RNA–Protein interactions for RNA: ENSMUST00000066432.11

Scn3a-201, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 9,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-201ENSMUST00000066432 TshbP12656 138 aa5.32□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Rpl39lQ9CQD0 51 aa5.31□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Gm10490F6VBM2 120 aa5.31□□□□□ -1.56
Scn3a-201ENSMUST00000066432 BC025920Q3US60 128 aa5.31□□□□□ -1.56
Scn3a-201ENSMUST00000066432 AtrQ9JKK8 2635 aa5.31□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Klk12B2RVZ0 247 aa5.31□□□□□ -1.56
Scn3a-201ENSMUST00000066432 A830031A19RikQ8BNT5 113 aa5.31□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Prr9Q8BV84 116 aa5.31□□□□□ -1.56
Scn3a-201ENSMUST00000066432 A930009A15RikG3UYI6 118 aa5.31□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Gm26661M0QWV4 156 aa5.31□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Cdc42se2Q8BGH7 84 aa5.31□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Klk5Q9D140 293 aa5.31□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Krtap26-1Q9D7N2 215 aa5.31□□□□□ -1.56
Scn3a-201ENSMUST00000066432 U90926O08546 118 aa5.3□□□□□ -1.56
Scn3a-201ENSMUST00000066432 CrygdP04342 174 aa5.3□□□□□ -1.56
Scn3a-201ENSMUST00000066432 CrygeQ03740 174 aa5.3□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Srsf12Q8C8K3 266 aa5.3□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Gm3443F7CCV5 94 aa5.3□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Sec61gP60060 68 aa5.3□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Ighv1-72P01751 139 aa5.3□□□□□ -1.56
Scn3a-201ENSMUST00000066432 SbsponQ3UPR9 264 aa5.3□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Sprr2jO70561 109 aa5.3□□□□□ -1.56
Scn3a-201ENSMUST00000066432 MifP34884 115 aaKnown RBP5.3□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Smrp1Q2MH31 260 aa5.3□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Gm9903Q8C9Y8 129 aa5.3□□□□□ -1.56
Scn3a-201ENSMUST00000066432 5730596B20RikQ8BQ08 205 aa5.3□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Gm19935A0A1B0GSF9 52 aa5.29□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Ntn5Q3UQ22 452 aa5.29□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Tnfrsf23Q9ER63 176 aa5.29□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Gm9195A0A140LHT4 2805 aa5.29□□□□□ -1.56
Scn3a-201ENSMUST00000066432 CenpwQ3URR0 86 aa5.29□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Gm9767G3X930 207 aa5.29□□□□□ -1.56
Scn3a-201ENSMUST00000066432 P06329 120 aa5.29□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Akap13E9Q394 2776 aa5.29□□□□□ -1.56
Scn3a-201ENSMUST00000066432 P01819 144 aa5.29□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Trbv13-1A0A0B4J1P8 112 aa5.28□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Gm10542F6XDR3 90 aa5.28□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Trav13-1A0A075B644 110 aa5.28□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Gm11011D3Z3L9 86 aa5.28□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Gm6040Q4QY32 63 aa5.28□□□□□ -1.56
Scn3a-201ENSMUST00000066432 SycnQ8VCK7 134 aa5.28□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Igkv1-88A0A140T8N1 120 aa5.28□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Gm20726G3UX18 150 aa5.28□□□□□ -1.56
Scn3a-201ENSMUST00000066432 LhbO09108 141 aa5.28□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Gm17521F6QAC8 156 aa5.27□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Fn1P11276 2477 aaKnown RBP5.27□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Esm1Q9QYY7 184 aa5.27□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Csdc2Q91YQ3 154 aa5.27□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Chchd10Q7TNL9 138 aa5.26□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Trav13-4-dv7A0A075B6C2 110 aa5.26□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Gm10837Q3UTT8 145 aa5.26□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Serp2Q6TAW2 65 aa5.26□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Crip2Q9DCT8 208 aaKnown RBP5.26□□□□□ -1.57
Scn3a-201ENSMUST00000066432 BaalcQ8VHV1 145 aa5.26□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Notch1Q01705 2531 aa5.26□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Gm44965A0A0N4SVR3 59 aa5.26□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Gm9513B3GLJ6 99 aa5.26□□□□□ -1.57
Scn3a-201ENSMUST00000066432 C1qcQ02105 246 aa5.26□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Gm17509Q9CZ61 145 aa5.25□□□□□ -1.57
Scn3a-201ENSMUST00000066432 NrgnP60761 78 aa5.25□□□□□ -1.57
Scn3a-201ENSMUST00000066432 PrlhG3UWC3 86 aa5.25□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Defb10Q8R2I8 73 aa5.25□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Odf3l2Q3TZ65 277 aa5.24□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Apoc4Q61268 124 aa5.24□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Zfand2aQ9JII7 171 aa5.24□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Cd164l2Q9D6W7 172 aa5.24□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Gm11565A2A4M7 156 aa5.24□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Nupr2Q497P3 102 aa5.24□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Trav13-2A0A075B649 110 aa5.24□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Gm16181B0V2H2 73 aa5.24□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Ighv2-5A0A0A6YY69 116 aa5.23□□□□□ -1.57
Scn3a-201ENSMUST00000066432 SelenokQ9JLJ1 94 aa5.23□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Igf1P05017 153 aa5.23□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Prrc2cQ3TLH4 2846 aaKnown RBP5.23□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Itpr1P11881 2749 aa5.23□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Igkv2-109A0A075B5K6 120 aa5.23□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Spata3Q9D9T6 193 aa5.23□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Defb2P82020 71 aa5.23□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Igkv4-92A0A0B4J1I2 117 aa5.22□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Gm11627A6PWP4 55 aa5.22□□□□□ -1.57
Scn3a-201ENSMUST00000066432 H2al1bA0A087WP11 105 aa5.22□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Igkv8-30A0A140T8M3 121 aa5.22□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Wipf1Q8K1I7 493 aa5.22□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Ighv8-11A0A075B5X4 119 aa5.22□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Edn2P22389 175 aa5.21□□□□□ -1.57
Scn3a-201ENSMUST00000066432 Ighv2-2A0A075B5P8 116 aa5.21□□□□□ -1.58
Scn3a-201ENSMUST00000066432 Ighv1-56A0A0A6YXG2 117 aa5.21□□□□□ -1.58
Scn3a-201ENSMUST00000066432 P01821 116 aa5.21□□□□□ -1.58
Scn3a-201ENSMUST00000066432 Gm28374F6SG70 93 aa5.21□□□□□ -1.58
Scn3a-201ENSMUST00000066432 B230217C12RikE9Q3Z1 139 aa5.21□□□□□ -1.58
Scn3a-201ENSMUST00000066432 Igkv3-3A0A140T8Q0 119 aa5.2□□□□□ -1.58
Scn3a-201ENSMUST00000066432 Ly6hQ9WUC3 139 aa5.2□□□□□ -1.58
Scn3a-201ENSMUST00000066432 Igkv1-35A0A0G2JDE5 120 aa5.2□□□□□ -1.58
Scn3a-201ENSMUST00000066432 Trbv13-2A0A140T8N6 113 aa5.2□□□□□ -1.58
Scn3a-201ENSMUST00000066432 6430550D23RikE9Q1X6 194 aa5.2□□□□□ -1.58
Scn3a-201ENSMUST00000066432 H2al1aQ5M8Q2 105 aa5.2□□□□□ -1.58
Scn3a-201ENSMUST00000066432 H2al1eQ810S6 105 aa5.2□□□□□ -1.58
Scn3a-201ENSMUST00000066432 UqcrqQ9CQ69 82 aa5.2□□□□□ -1.58
Scn3a-201ENSMUST00000066432 9530003J23RikQ8BM26 151 aa5.2□□□□□ -1.58
Scn3a-201ENSMUST00000066432 Serp1Q9Z1W5 66 aa5.2□□□□□ -1.58
Retrieved 100 of 22,080 RNA–protein pairs in 63.8 ms