RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 Igkv4-91A0A075B5L2 119 aa11.29□□□□□ -0.6
Sdc1-205ENSMUST00000171158 Tcrg-C1A0A075B5Z0 172 aa11.29□□□□□ -0.6
Sdc1-205ENSMUST00000171158 Gm933J3QPC1 141 aa11.29□□□□□ -0.6
Sdc1-205ENSMUST00000171158 Srp14P16254 110 aaKnown RBP11.29□□□□□ -0.6
Sdc1-205ENSMUST00000171158 Gatd1Q8BFQ8 220 aa11.29□□□□□ -0.6
Sdc1-205ENSMUST00000171158 Morn5Q9DAI9 170 aa11.29□□□□□ -0.6
Sdc1-205ENSMUST00000171158 Gm12057A0A087WR21 115 aa11.29□□□□□ -0.6
Sdc1-205ENSMUST00000171158 Q99M08 65 aa11.29□□□□□ -0.6
Sdc1-205ENSMUST00000171158 Igkv4-78A0A0A6YYE5 119 aa11.28□□□□□ -0.6
Sdc1-205ENSMUST00000171158 NpwA0A1L1STR8 176 aa11.28□□□□□ -0.6
Sdc1-205ENSMUST00000171158 Tmem238A9JSM3 176 aa11.28□□□□□ -0.6
Sdc1-205ENSMUST00000171158 Ighv1-72P01751 139 aa11.28□□□□□ -0.6
Sdc1-205ENSMUST00000171158 Trdv5A0A075B661 115 aa11.27□□□□□ -0.6
Sdc1-205ENSMUST00000171158 Gm10322F7D7I4 111 aa11.27□□□□□ -0.6
Sdc1-205ENSMUST00000171158 Rab37Q9JKM7 223 aa11.27□□□□□ -0.6
Sdc1-205ENSMUST00000171158 Dmbt1Q60997 2085 aa11.27□□□□□ -0.6
Sdc1-205ENSMUST00000171158 Defb2P82020 71 aa11.27□□□□□ -0.61
Sdc1-205ENSMUST00000171158 Gm9747Q810H1 104 aa11.26□□□□□ -0.61
Sdc1-205ENSMUST00000171158 Ifitm10Q8BR26 201 aa11.26□□□□□ -0.61
Sdc1-205ENSMUST00000171158 Gm17472A0A075B683 117 aa11.26□□□□□ -0.61
Sdc1-205ENSMUST00000171158 Cox8cA6H666 72 aa11.26□□□□□ -0.61
Sdc1-205ENSMUST00000171158 Gm9887F6RFI0 207 aa11.26□□□□□ -0.61
Sdc1-205ENSMUST00000171158 Sigmar1O55242 223 aa11.26□□□□□ -0.61
Sdc1-205ENSMUST00000171158 Rbmy1bQ60990 380 aa11.26□□□□□ -0.61
Sdc1-205ENSMUST00000171158 Crip2Q9DCT8 208 aaKnown RBP11.26□□□□□ -0.61
Sdc1-205ENSMUST00000171158 Gm7075D3Z497 112 aa11.25□□□□□ -0.61
Sdc1-205ENSMUST00000171158 Mapk1ip1lQ8BH93 242 aa11.25□□□□□ -0.61
Sdc1-205ENSMUST00000171158 Atp6v0e2Q91XE7 81 aa11.25□□□□□ -0.61
Sdc1-205ENSMUST00000171158 Lypd5Q9D7Z7 256 aa11.25□□□□□ -0.61
Sdc1-205ENSMUST00000171158 Eif4ebp1Q60876 117 aa11.25□□□□□ -0.61
Sdc1-205ENSMUST00000171158 Phlda3Q9WV95 125 aa11.25□□□□□ -0.61
Sdc1-205ENSMUST00000171158 Ly6gP35461 111 aa11.24□□□□□ -0.61
Sdc1-205ENSMUST00000171158 Chd6A3KFM7 2711 aa11.23□□□□□ -0.61
Sdc1-205ENSMUST00000171158 Ank2Q8C8R3 3898 aa11.23□□□□□ -0.61
Sdc1-205ENSMUST00000171158 Gm6793B2RXM2 351 aa11.23□□□□□ -0.61
Sdc1-205ENSMUST00000171158 P84751 237 aa11.23□□□□□ -0.61
Sdc1-205ENSMUST00000171158 Defb42Q8BVB5 75 aa11.23□□□□□ -0.61
Sdc1-205ENSMUST00000171158 Notch3Q61982 2318 aa11.23□□□□□ -0.61
Sdc1-205ENSMUST00000171158 PrlhG3UWC3 86 aa11.23□□□□□ -0.61
Sdc1-205ENSMUST00000171158 BatfO35284 125 aa11.22□□□□□ -0.61
Sdc1-205ENSMUST00000171158 Rpl13aP19253 203 aaKnown RBP11.21□□□□□ -0.61
Sdc1-205ENSMUST00000171158 Cd164l2Q9D6W7 172 aa11.21□□□□□ -0.61
Sdc1-205ENSMUST00000171158 BsnO88737 3942 aa11.21□□□□□ -0.61
Sdc1-205ENSMUST00000171158 Rif1Q6PR54 2419 aaKnown RBP11.21□□□□□ -0.61
Sdc1-205ENSMUST00000171158 Gm7849D3YX03 116 aa11.21□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Fxyd5P97808 178 aa11.21□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Defb26Q30KN7 186 aa11.21□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Rmi2Q3UPE3 149 aa11.21□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Trav3-1Q5R1I8 114 aa11.21□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Gm9922Q8C3P1 144 aa11.21□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Fgf23Q9EPC2 251 aa11.21□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Gm20730A0A075B5J6 119 aa11.2□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Rpl32-psP17932 135 aa11.2□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Nf1Q04690 2841 aa11.2□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Trav13d-1A0A075B606 110 aa11.2□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Insl3O09107 122 aa11.2□□□□□ -0.62
Sdc1-205ENSMUST00000171158 4930442H23RikQ9D5G7 103 aa11.2□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Gm9936Q8C864 160 aa11.19□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Pdzd2E9Q1M1 2796 aa11.19□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Trav4-3A0A0B4J1K1 110 aa11.19□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Gm45785A0A1B0GT05 94 aa11.19□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Gm10300Q8C8P7 189 aa11.19□□□□□ -0.62
Sdc1-205ENSMUST00000171158 FlnaQ8BTM8 2647 aaKnown RBP11.18□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Zc2hc1bQ9D534 172 aa11.18□□□□□ -0.62
Sdc1-205ENSMUST00000171158 CubnQ9JLB4 3623 aa11.17□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Gm28269A0A087WSG3 125 aa11.17□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Gm9513B3GLJ6 99 aa11.17□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Rpl36aP83882 106 aaKnown RBP11.17□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Morn3Q8C5T4 241 aa11.17□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Cd99Q8VCN6 175 aa11.17□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Tmem101Q91VP7 257 aa11.17□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Timm17bQ9Z0V7 172 aa11.17□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Defb47Q30KN1 79 aa11.16□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Prelid3aQ8VE85 172 aa11.16□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Trav4d-3A0A075B625 110 aa11.15□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Gm10135F6TEE5 83 aa11.15□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Unc79Q0KK59 2596 aa11.15□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Nop10Q9CQS2 64 aa11.15□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Myo9aQ8C170 2542 aa11.15□□□□□ -0.62
Sdc1-205ENSMUST00000171158 Cdip1Q9DB75 208 aa11.14□□□□□ -0.63
Sdc1-205ENSMUST00000171158 Igkv4-79A0A075B5L8 119 aa11.14□□□□□ -0.63
Sdc1-205ENSMUST00000171158 Glrp1E9Q9S8 174 aa11.13□□□□□ -0.63
Sdc1-205ENSMUST00000171158 Gm10542F6XDR3 90 aa11.13□□□□□ -0.63
Sdc1-205ENSMUST00000171158 P01729 129 aa11.13□□□□□ -0.63
Sdc1-205ENSMUST00000171158 BC048562Q80ZQ7 204 aa11.13□□□□□ -0.63
Sdc1-205ENSMUST00000171158 4930432M17RikQ3V0W9 174 aa11.13□□□□□ -0.63
Sdc1-205ENSMUST00000171158 4930415O20RikQ8CDT5 131 aa11.13□□□□□ -0.63
Sdc1-205ENSMUST00000171158 Chchd7Q8K2Q5 85 aa11.13□□□□□ -0.63
Sdc1-205ENSMUST00000171158 P01823 113 aa11.12□□□□□ -0.63
Sdc1-205ENSMUST00000171158 Lyrm9Q3UN90 78 aa11.12□□□□□ -0.63
Sdc1-205ENSMUST00000171158 Tenm3Q9WTS6 2715 aa11.12□□□□□ -0.63
Sdc1-205ENSMUST00000171158 Cfc1P97766 202 aa11.12□□□□□ -0.63
Sdc1-205ENSMUST00000171158 Plac8l1Q08EJ0 177 aa11.12□□□□□ -0.63
Sdc1-205ENSMUST00000171158 H1fxQ80ZM5 188 aa11.12□□□□□ -0.63
Sdc1-205ENSMUST00000171158 Lgals4Q8K419 326 aa11.12□□□□□ -0.63
Sdc1-205ENSMUST00000171158 Xirp2Q4U4S6 3784 aa11.11□□□□□ -0.63
Sdc1-205ENSMUST00000171158 Col7a1Q63870 2944 aa11.11□□□□□ -0.63
Sdc1-205ENSMUST00000171158 Chd9Q8BYH8 2885 aa11.11□□□□□ -0.63
Sdc1-205ENSMUST00000171158 Rpl35aO55142 110 aa11.1□□□□□ -0.63
Sdc1-205ENSMUST00000171158 Spink1P09036 80 aa11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 40.6 ms