08□□□□□ -0.64
Upf1-202ENSMUST00000215817 LrbaQ9ESE1 2856 aa11.08□□□□□ -0.64
Upf1-202ENSMUST00000215817 Trav14d-3-dv8A0A075B619 120 aa11.08□□□□□ -0.64
Upf1-202ENSMUST00000215817 Rtl10D3YWW5 146 aa11.08□□□□□ -0.64
Upf1-202ENSMUST00000215817 B230217C12RikE9Q3Z1 139 aa11.08□□□□□ -0.64
Upf1-202ENSMUST00000215817 Celsr2Q9R0M0 2920 aa11.07□□□□□ -0.64
Upf1-202ENSMUST00000215817 Gm16223Q8CBM3 117 aa11.07□□□□□ -0.64
Upf1-202ENSMUST00000215817 Ighv1-66A0A075B5X5 117 aa11.07□□□□□ -0.64
Upf1-202ENSMUST00000215817 P01729 129 aa11.06□□□□□ -0.64
Upf1-202ENSMUST00000215817 PemtQ61907 199 aa11.06□□□□□ -0.64
Upf1-202ENSMUST00000215817 Reg3dQ9QUS9 175 aa11.06□□□□□ -0.64
Upf1-202ENSMUST00000215817 AngP21570 145 aa11.05□□□□□ -0.64
Upf1-202ENSMUST00000215817 Inafm2A0A1L1STD6 152 aa11.05□□□□□ -0.64
Upf1-202ENSMUST00000215817 1810062G17RikG3X8Y2 129 aa11.05□□□□□ -0.64
Upf1-202ENSMUST00000215817 Trav13-1A0A075B644 110 aa11.05□□□□□ -0.64
Upf1-202ENSMUST00000215817 Trav13-4-dv7A0A075B6C2 110 aa11.05□□□□□ -0.64
Upf1-202ENSMUST00000215817 PscaP57096 123 aa11.05□□□□□ -0.64
Upf1-202ENSMUST00000215817 Defb11Q8R2I7 77 aa11.05□□□□□ -0.64
Upf1-202ENSMUST00000215817 Rnf185Q91YT2 192 aa11.05□□□□□ -0.64
Upf1-202ENSMUST00000215817 Igkv4-61A0A0G2JH00 117 aa11.04□□□□□ -0.64
Upf1-202ENSMUST00000215817 Gm7137J3QMW1 236 aa11.04□□□□□ -0.64
Upf1-202ENSMUST00000215817 Ly6g6cQ9Z1Q4 126 aa11.04□□□□□ -0.64
Upf1-202ENSMUST00000215817 Chchd7Q8K2Q5 85 aa11.04□□□□□ -0.64
Upf1-202ENSMUST00000215817 MifP34884 115 aaKnown RBP11.04□□□□□ -0.64
Upf1-202ENSMUST00000215817 P18527 97 aa11.03□□□□□ -0.64
Upf1-202ENSMUST00000215817 Rnf152Q8BG47 203 aa11.03□□□□□ -0.64
Upf1-202ENSMUST00000215817 Snai3Q9QY31 287 aa11.03□□□□□ -0.64
Upf1-202ENSMUST00000215817 Defb12Q8K4N3 78 aa11.02□□□□□ -0.64
Upf1-202ENSMUST00000215817 2310009B15RikA0A0A6YWI4 143 aa11.02□□□□□ -0.65
Upf1-202ENSMUST00000215817 Wfdc17Q5SSJ1 76 aa11.02□□□□□ -0.65
Upf1-202ENSMUST00000215817 Gm9747Q810H1 104 aa11.02□□□□□ -0.65
Upf1-202ENSMUST00000215817 Dph3Q8K0W9 82 aa11.02□□□□□ -0.65
Upf1-202ENSMUST00000215817 Igkv4-72A0A0B4J1I4 117 aa11.01□□□□□ -0.65
Upf1-202ENSMUST00000215817 Igkv4-54A0A0G2JES9 117 aa11.01□□□□□ -0.65
Upf1-202ENSMUST00000215817 Tmem254aP0DN89 123 aa11.01□□□□□ -0.65
Upf1-202ENSMUST00000215817 Tmem254bP0DN90 123 aa11.01□□□□□ -0.65
Upf1-202ENSMUST00000215817 Tmem254cP0DN91 123 aa11.01□□□□□ -0.65
Upf1-202ENSMUST00000215817 9230102O04RikA2ASX7 82 aa11.01□□□□□ -0.65
Upf1-202ENSMUST00000215817 Ighv8-5A0A0A6YY60 119 aa11□□□□□ -0.65
Upf1-202ENSMUST00000215817 Igkv1-35A0A0G2JDE5 120 aa11□□□□□ -0.65
Upf1-202ENSMUST00000215817 CenpwQ3URR0 86 aa11□□□□□ -0.65
Upf1-202ENSMUST00000215817 Timm17aQ9Z0V8 171 aa11□□□□□ -0.65
Upf1-202ENSMUST00000215817 Gm7138L7N2C3 230 aa11□□□□□ -0.65
Upf1-202ENSMUST00000215817 Gm3238W4VSP7 230 aa11□□□□□ -0.65
Upf1-202ENSMUST00000215817 Ighv1-11A0A0A6YWI9 117 aa10.99□□□□□ -0.65
Upf1-202ENSMUST00000215817 Gm5629P06327 117 aa10.98□□□□□ -0.65
Upf1-202ENSMUST00000215817 FcorP0DJI6 106 aa10.98□□□□□ -0.65
Upf1-202ENSMUST00000215817 Vpreb2P13373 142 aa10.98□□□□□ -0.65
Upf1-202ENSMUST00000215817 1700012A03RikQ9DAF1 130 aa10.98□□□□□ -0.65
Upf1-202ENSMUST00000215817 Fgfbp3Q1HCM0 245 aa10.98□□□□□ -0.65
Upf1-202ENSMUST00000215817 Gm10509O88255 85 aa10.97□□□□□ -0.65
Upf1-202ENSMUST00000215817 Pou2af1Q64693 256 aa10.97□□□□□ -0.65
Upf1-202ENSMUST00000215817 Ly6gP35461 111 aa10.96□□□□□ -0.65
Upf1-202ENSMUST00000215817 Trav9n-4A0A075B631 113 aa10.96□□□□□ -0.65
Upf1-202ENSMUST00000215817 Ighv1-72P01751 139 aa10.96□□□□□ -0.66
Upf1-202ENSMUST00000215817 Trav13-2A0A075B649 110 aa10.96□□□□□ -0.66
Upf1-202ENSMUST00000215817 Igkv4-58A0A0G2JGI6 119 aa10.95□□□□□ -0.66
Upf1-202ENSMUST00000215817 Camk2n2Q78WH7 79 aa10.94□□□□□ -0.66
Upf1-202ENSMUST00000215817 Trbv13-2A0A140T8N6 113 aa10.94□□□□□ -0.66
Upf1-202ENSMUST00000215817 Tex15F8VPN2 2785 aa10.94□□□□□ -0.66
Upf1-202ENSMUST00000215817 Crip3Q6Q6R3 243 aa10.94□□□□□ -0.66
Upf1-202ENSMUST00000215817 Igkv2-109A0A075B5K6 120 aa10.93□□□□□ -0.66
Upf1-202ENSMUST00000215817 Lama5Q61001 3718 aa10.93□□□□□ -0.66
Upf1-202ENSMUST00000215817 Trav4-3A0A0B4J1K1 110 aa10.93□□□□□ -0.66
Upf1-202ENSMUST00000215817 Trav13n-2A0A0G2JF93 110 aa10.93□□□□□ -0.66
Upf1-202ENSMUST00000215817 Smim1P0C8K7 78 aa10.93□□□□□ -0.66
Upf1-202ENSMUST00000215817 B230359F08RikA0A0B4J1K3 109 aa10.93□□□□□ -0.66
Upf1-202ENSMUST00000215817 Muc5acE9QAQ8 3455 aa10.92□□□□□ -0.66
Upf1-202ENSMUST00000215817 Polr2kQ63871 58 aa10.91□□□□□ -0.66
Upf1-202ENSMUST00000215817 Spink13Q3UTS8 97 aa10.91□□□□□ -0.66
Upf1-202ENSMUST00000215817 Serp2Q6TAW2 65 aa10.91□□□□□ -0.66
Upf1-202ENSMUST00000215817 Gm10337F7DEP7 55 aa10.91□□□□□ -0.66
Upf1-202ENSMUST00000215817 Igkv4-78A0A0A6YYE5 119 aa10.9□□□□□ -0.66
Upf1-202ENSMUST00000215817 4930546C10RikE9Q4Y3 121 aa10.9□□□□□ -0.66
Upf1-202ENSMUST00000215817 Acyp1P56376 99 aa10.9□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 108.1 ms