RNA–Protein interactions for RNA: ENSMUST00000027404.11

Ptprn-201, Transcript of Receptor-type tyrosine-protein phosphatase-like N, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptprn, Length 3,554 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptprn-201ENSMUST00000027404 Igkv4-68A0A0B4J1I7 117 aa11.52□□□□□ -0.57
Ptprn-201ENSMUST00000027404 Trav11A0A0B4J1J9 114 aa11.52□□□□□ -0.57
Ptprn-201ENSMUST00000027404 Cox7a1P56392 80 aa11.52□□□□□ -0.57
Ptprn-201ENSMUST00000027404 Hist1h4aP62806 103 aaKnown RBP11.52□□□□□ -0.57
Ptprn-201ENSMUST00000027404 Trav13d-4A0A0G2JFX3 110 aa11.51□□□□□ -0.57
Ptprn-201ENSMUST00000027404 Cops9Q3U898 57 aa11.51□□□□□ -0.57
Ptprn-201ENSMUST00000027404 Defa20Q45VN2 95 aa11.51□□□□□ -0.57
Ptprn-201ENSMUST00000027404 Xcl1P47993 114 aa11.51□□□□□ -0.57
Ptprn-201ENSMUST00000027404 Naa38Q9D2U5 125 aa11.51□□□□□ -0.57
Ptprn-201ENSMUST00000027404 Trav4-3A0A0B4J1K1 110 aa11.5□□□□□ -0.57
Ptprn-201ENSMUST00000027404 P01745 121 aa11.5□□□□□ -0.57
Ptprn-201ENSMUST00000027404 Zfp951A0A087WRH0 451 aa11.5□□□□□ -0.57
Ptprn-201ENSMUST00000027404 4930535I16RikQ9CUI2 172 aa11.49□□□□□ -0.57
Ptprn-201ENSMUST00000027404 Smlr1J3QMJ4 66 aa11.49□□□□□ -0.57
Ptprn-201ENSMUST00000027404 9430069I07RikQ9CX21 111 aa11.49□□□□□ -0.57
Ptprn-201ENSMUST00000027404 ColqO35348 457 aa11.49□□□□□ -0.57
Ptprn-201ENSMUST00000027404 Rnase1P00683 149 aa11.49□□□□□ -0.57
Ptprn-201ENSMUST00000027404 Fgfbp3Q1HCM0 245 aa11.47□□□□□ -0.57
Ptprn-201ENSMUST00000027404 Xirp2Q4U4S6 3784 aa11.47□□□□□ -0.57
Ptprn-201ENSMUST00000027404 Gm16381A0A1Y7VKT9 73 aa11.46□□□□□ -0.58
Ptprn-201ENSMUST00000027404 Cd164l2Q9D6W7 172 aa11.46□□□□□ -0.58
Ptprn-201ENSMUST00000027404 P01755 137 aa11.45□□□□□ -0.58
Ptprn-201ENSMUST00000027404 SbsponQ3UPR9 264 aa11.45□□□□□ -0.58
Ptprn-201ENSMUST00000027404 Lage3Q9CR70 148 aa11.44□□□□□ -0.58
Ptprn-201ENSMUST00000027404 Gm8439G3UWA7 96 aa11.44□□□□□ -0.58
Ptprn-201ENSMUST00000027404 Fxyd5P97808 178 aa11.44□□□□□ -0.58
Ptprn-201ENSMUST00000027404 Srsf12Q8C8K3 266 aa11.44□□□□□ -0.58
Ptprn-201ENSMUST00000027404 Q99M08 65 aa11.44□□□□□ -0.58
Ptprn-201ENSMUST00000027404 Smim26Q3V460 107 aa11.44□□□□□ -0.58
Ptprn-201ENSMUST00000027404 Defa23Q5G866 93 aa11.43□□□□□ -0.58
Ptprn-201ENSMUST00000027404 MplkipQ9D011 178 aa11.43□□□□□ -0.58
Ptprn-201ENSMUST00000027404 Scgb1b2O35176 93 aa11.42□□□□□ -0.58
Ptprn-201ENSMUST00000027404 Trav13-2A0A075B649 110 aa11.41□□□□□ -0.58
Ptprn-201ENSMUST00000027404 Ighv1-61P01749 117 aa11.41□□□□□ -0.58
Ptprn-201ENSMUST00000027404 Cdc42se2Q8BGH7 84 aa11.41□□□□□ -0.58
Ptprn-201ENSMUST00000027404 4930524J08RikQ9CUJ5 163 aa11.41□□□□□ -0.58
Ptprn-201ENSMUST00000027404 Igkv1-117A0A140T8M0 119 aa11.41□□□□□ -0.58
Ptprn-201ENSMUST00000027404 Igkv2-109A0A075B5K6 120 aa11.4□□□□□ -0.58
Ptprn-201ENSMUST00000027404 Defb2P82020 71 aa11.4□□□□□ -0.58
Ptprn-201ENSMUST00000027404 Tex15F8VPN2 2785 aa11.4□□□□□ -0.59
Ptprn-201ENSMUST00000027404 Plac8l1Q08EJ0 177 aa11.38□□□□□ -0.59
Ptprn-201ENSMUST00000027404 Tmem243B2RVB9 118 aa11.38□□□□□ -0.59
Ptprn-201ENSMUST00000027404 Dand5Q76LW6 185 aa11.38□□□□□ -0.59
Ptprn-201ENSMUST00000027404 Klk12B2RVZ0 247 aa11.37□□□□□ -0.59
Ptprn-201ENSMUST00000027404 Defb42Q8BVB5 75 aa11.37□□□□□ -0.59
Ptprn-201ENSMUST00000027404 Mast4Q811L6 2618 aa11.37□□□□□ -0.59
Ptprn-201ENSMUST00000027404 2010109I03RikQ9CQ11 111 aa11.36□□□□□ -0.59
Ptprn-201ENSMUST00000027404 Cox6b1P56391 86 aaKnown RBP11.36□□□□□ -0.59
Ptprn-201ENSMUST00000027404 PtprqP0C5E4 2300 aa11.35□□□□□ -0.59
Ptprn-201ENSMUST00000027404 Gm3233E9Q2H5 230 aa11.35□□□□□ -0.59
Ptprn-201ENSMUST00000027404 Il19Q8CJ70 176 aa11.34□□□□□ -0.59
Ptprn-201ENSMUST00000027404 Lypd5Q9D7Z7 256 aa11.34□□□□□ -0.59
Ptprn-201ENSMUST00000027404 Spata25Q9DA57 226 aa11.34□□□□□ -0.59
Ptprn-201ENSMUST00000027404 MifP34884 115 aaKnown RBP11.34□□□□□ -0.59
Ptprn-201ENSMUST00000027404 GfyJ3KML8 504 aa11.33□□□□□ -0.6
Ptprn-201ENSMUST00000027404 Ppp1r32Q148A4 427 aa11.33□□□□□ -0.6
Ptprn-201ENSMUST00000027404 Gm10577Q3UDV9 132 aa11.33□□□□□ -0.6
Ptprn-201ENSMUST00000027404 Vmo1Q5SXG7 201 aa11.33□□□□□ -0.6
Ptprn-201ENSMUST00000027404 Igkv1-99F6XWB2 120 aa11.32□□□□□ -0.6
Ptprn-201ENSMUST00000027404 B230307C23RikQ8BLB2 64 aa11.32□□□□□ -0.6
Ptprn-201ENSMUST00000027404 E130218I03RikA0A0U1RNU5 63 aa11.32□□□□□ -0.6
Ptprn-201ENSMUST00000027404 Rpl39lQ9CQD0 51 aa11.32□□□□□ -0.6
Ptprn-201ENSMUST00000027404 Col7a1Q63870 2944 aa11.31□□□□□ -0.6
Ptprn-201ENSMUST00000027404 Tfpi2O35536 230 aa11.31□□□□□ -0.6
Ptprn-201ENSMUST00000027404 4930518I15RikQ3V2W7 57 aa11.31□□□□□ -0.6
Ptprn-201ENSMUST00000027404 ScxQ64124 207 aa11.31□□□□□ -0.6
Ptprn-201ENSMUST00000027404 Leap2Q91V13 76 aa11.3□□□□□ -0.6
Ptprn-201ENSMUST00000027404 Rpl28P41105 137 aaKnown RBP11.29□□□□□ -0.6
Ptprn-201ENSMUST00000027404 Notch1Q01705 2531 aa11.29□□□□□ -0.6
Ptprn-201ENSMUST00000027404 Igkv4-53A0A0G2JFC6 119 aa11.29□□□□□ -0.6
Ptprn-201ENSMUST00000027404 4930546C10RikE9Q4Y3 121 aa11.29□□□□□ -0.6
Ptprn-201ENSMUST00000027404 AtrQ9JKK8 2635 aa11.28□□□□□ -0.6
Ptprn-201ENSMUST00000027404 Pla2g1bQ9Z0Y2 146 aa11.27□□□□□ -0.61
Ptprn-201ENSMUST00000027404 BsnO88737 3942 aa11.27□□□□□ -0.61
Ptprn-201ENSMUST00000027404 Igkv8-16A0A0G2JDG9 121 aa11.27□□□□□ -0.61
Ptprn-201ENSMUST00000027404 Acyp1P56376 99 aa11.27□□□□□ -0.61
Ptprn-201ENSMUST00000027404 Gm10549Q3URY4 149 aa11.27□□□□□ -0.61
Ptprn-201ENSMUST00000027404 7530416G11RikJ3QJX6 159 aa11.26□□□□□ -0.61
Ptprn-201ENSMUST00000027404 Wfdc12Q9JHY3 85 aa11.26□□□□□ -0.61
Ptprn-201ENSMUST00000027404 Rpl18aP62717 176 aaKnown RBP11.26□□□□□ -0.61
Ptprn-201ENSMUST00000027404 Ly6c2P0CW03 131 aa11.25□□□□□ -0.61
Ptprn-201ENSMUST00000027404 Csdc2Q91YQ3 154 aa11.25□□□□□ -0.61
Ptprn-201ENSMUST00000027404 Gm5142Q8C5X9 133 aa11.25□□□□□ -0.61
Ptprn-201ENSMUST00000027404 EnhoQ8K1D8 76 aa11.25□□□□□ -0.61
Ptprn-201ENSMUST00000027404 Hspg2Q05793 3707 aaKnown RBP11.24□□□□□ -0.61
Ptprn-201ENSMUST00000027404 Tmem86bQ497J1 226 aa11.24□□□□□ -0.61
Ptprn-201ENSMUST00000027404 CrygaP04345 174 aa11.23□□□□□ -0.61
Ptprn-201ENSMUST00000027404 Tm2d2Q8R0I4 213 aa11.23□□□□□ -0.61
Ptprn-201ENSMUST00000027404 Fam19a1Q7TPG8 133 aa11.22□□□□□ -0.61
Ptprn-201ENSMUST00000027404 Brk1Q91VR8 75 aa11.22□□□□□ -0.61
Ptprn-201ENSMUST00000027404 Gm10518F6UQQ9 182 aa11.22□□□□□ -0.61
Ptprn-201ENSMUST00000027404 Tmem254aP0DN89 123 aa11.22□□□□□ -0.61
Ptprn-201ENSMUST00000027404 Tmem254bP0DN90 123 aa11.22□□□□□ -0.61
Ptprn-201ENSMUST00000027404 Tmem254cP0DN91 123 aa11.22□□□□□ -0.61
Ptprn-201ENSMUST00000027404 Reg3dQ9QUS9 175 aa11.22□□□□□ -0.61
Ptprn-201ENSMUST00000027404 Lamtor3O88653 124 aa11.22□□□□□ -0.61
Ptprn-201ENSMUST00000027404 SmcpP15265 143 aa11.22□□□□□ -0.61
Ptprn-201ENSMUST00000027404 Gm11565A2A4M7 156 aa11.21□□□□□ -0.61
Ptprn-201ENSMUST00000027404 Nbeal2Q6ZQA0 2742 aa11.21□□□□□ -0.61
Ptprn-201ENSMUST00000027404 Igkv8-24A0A140T8P5 121 aa11.21□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 51.5 ms