RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 SpinklQ8CEK3 90 aa12.83□□□□□ -0.36
Ptpra-201ENSMUST00000028769 Crlf1Q9JM58 425 aa12.83□□□□□ -0.36
Ptpra-201ENSMUST00000028769 Cox8cA6H666 72 aa12.83□□□□□ -0.36
Ptpra-201ENSMUST00000028769 Krtap27-1E9PX37 202 aa12.83□□□□□ -0.36
Ptpra-201ENSMUST00000028769 P01823 113 aa12.83□□□□□ -0.36
Ptpra-201ENSMUST00000028769 P06329 120 aa12.83□□□□□ -0.36
Ptpra-201ENSMUST00000028769 Trav13-4-dv7A0A075B6C2 110 aa12.82□□□□□ -0.36
Ptpra-201ENSMUST00000028769 Igkv4-79A0A075B5L8 119 aa12.82□□□□□ -0.36
Ptpra-201ENSMUST00000028769 1700020N15RikL7MTX3 112 aa12.82□□□□□ -0.36
Ptpra-201ENSMUST00000028769 Tmem101Q91VP7 257 aa12.82□□□□□ -0.36
Ptpra-201ENSMUST00000028769 Shisa2Q8QZV2 295 aa12.81□□□□□ -0.36
Ptpra-201ENSMUST00000028769 Ifitm1Q9D103 106 aa12.81□□□□□ -0.36
Ptpra-201ENSMUST00000028769 Pfn2Q9JJV2 140 aa12.81□□□□□ -0.36
Ptpra-201ENSMUST00000028769 BC048562Q80ZQ7 204 aa12.81□□□□□ -0.36
Ptpra-201ENSMUST00000028769 Trav9d-4A0A0G2JG37 103 aa12.8□□□□□ -0.36
Ptpra-201ENSMUST00000028769 ColqO35348 457 aa12.8□□□□□ -0.36
Ptpra-201ENSMUST00000028769 Ighv1-11A0A0A6YWI9 117 aa12.79□□□□□ -0.36
Ptpra-201ENSMUST00000028769 Lgals4Q8K419 326 aa12.79□□□□□ -0.36
Ptpra-201ENSMUST00000028769 Cox7a1P56392 80 aa12.79□□□□□ -0.36
Ptpra-201ENSMUST00000028769 Srsf12Q8C8K3 266 aa12.79□□□□□ -0.36
Ptpra-201ENSMUST00000028769 Ighv2-6-8A0A0A6YWY9 116 aa12.79□□□□□ -0.36
Ptpra-201ENSMUST00000028769 Gm8439G3UWA7 96 aa12.78□□□□□ -0.36
Ptpra-201ENSMUST00000028769 Ly6hQ9WUC3 139 aa12.78□□□□□ -0.36
Ptpra-201ENSMUST00000028769 Ighv1-49A0A0A6YWX2 117 aa12.77□□□□□ -0.36
Ptpra-201ENSMUST00000028769 Scgb1b24B1B0N6 92 aa12.77□□□□□ -0.36
Ptpra-201ENSMUST00000028769 CdsnQ7TPC1 561 aa12.77□□□□□ -0.36
Ptpra-201ENSMUST00000028769 Defb2P82020 71 aa12.77□□□□□ -0.37
Ptpra-201ENSMUST00000028769 Tomm7Q9D173 55 aa12.77□□□□□ -0.37
Ptpra-201ENSMUST00000028769 Spry2Q9QXV8 315 aa12.77□□□□□ -0.37
Ptpra-201ENSMUST00000028769 Ly6gP35461 111 aa12.76□□□□□ -0.37
Ptpra-201ENSMUST00000028769 4930432M17RikQ3V0W9 174 aa12.76□□□□□ -0.37
Ptpra-201ENSMUST00000028769 Phpt1Q9DAK9 124 aa12.76□□□□□ -0.37
Ptpra-201ENSMUST00000028769 P01745 121 aa12.76□□□□□ -0.37
Ptpra-201ENSMUST00000028769 Gm3233E9Q2H5 230 aa12.75□□□□□ -0.37
Ptpra-201ENSMUST00000028769 Rpl36aP83882 106 aaKnown RBP12.75□□□□□ -0.37
Ptpra-201ENSMUST00000028769 H1fxQ80ZM5 188 aa12.75□□□□□ -0.37
Ptpra-201ENSMUST00000028769 B230359F08RikA0A0B4J1K3 109 aa12.74□□□□□ -0.37
Ptpra-201ENSMUST00000028769 Atp6v0e2Q91XE7 81 aa12.74□□□□□ -0.37
Ptpra-201ENSMUST00000028769 CirbpP60824 172 aaKnown RBP12.72□□□□□ -0.37
Ptpra-201ENSMUST00000028769 Smr3aQ61900 147 aa12.72□□□□□ -0.37
Ptpra-201ENSMUST00000028769 AtrQ9JKK8 2635 aa12.72□□□□□ -0.37
Ptpra-201ENSMUST00000028769 Notch1Q01705 2531 aa12.72□□□□□ -0.37
Ptpra-201ENSMUST00000028769 Ube2wQ8VDW4 151 aa12.72□□□□□ -0.37
Ptpra-201ENSMUST00000028769 Cox17P56394 63 aa12.71□□□□□ -0.37
Ptpra-201ENSMUST00000028769 Q99M08 65 aa12.71□□□□□ -0.37
Ptpra-201ENSMUST00000028769 Sostdc1Q9CQN4 206 aa12.71□□□□□ -0.37
Ptpra-201ENSMUST00000028769 PtprqP0C5E4 2300 aa12.71□□□□□ -0.38
Ptpra-201ENSMUST00000028769 Defb29Q8BGW9 78 aa12.71□□□□□ -0.38
Ptpra-201ENSMUST00000028769 Wdr38Q9D994 303 aa12.71□□□□□ -0.38
Ptpra-201ENSMUST00000028769 Trav13d-4A0A0G2JFX3 110 aa12.7□□□□□ -0.38
Ptpra-201ENSMUST00000028769 Fgfbp3Q1HCM0 245 aa12.7□□□□□ -0.38
Ptpra-201ENSMUST00000028769 Gm9936Q8C864 160 aa12.7□□□□□ -0.38
Ptpra-201ENSMUST00000028769 Lypd5Q9D7Z7 256 aa12.7□□□□□ -0.38
Ptpra-201ENSMUST00000028769 Gm6793B2RXM2 351 aa12.69□□□□□ -0.38
Ptpra-201ENSMUST00000028769 Pglyrp4Q0VB07 374 aa12.69□□□□□ -0.38
Ptpra-201ENSMUST00000028769 CenpwQ3URR0 86 aa12.69□□□□□ -0.38
Ptpra-201ENSMUST00000028769 Ighv1-62-1A0A075B5U3 116 aa12.69□□□□□ -0.38
Ptpra-201ENSMUST00000028769 Defb42Q8BVB5 75 aa12.69□□□□□ -0.38
Ptpra-201ENSMUST00000028769 Cd164l2Q9D6W7 172 aa12.69□□□□□ -0.38
Ptpra-201ENSMUST00000028769 Defa1P11477 93 aa12.68□□□□□ -0.38
Ptpra-201ENSMUST00000028769 Dand5Q76LW6 185 aa12.68□□□□□ -0.38
Ptpra-201ENSMUST00000028769 Nhlrc1Q8BR37 401 aa12.68□□□□□ -0.38
Ptpra-201ENSMUST00000028769 Cox6cQ9CPQ1 76 aa12.68□□□□□ -0.38
Ptpra-201ENSMUST00000028769 SelenowP63300 88 aa12.67□□□□□ -0.38
Ptpra-201ENSMUST00000028769 Ndufa3Q9CQ91 84 aa12.67□□□□□ -0.38
Ptpra-201ENSMUST00000028769 Spata25Q9DA57 226 aa12.67□□□□□ -0.38
Ptpra-201ENSMUST00000028769 Igkv1-35A0A0G2JDE5 120 aa12.66□□□□□ -0.38
Ptpra-201ENSMUST00000028769 Xlr5cQ9JJR2 179 aa12.66□□□□□ -0.38
Ptpra-201ENSMUST00000028769 Plac8l1Q08EJ0 177 aa12.66□□□□□ -0.38
Ptpra-201ENSMUST00000028769 Trav11A0A0B4J1J9 114 aa12.66□□□□□ -0.38
Ptpra-201ENSMUST00000028769 1700011M02RikB1AX35 88 aa12.66□□□□□ -0.38
Ptpra-201ENSMUST00000028769 Gm10647E9Q8X0 124 aa12.65□□□□□ -0.38
Ptpra-201ENSMUST00000028769 Nbeal2Q6ZQA0 2742 aa12.65□□□□□ -0.38
Ptpra-201ENSMUST00000028769 Morn3Q8C5T4 241 aa12.65□□□□□ -0.38
Ptpra-201ENSMUST00000028769 Lst1O08843 95 aa12.64□□□□□ -0.39
Ptpra-201ENSMUST00000028769 March3Q8BRX9 218 aa12.64□□□□□ -0.39
Ptpra-201ENSMUST00000028769 Trav13-1A0A075B644 110 aa12.63□□□□□ -0.39
Ptpra-201ENSMUST00000028769 Cdc42se2Q8BGH7 84 aa12.63□□□□□ -0.39
Ptpra-201ENSMUST00000028769 P01755 137 aa12.62□□□□□ -0.39
Ptpra-201ENSMUST00000028769 Defa20Q45VN2 95 aa12.6□□□□□ -0.39
Ptpra-201ENSMUST00000028769 Gm9922Q8C3P1 144 aa12.6□□□□□ -0.39
Ptpra-201ENSMUST00000028769 Prr13Q9CQJ5 137 aa12.6□□□□□ -0.39
Ptpra-201ENSMUST00000028769 Notch2O35516 2470 aa12.6□□□□□ -0.39
Ptpra-201ENSMUST00000028769 Leap2Q91V13 76 aa12.6□□□□□ -0.39
Ptpra-201ENSMUST00000028769 Ndufa12Q7TMF3 145 aaKnown RBP12.6□□□□□ -0.39
Ptpra-201ENSMUST00000028769 MrapQ9D159 127 aa12.6□□□□□ -0.39
Ptpra-201ENSMUST00000028769 Tfpi2O35536 230 aa12.59□□□□□ -0.39
Ptpra-201ENSMUST00000028769 TeppQ6IMH0 216 aa12.59□□□□□ -0.39
Ptpra-201ENSMUST00000028769 Trav13n-2A0A0G2JF93 110 aa12.59□□□□□ -0.39
Ptpra-201ENSMUST00000028769 Gm17472A0A075B683 117 aa12.58□□□□□ -0.39
Ptpra-201ENSMUST00000028769 Trav3-4A0A075B654 114 aa12.58□□□□□ -0.4
Ptpra-201ENSMUST00000028769 1700010B08RikQ9DAI7 102 aa12.58□□□□□ -0.4
Ptpra-201ENSMUST00000028769 Pla2g1bQ9Z0Y2 146 aa12.58□□□□□ -0.4
Ptpra-201ENSMUST00000028769 FlnbQ80X90 2602 aaKnown RBP12.58□□□□□ -0.4
Ptpra-201ENSMUST00000028769 Gatd1Q8BFQ8 220 aa12.57□□□□□ -0.4
Ptpra-201ENSMUST00000028769 Prss58Q8BW11 241 aa12.57□□□□□ -0.4
Ptpra-201ENSMUST00000028769 MalO09198 153 aa12.57□□□□□ -0.4
Ptpra-201ENSMUST00000028769 Ly6c2P0CW03 131 aa12.57□□□□□ -0.4
Ptpra-201ENSMUST00000028769 Foxc1Q61572 553 aa12.56□□□□□ -0.4
Ptpra-201ENSMUST00000028769 4930442H23RikQ9D5G7 103 aa12.56□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 60.7 ms