RNA–Protein interactions for RNA: ENSMUST00000066432.11

Scn3a-201, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 9,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-201ENSMUST00000066432 Wfdc10Q3V2J9 124 aa5.41□□□□□ -1.54
Scn3a-201ENSMUST00000066432 Iglc1A0A0G2JE99 106 aa5.41□□□□□ -1.54
Scn3a-201ENSMUST00000066432 Tfpi2O35536 230 aa5.41□□□□□ -1.54
Scn3a-201ENSMUST00000066432 P01843 105 aa5.41□□□□□ -1.54
Scn3a-201ENSMUST00000066432 Cox7a1P56392 80 aa5.41□□□□□ -1.54
Scn3a-201ENSMUST00000066432 Trav13d-1A0A075B606 110 aa5.4□□□□□ -1.54
Scn3a-201ENSMUST00000066432 Trav7-6A0A075B640 112 aa5.4□□□□□ -1.54
Scn3a-201ENSMUST00000066432 Gm7257D3YX25 99 aa5.4□□□□□ -1.54
Scn3a-201ENSMUST00000066432 Hrct1Q9D6B9 109 aa5.4□□□□□ -1.54
Scn3a-201ENSMUST00000066432 Pla2g1bQ9Z0Y2 146 aa5.4□□□□□ -1.54
Scn3a-201ENSMUST00000066432 Trav9n-4A0A075B631 113 aa5.4□□□□□ -1.54
Scn3a-201ENSMUST00000066432 Ighv2-9A0A075B5Q5 116 aa5.4□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Gm17577J3QNF7 156 aa5.4□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Gm43218A0A0G2JGT0 114 aa5.4□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Ighv8-5A0A0A6YY60 119 aa5.4□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Igll1P20764 209 aa5.4□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Cd24P24807 76 aa5.4□□□□□ -1.55
Scn3a-201ENSMUST00000066432 2310009B15RikA0A0A6YWI4 143 aa5.39□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Gm10401E9Q3K6 71 aa5.39□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Ly6c2P0CW03 131 aa5.39□□□□□ -1.55
Scn3a-201ENSMUST00000066432 NpbQ8K4P1 119 aa5.39□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Rpl39P62892 51 aa5.39□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Vpreb2P13373 142 aa5.39□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Polr2kQ63871 58 aa5.39□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Cryba4Q9JJV0 196 aa5.39□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Fgf23Q9EPC2 251 aa5.39□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Gm26602M0QWA4 95 aa5.39□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Spink8Q09TK9 105 aa5.39□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Igkv6-13A0A0G2JGY3 119 aa5.39□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Col8a2P25318 699 aa5.39□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Defb42Q8BVB5 75 aa5.38□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Higd2aQ9CQJ1 106 aa5.38□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Bri3P28662 125 aa5.38□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Gm10337F7DEP7 55 aa5.38□□□□□ -1.55
Scn3a-201ENSMUST00000066432 4930556J24RikQ9D4U7 146 aa5.38□□□□□ -1.55
Scn3a-201ENSMUST00000066432 CrygfQ9CXV3 174 aa5.38□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Ighv13-2A0A0A6YWN3 119 aa5.38□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Rnf185Q91YT2 192 aa5.37□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Wfdc15aQ8BH89 80 aa5.37□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Trav13n-1A0A0G2JEU8 110 aa5.37□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Ube2d4D3YUH6 135 aa5.37□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Spink4O35679 86 aa5.37□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Ube2d3P61079 147 aa5.37□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Ube2d2P62838 147 aa5.37□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Ufsp1Q9CZP0 217 aa5.37□□□□□ -1.55
Scn3a-201ENSMUST00000066432 P84751 237 aa5.37□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Rpl18aP62717 176 aaKnown RBP5.36□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Prr3Q811B5 190 aaKnown RBP5.36□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Gm12689Q8BQU9 117 aa5.36□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Q9D131 166 aa5.36□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Gcn1E9PVA8 2671 aaKnown RBP5.36□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Gm21748Q3UE70 102 aa5.36□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Gm20730A0A075B5J6 119 aa5.36□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Ighv1-62-1A0A075B5U3 116 aa5.36□□□□□ -1.55
Scn3a-201ENSMUST00000066432 AW011738F6S7Q2 159 aa5.36□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Cox7bP56393 80 aa5.36□□□□□ -1.55
Scn3a-201ENSMUST00000066432 PlaurP35456 327 aa5.36□□□□□ -1.55
Scn3a-201ENSMUST00000066432 P01823 113 aa5.36□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Defb29Q8BGW9 78 aa5.36□□□□□ -1.55
Scn3a-201ENSMUST00000066432 C920008G01RikA0A0B4J1N1 112 aa5.35□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Ighv8-13A0A075B5Y0 101 aa5.35□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Igkv1-122A0A140T8M9 119 aa5.35□□□□□ -1.55
Scn3a-201ENSMUST00000066432 P01747 120 aa5.35□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Tax1bp3Q9DBG9 124 aa5.35□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Rpl28P41105 137 aaKnown RBP5.35□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Plac8l1Q08EJ0 177 aa5.35□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Naa38Q9D2U5 125 aa5.35□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Triap1Q9D8Z2 76 aa5.35□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Fam19a3Q7TPG6 132 aa5.34□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Ifitm6A0A1B0GS75 124 aa5.34□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Trav14-1A0A0G2JF94 121 aa5.34□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Gata1P17679 413 aa5.34□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Hectd1Q69ZR2 2618 aaKnown RBP5.34□□□□□ -1.55
Scn3a-201ENSMUST00000066432 FcorP0DJI6 106 aa5.34□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Vpreb1P13372 142 aa5.34□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Ube2d1P61080 147 aaKnown RBP5.34□□□□□ -1.55
Scn3a-201ENSMUST00000066432 Obox2E9PXV9 151 aa5.34□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Gm9805F6YK59 57 aa5.33□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Brk1Q91VR8 75 aa5.33□□□□□ -1.56
Scn3a-201ENSMUST00000066432 MplkipQ9D011 178 aa5.33□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Vpreb3D3Z6J4 130 aa5.33□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Igkv4-58A0A0G2JGI6 119 aa5.33□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Lce6aD3YV94 81 aa5.33□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Ndufb1P0DN34 57 aa5.33□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Cfc1P97766 202 aa5.33□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Fam19a1Q7TPG8 133 aa5.33□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Spag11Q8K4N2 71 aa5.33□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Tnrc18Q80WC3 2878 aa5.32□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Rbx1P62878 108 aa5.32□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Smim1P0C8K7 78 aa5.32□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Trav13d-4A0A0G2JFX3 110 aa5.32□□□□□ -1.56
Scn3a-201ENSMUST00000066432 A830005F24RikQ8BRT5 167 aa5.32□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Igkv3-10A0A0G2JGN0 119 aa5.32□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Igkv8-21A0A140T8P7 120 aa5.32□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Defb47Q30KN1 79 aa5.32□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Igkv3-4A0A140T8Q4 119 aa5.32□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Gm10549Q3URY4 149 aa5.32□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Gm42674D3YUT9 64 aa5.32□□□□□ -1.56
Scn3a-201ENSMUST00000066432 OdaphJ3QNT8 126 aa5.32□□□□□ -1.56
Scn3a-201ENSMUST00000066432 Atox1O08997 68 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 22,080 RNA–protein pairs in 386.1 ms