RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Atp5eP56382 52 aa11.55□□□□□ -0.56
Shh-201ENSMUST00000002708 5730596B20RikQ8BQ08 205 aa11.55□□□□□ -0.56
Shh-201ENSMUST00000002708 Il19Q8CJ70 176 aa11.55□□□□□ -0.56
Shh-201ENSMUST00000002708 Setd2E9Q5F9 2537 aa11.55□□□□□ -0.56
Shh-201ENSMUST00000002708 Igkv1-117A0A140T8M0 119 aa11.55□□□□□ -0.56
Shh-201ENSMUST00000002708 Krtap16-1A2A5X5 502 aa11.55□□□□□ -0.56
Shh-201ENSMUST00000002708 Gm9767G3X930 207 aa11.55□□□□□ -0.56
Shh-201ENSMUST00000002708 P01755 137 aa11.55□□□□□ -0.56
Shh-201ENSMUST00000002708 Ly6c2P0CW03 131 aa11.55□□□□□ -0.56
Shh-201ENSMUST00000002708 Ss18l2Q9D174 77 aa11.55□□□□□ -0.56
Shh-201ENSMUST00000002708 Ighv1-49A0A0A6YWX2 117 aa11.54□□□□□ -0.56
Shh-201ENSMUST00000002708 SbsponQ3UPR9 264 aa11.54□□□□□ -0.56
Shh-201ENSMUST00000002708 Vmo1Q5SXG7 201 aa11.54□□□□□ -0.56
Shh-201ENSMUST00000002708 Hivep3A2A884 2348 aa11.54□□□□□ -0.56
Shh-201ENSMUST00000002708 Trav13d-4A0A0G2JFX3 110 aa11.53□□□□□ -0.56
Shh-201ENSMUST00000002708 CrygaP04345 174 aa11.53□□□□□ -0.56
Shh-201ENSMUST00000002708 Ndufa12Q7TMF3 145 aaKnown RBP11.52□□□□□ -0.57
Shh-201ENSMUST00000002708 4930546C10RikE9Q4Y3 121 aa11.51□□□□□ -0.57
Shh-201ENSMUST00000002708 Apoc4Q61268 124 aa11.51□□□□□ -0.57
Shh-201ENSMUST00000002708 Prh1P05142 261 aa11.51□□□□□ -0.57
Shh-201ENSMUST00000002708 Ppp1r32Q148A4 427 aa11.51□□□□□ -0.57
Shh-201ENSMUST00000002708 Chchd7Q8K2Q5 85 aa11.51□□□□□ -0.57
Shh-201ENSMUST00000002708 Gm10772F7AIG4 85 aa11.5□□□□□ -0.57
Shh-201ENSMUST00000002708 Gpha2Q925Q5 128 aa11.5□□□□□ -0.57
Shh-201ENSMUST00000002708 GfyJ3KML8 504 aa11.5□□□□□ -0.57
Shh-201ENSMUST00000002708 Cox6b1P56391 86 aaKnown RBP11.5□□□□□ -0.57
Shh-201ENSMUST00000002708 Gm867A0A1W2P7T4 151 aa11.5□□□□□ -0.57
Shh-201ENSMUST00000002708 Tomm7Q9D173 55 aa11.49□□□□□ -0.57
Shh-201ENSMUST00000002708 Gm10577Q3UDV9 132 aa11.49□□□□□ -0.57
Shh-201ENSMUST00000002708 Trav13-1A0A075B644 110 aa11.48□□□□□ -0.57
Shh-201ENSMUST00000002708 SmcpP15265 143 aa11.48□□□□□ -0.57
Shh-201ENSMUST00000002708 4930524J08RikQ9CUJ5 163 aa11.48□□□□□ -0.57
Shh-201ENSMUST00000002708 Defb50Q6TU36 73 aa11.48□□□□□ -0.57
Shh-201ENSMUST00000002708 Trav13n-2A0A0G2JF93 110 aa11.47□□□□□ -0.57
Shh-201ENSMUST00000002708 Krtap24-1G3X9A2 248 aa11.47□□□□□ -0.57
Shh-201ENSMUST00000002708 Defa2P28309 93 aa11.47□□□□□ -0.57
Shh-201ENSMUST00000002708 Gm3233E9Q2H5 230 aa11.46□□□□□ -0.58
Shh-201ENSMUST00000002708 Defa25Q5G864 92 aa11.45□□□□□ -0.58
Shh-201ENSMUST00000002708 Tm2d2Q8R0I4 213 aa11.45□□□□□ -0.58
Shh-201ENSMUST00000002708 Erdr1J3QMM0 206 aa11.45□□□□□ -0.58
Shh-201ENSMUST00000002708 Pla2g1bQ9Z0Y2 146 aa11.45□□□□□ -0.58
Shh-201ENSMUST00000002708 Gm10549Q3URY4 149 aa11.44□□□□□ -0.58
Shh-201ENSMUST00000002708 Lage3Q9CR70 148 aa11.44□□□□□ -0.58
Shh-201ENSMUST00000002708 Ighv8-11A0A075B5X4 119 aa11.44□□□□□ -0.58
Shh-201ENSMUST00000002708 D130052B06RikQ3UW13 202 aa11.44□□□□□ -0.58
Shh-201ENSMUST00000002708 9430069I07RikQ9CX21 111 aa11.44□□□□□ -0.58
Shh-201ENSMUST00000002708 MobpQ9D2P8 170 aa11.44□□□□□ -0.58
Shh-201ENSMUST00000002708 Igkv6-13A0A0G2JGY3 119 aa11.43□□□□□ -0.58
Shh-201ENSMUST00000002708 Rpl28P41105 137 aaKnown RBP11.43□□□□□ -0.58
Shh-201ENSMUST00000002708 BB014433Q8C5R5 389 aa11.43□□□□□ -0.58
Shh-201ENSMUST00000002708 Igkv1-99F6XWB2 120 aa11.42□□□□□ -0.58
Shh-201ENSMUST00000002708 Zfand2aQ9JII7 171 aa11.42□□□□□ -0.58
Shh-201ENSMUST00000002708 Igf1P05017 153 aa11.42□□□□□ -0.58
Shh-201ENSMUST00000002708 Cops9Q3U898 57 aa11.41□□□□□ -0.58
Shh-201ENSMUST00000002708 Tenm4Q3UHK6 2771 aa11.4□□□□□ -0.58
Shh-201ENSMUST00000002708 Igkv4-72A0A0B4J1I4 117 aa11.4□□□□□ -0.59
Shh-201ENSMUST00000002708 Znf414Q9DCK4 299 aa11.4□□□□□ -0.59
Shh-201ENSMUST00000002708 Gm20726G3UX18 150 aa11.39□□□□□ -0.59
Shh-201ENSMUST00000002708 Scgb1b2O35176 93 aa11.39□□□□□ -0.59
Shh-201ENSMUST00000002708 Gm7102J3QQ10 178 aa11.39□□□□□ -0.59
Shh-201ENSMUST00000002708 Xcl1P47993 114 aa11.38□□□□□ -0.59
Shh-201ENSMUST00000002708 Dand5Q76LW6 185 aa11.38□□□□□ -0.59
Shh-201ENSMUST00000002708 ScxQ64124 207 aa11.37□□□□□ -0.59
Shh-201ENSMUST00000002708 Igkv4-54A0A0G2JES9 117 aa11.36□□□□□ -0.59
Shh-201ENSMUST00000002708 Gm3618D3Z4P5 127 aa11.36□□□□□ -0.59
Shh-201ENSMUST00000002708 Cystm1Q8K353 104 aa11.36□□□□□ -0.59
Shh-201ENSMUST00000002708 4930535I16RikQ9CUI2 172 aa11.36□□□□□ -0.59
Shh-201ENSMUST00000002708 Gm2916Q9D9B9 127 aa11.36□□□□□ -0.59
Shh-201ENSMUST00000002708 Ighv2-9-1A0A075B697 116 aa11.36□□□□□ -0.59
Shh-201ENSMUST00000002708 Mzt1Q8BUR9 78 aa11.36□□□□□ -0.59
Shh-201ENSMUST00000002708 4930519P11RikQ9CUJ8 166 aa11.36□□□□□ -0.59
Shh-201ENSMUST00000002708 Tex15F8VPN2 2785 aa11.36□□□□□ -0.59
Shh-201ENSMUST00000002708 Nbeal2Q6ZQA0 2742 aa11.36□□□□□ -0.59
Shh-201ENSMUST00000002708 Prss58Q8BW11 241 aa11.36□□□□□ -0.59
Shh-201ENSMUST00000002708 2010109I03RikQ9CQ11 111 aa11.36□□□□□ -0.59
Shh-201ENSMUST00000002708 Dnal4Q9DCM4 105 aa11.35□□□□□ -0.59
Shh-201ENSMUST00000002708 Trav13-2A0A075B649 110 aa11.35□□□□□ -0.59
Shh-201ENSMUST00000002708 Igkv4-53A0A0G2JFC6 119 aa11.35□□□□□ -0.59
Shh-201ENSMUST00000002708 Gm16381A0A1Y7VKT9 73 aa11.35□□□□□ -0.59
Shh-201ENSMUST00000002708 1810062G17RikG3X8Y2 129 aa11.35□□□□□ -0.59
Shh-201ENSMUST00000002708 Spink4O35679 86 aa11.35□□□□□ -0.59
Shh-201ENSMUST00000002708 Hbb-b2P02089 147 aa11.35□□□□□ -0.59
Shh-201ENSMUST00000002708 Fbn1Q61554 2873 aaKnown RBP11.34□□□□□ -0.59
Shh-201ENSMUST00000002708 Zfp951A0A087WRH0 451 aa11.34□□□□□ -0.59
Shh-201ENSMUST00000002708 Leap2Q91V13 76 aa11.34□□□□□ -0.59
Shh-201ENSMUST00000002708 Gm5142Q8C5X9 133 aa11.32□□□□□ -0.6
Shh-201ENSMUST00000002708 Gm43218A0A0G2JGT0 114 aa11.32□□□□□ -0.6
Shh-201ENSMUST00000002708 7530416G11RikJ3QJX6 159 aa11.31□□□□□ -0.6
Shh-201ENSMUST00000002708 Rpl39lQ9CQD0 51 aa11.3□□□□□ -0.6
Shh-201ENSMUST00000002708 CicQ924A2 2510 aa11.3□□□□□ -0.6
Shh-201ENSMUST00000002708 Igkv2-109A0A075B5K6 120 aa11.3□□□□□ -0.6
Shh-201ENSMUST00000002708 Ifitm6A0A1B0GS75 124 aa11.3□□□□□ -0.6
Shh-201ENSMUST00000002708 MifP34884 115 aaKnown RBP11.3□□□□□ -0.6
Shh-201ENSMUST00000002708 PrcdQ00LT2 53 aa11.3□□□□□ -0.6
Shh-201ENSMUST00000002708 Naa38Q9D2U5 125 aa11.3□□□□□ -0.6
Shh-201ENSMUST00000002708 Odf3l2Q3TZ65 277 aa11.29□□□□□ -0.6
Shh-201ENSMUST00000002708 Q8R092 253 aa11.29□□□□□ -0.6
Shh-201ENSMUST00000002708 Klk12B2RVZ0 247 aa11.28□□□□□ -0.6
Shh-201ENSMUST00000002708 Defa20Q45VN2 95 aa11.28□□□□□ -0.6
Shh-201ENSMUST00000002708 CrygfQ9CXV3 174 aa11.28□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 49.5 ms