RNA–Protein interactions for RNA: ENSMUST00000108677.1

Usp43-202, Transcript of Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp43, Length 4,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43-202ENSMUST00000108677 ColqO35348 457 aa11.89□□□□□ -0.51
Usp43-202ENSMUST00000108677 Sh2d1aO88890 126 aa11.89□□□□□ -0.51
Usp43-202ENSMUST00000108677 Lyrm9Q3UN90 78 aa11.89□□□□□ -0.51
Usp43-202ENSMUST00000108677 Odf3Q920N1 254 aa11.89□□□□□ -0.51
Usp43-202ENSMUST00000108677 Igkv6-13A0A0G2JGY3 119 aa11.89□□□□□ -0.51
Usp43-202ENSMUST00000108677 Gcn1E9PVA8 2671 aaKnown RBP11.89□□□□□ -0.51
Usp43-202ENSMUST00000108677 1520401A03RikA0A0J9YVH6 598 aa11.88□□□□□ -0.51
Usp43-202ENSMUST00000108677 Gm26602M0QWA4 95 aa11.88□□□□□ -0.51
Usp43-202ENSMUST00000108677 CicQ924A2 2510 aa11.88□□□□□ -0.51
Usp43-202ENSMUST00000108677 Igkv8-34A0A0G2JDU0 121 aa11.88□□□□□ -0.51
Usp43-202ENSMUST00000108677 FcorP0DJI6 106 aa11.88□□□□□ -0.51
Usp43-202ENSMUST00000108677 4930442H23RikQ9D5G7 103 aa11.87□□□□□ -0.51
Usp43-202ENSMUST00000108677 Igkv4-61A0A0G2JH00 117 aa11.87□□□□□ -0.51
Usp43-202ENSMUST00000108677 GfyJ3KML8 504 aa11.87□□□□□ -0.51
Usp43-202ENSMUST00000108677 Trav13d-4A0A0G2JFX3 110 aa11.87□□□□□ -0.51
Usp43-202ENSMUST00000108677 Gm10226O88253 85 aa11.87□□□□□ -0.51
Usp43-202ENSMUST00000108677 Col27a1Q5QNQ9 1845 aa11.86□□□□□ -0.51
Usp43-202ENSMUST00000108677 Trav7-6A0A075B640 112 aa11.86□□□□□ -0.51
Usp43-202ENSMUST00000108677 Trav13-4-dv7A0A075B6C2 110 aa11.86□□□□□ -0.51
Usp43-202ENSMUST00000108677 Znhit3Q9CQK1 151 aa11.86□□□□□ -0.51
Usp43-202ENSMUST00000108677 Mfap4Q9D1H9 257 aa11.86□□□□□ -0.51
Usp43-202ENSMUST00000108677 Lst1O08843 95 aa11.86□□□□□ -0.51
Usp43-202ENSMUST00000108677 Defa25Q5G864 92 aa11.85□□□□□ -0.51
Usp43-202ENSMUST00000108677 Lamtor3O88653 124 aa11.85□□□□□ -0.51
Usp43-202ENSMUST00000108677 Atp5g1Q9CR84 136 aa11.85□□□□□ -0.51
Usp43-202ENSMUST00000108677 Ighv1-75A0A075B5Y2 117 aa11.85□□□□□ -0.51
Usp43-202ENSMUST00000108677 Gata3P23772 443 aa11.85□□□□□ -0.51
Usp43-202ENSMUST00000108677 PrcdQ00LT2 53 aa11.85□□□□□ -0.51
Usp43-202ENSMUST00000108677 B430305J03RikQ8BQQ8 176 aa11.85□□□□□ -0.51
Usp43-202ENSMUST00000108677 Trav13-2A0A075B649 110 aa11.84□□□□□ -0.51
Usp43-202ENSMUST00000108677 Rbmy1bQ60990 380 aa11.84□□□□□ -0.51
Usp43-202ENSMUST00000108677 Morn3Q8C5T4 241 aa11.84□□□□□ -0.51
Usp43-202ENSMUST00000108677 Igkv4-59A0A0B4J1I8 117 aa11.84□□□□□ -0.51
Usp43-202ENSMUST00000108677 MplkipQ9D011 178 aa11.84□□□□□ -0.51
Usp43-202ENSMUST00000108677 PrlhG3UWC3 86 aa11.83□□□□□ -0.52
Usp43-202ENSMUST00000108677 Gm10295Q8CCF3 114 aa11.83□□□□□ -0.52
Usp43-202ENSMUST00000108677 Atp6v0e2Q91XE7 81 aa11.83□□□□□ -0.52
Usp43-202ENSMUST00000108677 B230359F08RikA0A0B4J1K3 109 aa11.83□□□□□ -0.52
Usp43-202ENSMUST00000108677 Defa28D3Z1V9 94 aa11.83□□□□□ -0.52
Usp43-202ENSMUST00000108677 Rnf114Q9ET26 229 aa11.83□□□□□ -0.52
Usp43-202ENSMUST00000108677 Spink10Q8CAC8 162 aa11.81□□□□□ -0.52
Usp43-202ENSMUST00000108677 Trav13-1A0A075B644 110 aa11.81□□□□□ -0.52
Usp43-202ENSMUST00000108677 Cox11Q6P8I6 275 aa11.81□□□□□ -0.52
Usp43-202ENSMUST00000108677 Frem2Q6NVD0 3160 aa11.81□□□□□ -0.52
Usp43-202ENSMUST00000108677 Hcfc1Q61191 2045 aaKnown RBP11.8□□□□□ -0.52
Usp43-202ENSMUST00000108677 Fam222aQ6PGH4 453 aa11.8□□□□□ -0.52
Usp43-202ENSMUST00000108677 Lage3Q9CR70 148 aa11.8□□□□□ -0.52
Usp43-202ENSMUST00000108677 Igkv4-72A0A0B4J1I4 117 aa11.8□□□□□ -0.52
Usp43-202ENSMUST00000108677 Igkv4-53A0A0G2JFC6 119 aa11.8□□□□□ -0.52
Usp43-202ENSMUST00000108677 Sigmar1O55242 223 aa11.8□□□□□ -0.52
Usp43-202ENSMUST00000108677 1700056E22RikF7CNM6 234 aa11.8□□□□□ -0.52
Usp43-202ENSMUST00000108677 Ighv1-11A0A0A6YWI9 117 aa11.79□□□□□ -0.52
Usp43-202ENSMUST00000108677 Fhl2O70433 279 aa11.79□□□□□ -0.52
Usp43-202ENSMUST00000108677 MgaA2AWL7 3003 aaKnown RBP11.79□□□□□ -0.52
Usp43-202ENSMUST00000108677 Hectd1Q69ZR2 2618 aaKnown RBP11.78□□□□□ -0.52
Usp43-202ENSMUST00000108677 Socs3O35718 225 aa11.78□□□□□ -0.52
Usp43-202ENSMUST00000108677 Gm9747Q810H1 104 aa11.78□□□□□ -0.52
Usp43-202ENSMUST00000108677 Q9D8Q6 235 aa11.78□□□□□ -0.52
Usp43-202ENSMUST00000108677 Col6a3E9PWQ3 3284 aa11.78□□□□□ -0.52
Usp43-202ENSMUST00000108677 Xcl1P47993 114 aa11.78□□□□□ -0.52
Usp43-202ENSMUST00000108677 Gm9936Q8C864 160 aa11.77□□□□□ -0.52
Usp43-202ENSMUST00000108677 Trav13n-2A0A0G2JF93 110 aa11.77□□□□□ -0.53
Usp43-202ENSMUST00000108677 Ighv1-72P01751 139 aa11.77□□□□□ -0.53
Usp43-202ENSMUST00000108677 Zfp951A0A087WRH0 451 aa11.76□□□□□ -0.53
Usp43-202ENSMUST00000108677 Gm1968Q3T9I3 115 aa11.76□□□□□ -0.53
Usp43-202ENSMUST00000108677 Ss18l2Q9D174 77 aa11.76□□□□□ -0.53
Usp43-202ENSMUST00000108677 Ighv1-66A0A075B5X5 117 aa11.76□□□□□ -0.53
Usp43-202ENSMUST00000108677 AtrQ9JKK8 2635 aa11.76□□□□□ -0.53
Usp43-202ENSMUST00000108677 Higd2aQ9CQJ1 106 aa11.76□□□□□ -0.53
Usp43-202ENSMUST00000108677 Zc2hc1bQ9D534 172 aa11.76□□□□□ -0.53
Usp43-202ENSMUST00000108677 Ociad2Q9D8W7 154 aa11.76□□□□□ -0.53
Usp43-202ENSMUST00000108677 Gm14137Q8CE97 175 aa11.75□□□□□ -0.53
Usp43-202ENSMUST00000108677 Igkv4-69A0A0B4J1I6 116 aa11.75□□□□□ -0.53
Usp43-202ENSMUST00000108677 Igkv4-54A0A0G2JES9 117 aa11.75□□□□□ -0.53
Usp43-202ENSMUST00000108677 Pglyrp1O88593 182 aa11.75□□□□□ -0.53
Usp43-202ENSMUST00000108677 Sfta2E9PXB6 77 aa11.75□□□□□ -0.53
Usp43-202ENSMUST00000108677 Ighv1-85A0A075B5Y6 117 aa11.74□□□□□ -0.53
Usp43-202ENSMUST00000108677 PkigO70139 76 aa11.74□□□□□ -0.53
Usp43-202ENSMUST00000108677 FrylF8VQ05 3007 aa11.74□□□□□ -0.53
Usp43-202ENSMUST00000108677 PemtQ61907 199 aa11.74□□□□□ -0.53
Usp43-202ENSMUST00000108677 Gphb5Q812B2 130 aa11.74□□□□□ -0.53
Usp43-202ENSMUST00000108677 Igkv1-35A0A0G2JDE5 120 aa11.74□□□□□ -0.53
Usp43-202ENSMUST00000108677 Cyyr1Q8VIH7 165 aa11.74□□□□□ -0.53
Usp43-202ENSMUST00000108677 Celsr3Q91ZI0 3301 aa11.74□□□□□ -0.53
Usp43-202ENSMUST00000108677 Gm10518F6UQQ9 182 aa11.74□□□□□ -0.53
Usp43-202ENSMUST00000108677 Igkv4-79A0A075B5L8 119 aa11.73□□□□□ -0.53
Usp43-202ENSMUST00000108677 Gata1P17679 413 aa11.73□□□□□ -0.53
Usp43-202ENSMUST00000108677 Gm10490F6VBM2 120 aa11.73□□□□□ -0.53
Usp43-202ENSMUST00000108677 Pglyrp4Q0VB07 374 aa11.73□□□□□ -0.53
Usp43-202ENSMUST00000108677 Psmb8P28063 276 aa11.73□□□□□ -0.53
Usp43-202ENSMUST00000108677 Atp5g3P56384 141 aa11.73□□□□□ -0.53
Usp43-202ENSMUST00000108677 CtrlQ9ER05 264 aa11.73□□□□□ -0.53
Usp43-202ENSMUST00000108677 Klk11Q9QYN3 276 aa11.73□□□□□ -0.53
Usp43-202ENSMUST00000108677 Polr2kQ63871 58 aa11.72□□□□□ -0.53
Usp43-202ENSMUST00000108677 Smim26Q3V460 107 aa11.72□□□□□ -0.53
Usp43-202ENSMUST00000108677 Trav14d-3-dv8A0A075B619 120 aa11.72□□□□□ -0.53
Usp43-202ENSMUST00000108677 FasnP19096 2504 aaKnown RBP11.72□□□□□ -0.53
Usp43-202ENSMUST00000108677 Ighv3-3A0A0A6YWL2 116 aa11.71□□□□□ -0.53
Usp43-202ENSMUST00000108677 MifP34884 115 aaKnown RBP11.71□□□□□ -0.53
Usp43-202ENSMUST00000108677 Brca2P97929 3329 aa11.71□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 49.9 ms