RNA–Protein interactions for RNA: ENSMUST00000109444.2

Col4a3bp-202, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

TSL 1 (best) BASIC

Gene Col4a3bp, Length 5,285 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-202ENSMUST00000109444 1700012A03RikQ9DAF1 130 aa13.12□□□□□ -0.31
Col4a3bp-202ENSMUST00000109444 Wisp2Q9Z0G4 251 aa13.12□□□□□ -0.31
Col4a3bp-202ENSMUST00000109444 Gm9573F7C950 1606 aa13.12□□□□□ -0.31
Col4a3bp-202ENSMUST00000109444 Ighv1-59A0A0A6YXE0 117 aa13.12□□□□□ -0.31
Col4a3bp-202ENSMUST00000109444 Gm17521F6QAC8 156 aa13.12□□□□□ -0.31
Col4a3bp-202ENSMUST00000109444 Znf575Q3TXZ1 239 aa13.11□□□□□ -0.31
Col4a3bp-202ENSMUST00000109444 DysfQ9ESD7 2090 aa13.11□□□□□ -0.31
Col4a3bp-202ENSMUST00000109444 Gm19935A0A1B0GSF9 52 aa13.11□□□□□ -0.31
Col4a3bp-202ENSMUST00000109444 Plac8l1Q08EJ0 177 aa13.11□□□□□ -0.31
Col4a3bp-202ENSMUST00000109444 Spink4O35679 86 aa13.11□□□□□ -0.31
Col4a3bp-202ENSMUST00000109444 Crip3Q6Q6R3 243 aa13.11□□□□□ -0.31
Col4a3bp-202ENSMUST00000109444 Edn2P22389 175 aa13.1□□□□□ -0.31
Col4a3bp-202ENSMUST00000109444 TectaO08523 2155 aa13.1□□□□□ -0.31
Col4a3bp-202ENSMUST00000109444 Gm12057A0A087WR21 115 aa13.1□□□□□ -0.31
Col4a3bp-202ENSMUST00000109444 A830005F24RikQ8BRT5 167 aa13.1□□□□□ -0.31
Col4a3bp-202ENSMUST00000109444 Abca4O35600 2310 aa13.09□□□□□ -0.31
Col4a3bp-202ENSMUST00000109444 Prr15lQ8JZM2 100 aa13.09□□□□□ -0.31
Col4a3bp-202ENSMUST00000109444 Gm8439G3UWA7 96 aa13.09□□□□□ -0.31
Col4a3bp-202ENSMUST00000109444 Cdc42se2Q8BGH7 84 aa13.08□□□□□ -0.31
Col4a3bp-202ENSMUST00000109444 Defb12Q8K4N3 78 aa13.08□□□□□ -0.31
Col4a3bp-202ENSMUST00000109444 1700011M02RikB1AX35 88 aa13.08□□□□□ -0.32
Col4a3bp-202ENSMUST00000109444 PlaurP35456 327 aa13.08□□□□□ -0.32
Col4a3bp-202ENSMUST00000109444 Atox1O08997 68 aaKnown RBP13.07□□□□□ -0.32
Col4a3bp-202ENSMUST00000109444 Ly6c2P0CW03 131 aa13.07□□□□□ -0.32
Col4a3bp-202ENSMUST00000109444 Cspg4Q8VHY0 2327 aa13.07□□□□□ -0.32
Col4a3bp-202ENSMUST00000109444 Ighv1-72P01751 139 aa13.07□□□□□ -0.32
Col4a3bp-202ENSMUST00000109444 Cd27P41272 250 aa13.07□□□□□ -0.32
Col4a3bp-202ENSMUST00000109444 Rpl28P41105 137 aaKnown RBP13.06□□□□□ -0.32
Col4a3bp-202ENSMUST00000109444 Lrp4Q8VI56 1905 aa13.06□□□□□ -0.32
Col4a3bp-202ENSMUST00000109444 Gm21748Q3UE70 102 aa13.05□□□□□ -0.32
Col4a3bp-202ENSMUST00000109444 Ighv2-9-1A0A075B697 116 aa13.05□□□□□ -0.32
Col4a3bp-202ENSMUST00000109444 Fam19a1Q7TPG8 133 aa13.05□□□□□ -0.32
Col4a3bp-202ENSMUST00000109444 ColqO35348 457 aa13.04□□□□□ -0.32
Col4a3bp-202ENSMUST00000109444 Gm9922Q8C3P1 144 aa13.04□□□□□ -0.32
Col4a3bp-202ENSMUST00000109444 Dscaml1Q4VA61 2053 aa13.04□□□□□ -0.32
Col4a3bp-202ENSMUST00000109444 P01755 137 aa13.03□□□□□ -0.32
Col4a3bp-202ENSMUST00000109444 Defb42Q8BVB5 75 aa13.03□□□□□ -0.32
Col4a3bp-202ENSMUST00000109444 Col4a4Q9QZR9 1682 aa13.03□□□□□ -0.32
Col4a3bp-202ENSMUST00000109444 P06320 134 aa13.03□□□□□ -0.32
Col4a3bp-202ENSMUST00000109444 SptssbQ925E8 76 aa13.03□□□□□ -0.32
Col4a3bp-202ENSMUST00000109444 2010109I03RikQ9CQ11 111 aa13.03□□□□□ -0.32
Col4a3bp-202ENSMUST00000109444 9530003J23RikQ8BM26 151 aa13.02□□□□□ -0.32
Col4a3bp-202ENSMUST00000109444 NrgnP60761 78 aa13.02□□□□□ -0.33
Col4a3bp-202ENSMUST00000109444 E130114P18RikF6S0S7 154 aa13.01□□□□□ -0.33
Col4a3bp-202ENSMUST00000109444 Cox7bP56393 80 aa13.01□□□□□ -0.33
Col4a3bp-202ENSMUST00000109444 Gm26566Q8CAC1 153 aa13.01□□□□□ -0.33
Col4a3bp-202ENSMUST00000109444 Q8K1L6 76 aa13.01□□□□□ -0.33
Col4a3bp-202ENSMUST00000109444 Gm10337F7DEP7 55 aa13.01□□□□□ -0.33
Col4a3bp-202ENSMUST00000109444 4930556J24RikQ9D4U7 146 aa13.01□□□□□ -0.33
Col4a3bp-202ENSMUST00000109444 PrlhG3UWC3 86 aa13□□□□□ -0.33
Col4a3bp-202ENSMUST00000109444 SvipQ3UZP4 77 aa13□□□□□ -0.33
Col4a3bp-202ENSMUST00000109444 BC025920Q3US60 128 aa12.99□□□□□ -0.33
Col4a3bp-202ENSMUST00000109444 4930524J08RikQ9CUJ5 163 aa12.99□□□□□ -0.33
Col4a3bp-202ENSMUST00000109444 Dopey1Q8BL99 2399 aa12.98□□□□□ -0.33
Col4a3bp-202ENSMUST00000109444 Lce6aD3YV94 81 aa12.98□□□□□ -0.33
Col4a3bp-202ENSMUST00000109444 Ighv8-11A0A075B5X4 119 aa12.98□□□□□ -0.33
Col4a3bp-202ENSMUST00000109444 PtprbB2RU80 1998 aa12.98□□□□□ -0.33
Col4a3bp-202ENSMUST00000109444 Gm10549Q3URY4 149 aa12.98□□□□□ -0.33
Col4a3bp-202ENSMUST00000109444 BaalcQ8VHV1 145 aa12.97□□□□□ -0.33
Col4a3bp-202ENSMUST00000109444 Med13lQ6JPI3 2207 aa12.97□□□□□ -0.33
Col4a3bp-202ENSMUST00000109444 Igkv3-10A0A0G2JGN0 119 aa12.97□□□□□ -0.33
Col4a3bp-202ENSMUST00000109444 Shisa2Q8QZV2 295 aa12.97□□□□□ -0.33
Col4a3bp-202ENSMUST00000109444 Gm10647E9Q8X0 124 aa12.96□□□□□ -0.33
Col4a3bp-202ENSMUST00000109444 Ndufb1P0DN34 57 aa12.96□□□□□ -0.33
Col4a3bp-202ENSMUST00000109444 Ccdc179J3QM76 67 aa12.96□□□□□ -0.34
Col4a3bp-202ENSMUST00000109444 Znf580Q9DB38 172 aa12.95□□□□□ -0.34
Col4a3bp-202ENSMUST00000109444 Notch3Q61982 2318 aa12.95□□□□□ -0.34
Col4a3bp-202ENSMUST00000109444 B230217C12RikE9Q3Z1 139 aa12.95□□□□□ -0.34
Col4a3bp-202ENSMUST00000109444 DscamQ9ERC8 2013 aa12.95□□□□□ -0.34
Col4a3bp-202ENSMUST00000109444 Rtl10D3YWW5 146 aa12.95□□□□□ -0.34
Col4a3bp-202ENSMUST00000109444 Obox2E9PXV9 151 aa12.94□□□□□ -0.34
Col4a3bp-202ENSMUST00000109444 SonQ9QX47 2444 aaKnown RBP12.94□□□□□ -0.34
Col4a3bp-202ENSMUST00000109444 Psmb11Q8BG41 302 aa12.94□□□□□ -0.34
Col4a3bp-202ENSMUST00000109444 A930009A15RikG3UYI6 118 aa12.93□□□□□ -0.34
Col4a3bp-202ENSMUST00000109444 Serp1Q9Z1W5 66 aa12.93□□□□□ -0.34
Col4a3bp-202ENSMUST00000109444 Prrc2aQ7TSC1 2158 aaKnown RBP12.92□□□□□ -0.34
Col4a3bp-202ENSMUST00000109444 Spink13Q3UTS8 97 aa12.92□□□□□ -0.34
Col4a3bp-202ENSMUST00000109444 Col27a1Q5QNQ9 1845 aa12.92□□□□□ -0.34
Col4a3bp-202ENSMUST00000109444 Nav2E9Q842 2432 aa12.91□□□□□ -0.34
Col4a3bp-202ENSMUST00000109444 4930535I16RikQ9CUI2 172 aa12.91□□□□□ -0.34
Col4a3bp-202ENSMUST00000109444 Prr9Q8BV84 116 aa12.91□□□□□ -0.34
Col4a3bp-202ENSMUST00000109444 Cyyr1Q8VIH7 165 aa12.91□□□□□ -0.34
Col4a3bp-202ENSMUST00000109444 4930432M17RikQ3V0W9 174 aa12.91□□□□□ -0.34
Col4a3bp-202ENSMUST00000109444 Igkv3-4A0A140T8Q4 119 aa12.9□□□□□ -0.34
Col4a3bp-202ENSMUST00000109444 Sprr2jO70561 109 aa12.9□□□□□ -0.34
Col4a3bp-202ENSMUST00000109444 Wfdc10Q3V2J9 124 aa12.9□□□□□ -0.34
Col4a3bp-202ENSMUST00000109444 Gm10845Q3UNY9 185 aa12.9□□□□□ -0.34
Col4a3bp-202ENSMUST00000109444 Gm5142Q8C5X9 133 aa12.89□□□□□ -0.35
Col4a3bp-202ENSMUST00000109444 Sec61gP60060 68 aa12.89□□□□□ -0.35
Col4a3bp-202ENSMUST00000109444 FshbQ60687 130 aa12.89□□□□□ -0.35
Col4a3bp-202ENSMUST00000109444 Esm1Q9QYY7 184 aa12.89□□□□□ -0.35
Col4a3bp-202ENSMUST00000109444 Igkv4-92A0A0B4J1I2 117 aa12.89□□□□□ -0.35
Col4a3bp-202ENSMUST00000109444 Gm10135F6TEE5 83 aa12.89□□□□□ -0.35
Col4a3bp-202ENSMUST00000109444 H2al1bA0A087WP11 105 aa12.88□□□□□ -0.35
Col4a3bp-202ENSMUST00000109444 Cdip1Q9DB75 208 aa12.88□□□□□ -0.35
Col4a3bp-202ENSMUST00000109444 NpwA0A1L1STR8 176 aa12.87□□□□□ -0.35
Col4a3bp-202ENSMUST00000109444 TeppQ6IMH0 216 aa12.86□□□□□ -0.35
Col4a3bp-202ENSMUST00000109444 Ep300B2RWS6 2412 aa12.85□□□□□ -0.35
Col4a3bp-202ENSMUST00000109444 TroQ6DIC6 2087 aa12.85□□□□□ -0.35
Col4a3bp-202ENSMUST00000109444 A0A286YE49 62 aa12.85□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 46.7 ms