RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 FlnbQ80X90 2602 aaKnown RBP11.76□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 Fhl2O70433 279 aa11.76□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 Trav14-1A0A0G2JF94 121 aa11.76□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 Cd27P41272 250 aa11.74□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 CrygfQ9CXV3 174 aa11.74□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 Igkv8-21A0A140T8P7 120 aa11.73□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 BaalcQ8VHV1 145 aa11.73□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 TroQ6DIC6 2087 aa11.73□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 Ighv3-3A0A0A6YWL2 116 aa11.73□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 Ly6gP35461 111 aa11.73□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 5730596B20RikQ8BQ08 205 aa11.73□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 H2al1aQ5M8Q2 105 aa11.73□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 H2al1eQ810S6 105 aa11.73□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 PscaP57096 123 aa11.73□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 Polr2kQ63871 58 aa11.72□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 Zfp292Q9Z2U2 2698 aa11.72□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 Kiaa1549Q68FD9 1940 aa11.72□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 1700011M02RikB1AX35 88 aa11.71□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 Ovol3D3YYM0 189 aa11.71□□□□□ -0.53
Pcdh1-203ENSMUST00000160721 1700074P13RikQ9D9G7 251 aa11.71□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 LhbO09108 141 aa11.71□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 SrarpQ3ULG3 163 aa11.7□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Dnah12Q3V0Q1 3086 aa11.69□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Gm10490F6VBM2 120 aa11.69□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 4930564D02RikQ9D4S4 103 aa11.69□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Ube2d1P61080 147 aaKnown RBP11.69□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 CdsnQ7TPC1 561 aa11.69□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Bri3P28662 125 aa11.68□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Cox8cA6H666 72 aa11.68□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Epg5Q80TA9 2572 aa11.67□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Obox2E9PXV9 151 aa11.67□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Ighv1-59A0A0A6YXE0 117 aa11.67□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Gm9573F7C950 1606 aa11.67□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Col27a1Q5QNQ9 1845 aa11.67□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 2310009B15RikA0A0A6YWI4 143 aa11.66□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 1700056E22RikF7CNM6 234 aa11.66□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Myo18bE9PV66 2605 aa11.66□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Tcl1b5P56845 121 aa11.66□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Ndufb1P0DN34 57 aa11.65□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Gm10577Q3UDV9 132 aa11.65□□□□□ -0.54
Pcdh1-203ENSMUST00000160721 Trbv13-2A0A140T8N6 113 aa11.64□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Wfdc10Q3V2J9 124 aa11.63□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Gm10322F7D7I4 111 aa11.63□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Wfdc13Q5DQQ6 81 aa11.63□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Wfdc15aQ8BH89 80 aa11.63□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 PolqQ8CGS6 2544 aa11.63□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Cep350E9Q309 3095 aa11.63□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Igkv3-12A0A140T8P0 119 aa11.62□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 CnfnQ6PCW6 111 aa11.62□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Gm11011D3Z3L9 86 aa11.62□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Gm3250E9Q1M3 230 aa11.62□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Shisa2Q8QZV2 295 aa11.62□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Ccdc179J3QM76 67 aa11.61□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Gm26566Q8CAC1 153 aa11.61□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 A0A286YE49 62 aa11.61□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 P84750 121 aa11.61□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Lama3Q61789 3330 aa11.61□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 PtprbB2RU80 1998 aa11.61□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Gm10337F7DEP7 55 aa11.6□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Cdc42se2Q8BGH7 84 aa11.6□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Chchd7Q8K2Q5 85 aa11.6□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Gpha2Q925Q5 128 aa11.59□□□□□ -0.55
Pcdh1-203ENSMUST00000160721 Gm10509O88255 85 aa11.58□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Defb42Q8BVB5 75 aa11.57□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Gm20604F8WIA3 75 aa11.57□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 H2al1mQ9DAD9 105 aa11.57□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Defb38Q7TNV7 63 aa11.57□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Gm19935A0A1B0GSF9 52 aa11.57□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Ube2d3P61079 147 aa11.57□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Ube2d2P62838 147 aa11.57□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Gm9922Q8C3P1 144 aa11.57□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Arhgap32Q811P8 2089 aa11.56□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 4930524J08RikQ9CUJ5 163 aa11.56□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Nupr2Q497P3 102 aa11.56□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 SycnQ8VCK7 134 aa11.56□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 CrygeQ03740 174 aa11.55□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Ly6g6cQ9Z1Q4 126 aa11.55□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Gm10267M0QWD8 85 aa11.55□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 B430305J03RikQ8BQQ8 176 aa11.55□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Spink13Q3UTS8 97 aa11.54□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Igkv8-30A0A140T8M3 121 aa11.53□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 A930009A15RikG3UYI6 118 aa11.53□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 A830031A19RikQ8BNT5 113 aa11.53□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 B230217C12RikE9Q3Z1 139 aa11.53□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 CicQ924A2 2510 aa11.52□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Ankrd11E9Q4F7 2643 aa11.52□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 P06329 120 aa11.52□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Gm5142Q8C5X9 133 aa11.52□□□□□ -0.56
Pcdh1-203ENSMUST00000160721 Ifitm6A0A1B0GS75 124 aa11.52□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 Gm10135F6TEE5 83 aa11.52□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 TeppQ6IMH0 216 aa11.52□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 Gm3443F7CCV5 94 aa11.51□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 Pla2g1bQ9Z0Y2 146 aa11.51□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 Serp1Q9Z1W5 66 aa11.5□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 Rpl28P41105 137 aaKnown RBP11.5□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 Gm5464Q3UY29 175 aa11.5□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 Prune2Q52KR3 3084 aa11.5□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 H2al1kJ3QP08 105 aa11.49□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 Crip2Q9DCT8 208 aaKnown RBP11.49□□□□□ -0.57
Pcdh1-203ENSMUST00000160721 Prr9Q8BV84 116 aa11.49□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 52.8 ms