RNA–Protein interactions for RNA: ENSMUST00000107938.7

Shank1-203, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Shank1, Length 9,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-203ENSMUST00000107938 Defb13Q8R2I4 64 aa12.2□□□□□ -0.46
Shank1-203ENSMUST00000107938 Notch1Q01705 2531 aa12.2□□□□□ -0.46
Shank1-203ENSMUST00000107938 Trav9-2A0A075B647 113 aa12.2□□□□□ -0.46
Shank1-203ENSMUST00000107938 Trav9n-2A0A0G2JDP3 113 aa12.2□□□□□ -0.46
Shank1-203ENSMUST00000107938 BC107364E9Q5A2 140 aa12.2□□□□□ -0.46
Shank1-203ENSMUST00000107938 Smim1P0C8K7 78 aa12.2□□□□□ -0.46
Shank1-203ENSMUST00000107938 Igkv3-3A0A140T8Q0 119 aa12.19□□□□□ -0.46
Shank1-203ENSMUST00000107938 TeppQ6IMH0 216 aa12.19□□□□□ -0.46
Shank1-203ENSMUST00000107938 Atp6v0e1Q9CQD8 81 aa12.19□□□□□ -0.46
Shank1-203ENSMUST00000107938 Ly6gP35461 111 aa12.19□□□□□ -0.46
Shank1-203ENSMUST00000107938 P01820 115 aa12.18□□□□□ -0.46
Shank1-203ENSMUST00000107938 Igkv8-21A0A140T8P7 120 aa12.18□□□□□ -0.46
Shank1-203ENSMUST00000107938 Rpl39P62892 51 aa12.18□□□□□ -0.46
Shank1-203ENSMUST00000107938 Gm44965A0A0N4SVR3 59 aa12.18□□□□□ -0.46
Shank1-203ENSMUST00000107938 P01649 108 aa12.17□□□□□ -0.46
Shank1-203ENSMUST00000107938 Ndufa4l2Q4FZG9 87 aa12.17□□□□□ -0.46
Shank1-203ENSMUST00000107938 Eif4ebp3Q80VV3 101 aa12.17□□□□□ -0.46
Shank1-203ENSMUST00000107938 Trav9d-3A0A075B695 113 aa12.16□□□□□ -0.46
Shank1-203ENSMUST00000107938 Ighv2-5A0A0A6YY69 116 aa12.16□□□□□ -0.46
Shank1-203ENSMUST00000107938 Gm6899Q3USS0 134 aa12.16□□□□□ -0.46
Shank1-203ENSMUST00000107938 4930518I15RikQ3V2W7 57 aa12.16□□□□□ -0.46
Shank1-203ENSMUST00000107938 Gm12253Q5NC48 229 aa12.16□□□□□ -0.46
Shank1-203ENSMUST00000107938 Cd24P24807 76 aa12.16□□□□□ -0.46
Shank1-203ENSMUST00000107938 4930564D02RikQ9D4S4 103 aa12.16□□□□□ -0.46
Shank1-203ENSMUST00000107938 Rpl28P41105 137 aaKnown RBP12.16□□□□□ -0.46
Shank1-203ENSMUST00000107938 P01630 113 aa12.16□□□□□ -0.46
Shank1-203ENSMUST00000107938 Rita1Q9D1H0 253 aa12.16□□□□□ -0.46
Shank1-203ENSMUST00000107938 Klk13Q8CGR6 276 aa12.15□□□□□ -0.46
Shank1-203ENSMUST00000107938 Ankrd17Q99NH0 2603 aaKnown RBP12.15□□□□□ -0.46
Shank1-203ENSMUST00000107938 Wdr90Q6ZPG2 1874 aa12.15□□□□□ -0.46
Shank1-203ENSMUST00000107938 Ighv1-85A0A075B5Y6 117 aa12.15□□□□□ -0.46
Shank1-203ENSMUST00000107938 Piezo2Q8CD54 2822 aa12.15□□□□□ -0.46
Shank1-203ENSMUST00000107938 Gm9805F6YK59 57 aa12.15□□□□□ -0.46
Shank1-203ENSMUST00000107938 P04940 107 aa12.14□□□□□ -0.47
Shank1-203ENSMUST00000107938 P04941 107 aa12.14□□□□□ -0.47
Shank1-203ENSMUST00000107938 Cr2P19070 1025 aa12.14□□□□□ -0.47
Shank1-203ENSMUST00000107938 AmelxP63277 210 aa12.14□□□□□ -0.47
Shank1-203ENSMUST00000107938 Gm12057A0A087WR21 115 aa12.14□□□□□ -0.47
Shank1-203ENSMUST00000107938 E130114P18RikF6S0S7 154 aa12.13□□□□□ -0.47
Shank1-203ENSMUST00000107938 Sprr2jO70561 109 aa12.13□□□□□ -0.47
Shank1-203ENSMUST00000107938 PrcdQ00LT2 53 aa12.13□□□□□ -0.47
Shank1-203ENSMUST00000107938 Ighv1-82A0A0G2JEU7 117 aa12.13□□□□□ -0.47
Shank1-203ENSMUST00000107938 Gm17324Q8C6J8 137 aa12.13□□□□□ -0.47
Shank1-203ENSMUST00000107938 D730048I06RikQ9CQB8 106 aa12.13□□□□□ -0.47
Shank1-203ENSMUST00000107938 Zc2hc1bQ9D534 172 aa12.13□□□□□ -0.47
Shank1-203ENSMUST00000107938 A0A1Y7VLU2 103 aa12.13□□□□□ -0.47
Shank1-203ENSMUST00000107938 Gm6040Q4QY32 63 aa12.13□□□□□ -0.47
Shank1-203ENSMUST00000107938 Cd164l2Q9D6W7 172 aa12.12□□□□□ -0.47
Shank1-203ENSMUST00000107938 Coa6Q8BGD8 79 aa12.12□□□□□ -0.47
Shank1-203ENSMUST00000107938 SetxA2AKX3 2646 aa12.12□□□□□ -0.47
Shank1-203ENSMUST00000107938 Rspo4Q8BJ73 228 aa12.12□□□□□ -0.47
Shank1-203ENSMUST00000107938 Znf706Q9D115 76 aaKnown RBP12.12□□□□□ -0.47
Shank1-203ENSMUST00000107938 Dkk4Q8VEJ3 221 aa12.12□□□□□ -0.47
Shank1-203ENSMUST00000107938 Defb33Q30KN3 62 aa12.12□□□□□ -0.47
Shank1-203ENSMUST00000107938 Nop10Q9CQS2 64 aa12.11□□□□□ -0.47
Shank1-203ENSMUST00000107938 Ighv1-75A0A075B5Y2 117 aa12.11□□□□□ -0.47
Shank1-203ENSMUST00000107938 Ighv1-74A0A0G2JGK2 117 aa12.11□□□□□ -0.47
Shank1-203ENSMUST00000107938 Gm19345G3UYD9 124 aa12.11□□□□□ -0.47
Shank1-203ENSMUST00000107938 Ighv1-4A0A075B5T4 117 aa12.11□□□□□ -0.47
Shank1-203ENSMUST00000107938 Gm5629P06327 117 aa12.11□□□□□ -0.47
Shank1-203ENSMUST00000107938 Q80X32 188 aaKnown RBP12.11□□□□□ -0.47
Shank1-203ENSMUST00000107938 Pate2Q3UW31 111 aa12.1□□□□□ -0.47
Shank1-203ENSMUST00000107938 P04946 108 aa12.1□□□□□ -0.47
Shank1-203ENSMUST00000107938 Csrp1P97315 193 aaKnown RBP12.1□□□□□ -0.47
Shank1-203ENSMUST00000107938 P04942 107 aa12.09□□□□□ -0.47
Shank1-203ENSMUST00000107938 Trav13n-2A0A0G2JF93 110 aa12.09□□□□□ -0.47
Shank1-203ENSMUST00000107938 Igkv1-88A0A140T8N1 120 aa12.09□□□□□ -0.47
Shank1-203ENSMUST00000107938 Fn1P11276 2477 aaKnown RBP12.09□□□□□ -0.47
Shank1-203ENSMUST00000107938 RetnlbQ99P86 105 aa12.09□□□□□ -0.47
Shank1-203ENSMUST00000107938 Col8a2P25318 699 aa12.08□□□□□ -0.48
Shank1-203ENSMUST00000107938 Plac8l1Q08EJ0 177 aa12.08□□□□□ -0.48
Shank1-203ENSMUST00000107938 Ntn5Q3UQ22 452 aa12.08□□□□□ -0.48
Shank1-203ENSMUST00000107938 Q9D131 166 aa12.08□□□□□ -0.48
Shank1-203ENSMUST00000107938 Fgf23Q9EPC2 251 aa12.08□□□□□ -0.48
Shank1-203ENSMUST00000107938 Pip4p1Q3TWL2 284 aa12.08□□□□□ -0.48
Shank1-203ENSMUST00000107938 Hectd1Q69ZR2 2618 aaKnown RBP12.08□□□□□ -0.48
Shank1-203ENSMUST00000107938 ScxQ64124 207 aa12.07□□□□□ -0.48
Shank1-203ENSMUST00000107938 3110021N24RikJ3QMN2 152 aa12.07□□□□□ -0.48
Shank1-203ENSMUST00000107938 Csrp2P97314 193 aaKnown RBP12.07□□□□□ -0.48
Shank1-203ENSMUST00000107938 Col5a1O88207 1838 aa12.07□□□□□ -0.48
Shank1-203ENSMUST00000107938 Gm10570F6VB42 170 aa12.07□□□□□ -0.48
Shank1-203ENSMUST00000107938 Prr3Q811B5 190 aaKnown RBP12.07□□□□□ -0.48
Shank1-203ENSMUST00000107938 Gm12216A0A1W2P827 62 aa12.06□□□□□ -0.48
Shank1-203ENSMUST00000107938 Igkv1-117A0A140T8M0 119 aa12.06□□□□□ -0.48
Shank1-203ENSMUST00000107938 MsmpB1AWI6 139 aa12.06□□□□□ -0.48
Shank1-203ENSMUST00000107938 Fam19a4Q7TPG5 135 aa12.06□□□□□ -0.48
Shank1-203ENSMUST00000107938 Mp68P56379 58 aa12.06□□□□□ -0.48
Shank1-203ENSMUST00000107938 Abca12E9Q876 2595 aa12.06□□□□□ -0.48
Shank1-203ENSMUST00000107938 Gm5153P01627 120 aa12.05□□□□□ -0.48
Shank1-203ENSMUST00000107938 NpbQ8K4P1 119 aa12.05□□□□□ -0.48
Shank1-203ENSMUST00000107938 P18532 116 aa12.05□□□□□ -0.48
Shank1-203ENSMUST00000107938 Gm10322F7D7I4 111 aa12.05□□□□□ -0.48
Shank1-203ENSMUST00000107938 P01750 117 aa12.05□□□□□ -0.48
Shank1-203ENSMUST00000107938 CrygeQ03740 174 aa12.05□□□□□ -0.48
Shank1-203ENSMUST00000107938 CrygfQ9CXV3 174 aa12.05□□□□□ -0.48
Shank1-203ENSMUST00000107938 Gm20538F6Z9R1 75 aa12.05□□□□□ -0.48
Shank1-203ENSMUST00000107938 Ighv10-3A0A075B5T6 119 aa12.05□□□□□ -0.48
Shank1-203ENSMUST00000107938 Gm16503Q8C6M9 103 aa12.05□□□□□ -0.48
Shank1-203ENSMUST00000107938 Rnf144bQ8BKD6 301 aa12.04□□□□□ -0.48
Shank1-203ENSMUST00000107938 Ighv1-72P01751 139 aa12.04□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 48.7 ms