RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 4930544G11RikQ9CR99 193 aa10.57□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Defa4P28311 92 aa10.57□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 A830031A19RikQ8BNT5 113 aa10.57□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Lelp1Q9DAE3 120 aa10.57□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Dnal4Q9DCM4 105 aa10.57□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Igkv1-35A0A0G2JDE5 120 aa10.56□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 4930519P11RikQ9CUJ8 166 aa10.56□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Gm37988J3QM41 62 aa10.56□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Tfpi2O35536 230 aa10.56□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 P01729 129 aa10.56□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Cdc42se2Q8BGH7 84 aa10.56□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Trbv30A0A0B4J1P1 111 aa10.55□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Gm21994F6T2D2 329 aa10.55□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Klk1b4P00757 256 aa10.55□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Tm2d2Q8R0I4 213 aa10.55□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Ube2e2Q91W82 201 aa10.55□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Sorl1O88307 2215 aaKnown RBP10.55□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Spink1P09036 80 aa10.55□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Gm10300Q8C8P7 189 aa10.55□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Cspg4Q8VHY0 2327 aa10.55□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Ubr5Q80TP3 2792 aa10.54□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 P01745 121 aa10.54□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Ndufa12Q7TMF3 145 aaKnown RBP10.54□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Defb29Q8BGW9 78 aa10.54□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Il19Q8CJ70 176 aa10.54□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 9430069I07RikQ9CX21 111 aa10.54□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Gm10647E9Q8X0 124 aa10.54□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Rpl36aP83882 106 aaKnown RBP10.54□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Dand5Q76LW6 185 aa10.54□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Dmbt1Q60997 2085 aa10.54□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 LrbaQ9ESE1 2856 aa10.53□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Igkv1-117A0A140T8M0 119 aa10.53□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Plac8l1Q08EJ0 177 aa10.53□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Taf15Q8BQ46 557 aaKnown RBP10.53□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Q99M08 65 aa10.53□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Igkv6-13A0A0G2JGY3 119 aa10.53□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Gm16381A0A1Y7VKT9 73 aa10.53□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Rpl18aP62717 176 aaKnown RBP10.53□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 4930518I15RikQ3V2W7 57 aa10.53□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Pfn2Q9JJV2 140 aa10.53□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Ankhd1E9PUR0 2548 aaKnown RBP10.52□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Ighv8-11A0A075B5X4 119 aa10.52□□□□□ -0.73
Ushbp1-201ENSMUST00000049184 Hbb-b2P02089 147 aa10.52□□□□□ -0.73
Ushbp1-201ENSMUST00000049184 Trav13-4-dv7A0A075B6C2 110 aa10.51□□□□□ -0.73
Ushbp1-201ENSMUST00000049184 GfyJ3KML8 504 aa10.51□□□□□ -0.73
Ushbp1-201ENSMUST00000049184 Kmt2bO08550 2713 aa10.51□□□□□ -0.73
Ushbp1-201ENSMUST00000049184 Prp2P05143 317 aa10.5□□□□□ -0.73
Ushbp1-201ENSMUST00000049184 Prpf8Q99PV0 2335 aaKnown RBP10.5□□□□□ -0.73
Ushbp1-201ENSMUST00000049184 Gm7849D3YX03 116 aa10.5□□□□□ -0.73
Ushbp1-201ENSMUST00000049184 Defa7P50705 93 aa10.49□□□□□ -0.73
Ushbp1-201ENSMUST00000049184 Rps28P62858 69 aaKnown RBP10.48□□□□□ -0.73
Ushbp1-201ENSMUST00000049184 Ntn5Q3UQ22 452 aa10.48□□□□□ -0.73
Ushbp1-201ENSMUST00000049184 Csmd2V9GX34 3611 aa10.48□□□□□ -0.73
Ushbp1-201ENSMUST00000049184 Arid1bE9Q4N7 2244 aa10.48□□□□□ -0.73
Ushbp1-201ENSMUST00000049184 Ighv2-9-1A0A075B697 116 aa10.48□□□□□ -0.73
Ushbp1-201ENSMUST00000049184 CrygdP04342 174 aa10.48□□□□□ -0.73
Ushbp1-201ENSMUST00000049184 Col6a4A2AX52 2309 aa10.47□□□□□ -0.73
Ushbp1-201ENSMUST00000049184 CrygaP04345 174 aa10.47□□□□□ -0.73
Ushbp1-201ENSMUST00000049184 Pip4p1Q3TWL2 284 aa10.47□□□□□ -0.73
Ushbp1-201ENSMUST00000049184 Serp2Q6TAW2 65 aa10.47□□□□□ -0.73
Ushbp1-201ENSMUST00000049184 Defa21Q8C1P2 93 aa10.47□□□□□ -0.73
Ushbp1-201ENSMUST00000049184 Itpr1P11881 2749 aa10.47□□□□□ -0.73
Ushbp1-201ENSMUST00000049184 Ncor2Q9WU42 2472 aaKnown RBP10.46□□□□□ -0.73
Ushbp1-201ENSMUST00000049184 Ighv1-56A0A0A6YXG2 117 aa10.46□□□□□ -0.73
Ushbp1-201ENSMUST00000049184 Cystm1Q8K353 104 aa10.46□□□□□ -0.73
Ushbp1-201ENSMUST00000049184 Ucn2Q99ML8 113 aa10.46□□□□□ -0.73
Ushbp1-201ENSMUST00000049184 Ppp1r32Q148A4 427 aa10.46□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 Defb50Q6TU36 73 aa10.46□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 Sptbn4E9PX29 2561 aa10.45□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 Smlr1J3QMJ4 66 aa10.45□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 P01755 137 aa10.45□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 1810062G17RikG3X8Y2 129 aa10.45□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 Akap6E9Q9K8 2307 aa10.45□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 Ttc28Q80XJ3 2450 aa10.44□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 B230359F08RikA0A0B4J1K3 109 aa10.44□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 Gm3443F7CCV5 94 aa10.44□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 Gm7102J3QQ10 178 aa10.44□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 Tmem258P61166 79 aa10.44□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 Zfand2aQ9JII7 171 aa10.43□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 Ifitm6A0A1B0GS75 124 aa10.43□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 Tmem243B2RVB9 118 aa10.43□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 Naa38Q9D2U5 125 aa10.43□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 Zfp951A0A087WRH0 451 aa10.42□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 Igkv1-99F6XWB2 120 aa10.42□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 Tmem254aP0DN89 123 aa10.42□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 Tmem254bP0DN90 123 aa10.42□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 Tmem254cP0DN91 123 aa10.42□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 MifP34884 115 aaKnown RBP10.42□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 Crlf1Q9JM58 425 aa10.42□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 Trav9d-3A0A075B695 113 aa10.42□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 Trav13n-2A0A0G2JF93 110 aa10.41□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 Samd13D3YUG0 102 aa10.41□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 Smim26Q3V460 107 aa10.41□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 Ighv1-49A0A0A6YWX2 117 aa10.4□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 Gm19935A0A1B0GSF9 52 aa10.4□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 Nop10Q9CQS2 64 aa10.4□□□□□ -0.74
Ushbp1-201ENSMUST00000049184 Trav13d-4A0A0G2JFX3 110 aa10.39□□□□□ -0.75
Ushbp1-201ENSMUST00000049184 Defb42Q8BVB5 75 aa10.39□□□□□ -0.75
Ushbp1-201ENSMUST00000049184 MobpQ9D2P8 170 aa10.39□□□□□ -0.75
Ushbp1-201ENSMUST00000049184 Mrpl52Q9D0Y8 121 aa10.38□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 69.6 ms