RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 1810032O08RikE9PZV8 113 aa10.77□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 Ly6hQ9WUC3 139 aa10.77□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 Ighv2-7A0A075B5Q8 116 aa10.76□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 Trav9-2A0A075B647 113 aa10.76□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 Trav9-4A0A0B4J1K2 113 aa10.76□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 Gm10509O88255 85 aa10.76□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 4930432M17RikQ3V0W9 174 aa10.76□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 1700010B08RikQ9DAI7 102 aa10.76□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 Ash1lQ99MY8 2958 aa10.76□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 Trav14d-3-dv8A0A075B619 120 aa10.75□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 B230217C12RikE9Q3Z1 139 aa10.75□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 Ighv1-61P01749 117 aa10.75□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 Cox17P56394 63 aa10.75□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 Synj2bpQ9D6K5 145 aa10.75□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 Svep1A2AVA0 3567 aa10.75□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 Cmya5Q70KF4 3739 aa10.75□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 Defa25Q5G864 92 aa10.75□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 Prss58Q8BW11 241 aa10.75□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 Igkv4-78A0A0A6YYE5 119 aa10.74□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 Fgfbp3Q1HCM0 245 aa10.74□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 Defb33Q30KN3 62 aa10.74□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 Znf414Q9DCK4 299 aa10.74□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 PlaurP35456 327 aa10.73□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 Zfp292Q9Z2U2 2698 aa10.73□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 Armcx4E9PWM3 2356 aa10.73□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 Gm17472A0A075B683 117 aa10.73□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 Pglyrp4Q0VB07 374 aa10.73□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 Rnf183Q8QZS5 190 aa10.73□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 P01823 113 aa10.72□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 Csdc2Q91YQ3 154 aa10.72□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 Dido1Q8C9B9 2256 aaKnown RBP10.71□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 Sostdc1Q9CQN4 206 aa10.71□□□□□ -0.69
Ushbp1-201ENSMUST00000049184 Trav13n-1A0A0G2JEU8 110 aa10.7□□□□□ -0.7
Ushbp1-201ENSMUST00000049184 CdsnQ7TPC1 561 aa10.7□□□□□ -0.7
Ushbp1-201ENSMUST00000049184 AngP21570 145 aa10.7□□□□□ -0.7
Ushbp1-201ENSMUST00000049184 ScxQ64124 207 aa10.7□□□□□ -0.7
Ushbp1-201ENSMUST00000049184 Ighv5-9-1A0A0A6YVS4 126 aa10.69□□□□□ -0.7
Ushbp1-201ENSMUST00000049184 Igkv4-68A0A0B4J1I7 117 aa10.69□□□□□ -0.7
Ushbp1-201ENSMUST00000049184 Gm5089A1L3C8 106 aa10.69□□□□□ -0.7
Ushbp1-201ENSMUST00000049184 SelenowP63300 88 aa10.69□□□□□ -0.7
Ushbp1-201ENSMUST00000049184 Dynlrb2Q9DAJ5 96 aa10.69□□□□□ -0.7
Ushbp1-201ENSMUST00000049184 Gm10542F6XDR3 90 aa10.69□□□□□ -0.7
Ushbp1-201ENSMUST00000049184 Cops9Q3U898 57 aa10.69□□□□□ -0.7
Ushbp1-201ENSMUST00000049184 Lst1O08843 95 aa10.68□□□□□ -0.7
Ushbp1-201ENSMUST00000049184 Atp5g1Q9CR84 136 aa10.68□□□□□ -0.7
Ushbp1-201ENSMUST00000049184 Avpi1Q9D7H4 142 aa10.68□□□□□ -0.7
Ushbp1-201ENSMUST00000049184 Muc4Q8JZM8 3443 aa10.68□□□□□ -0.7
Ushbp1-201ENSMUST00000049184 Trav11A0A0B4J1J9 114 aa10.68□□□□□ -0.7
Ushbp1-201ENSMUST00000049184 5730596B20RikQ8BQ08 205 aa10.68□□□□□ -0.7
Ushbp1-201ENSMUST00000049184 Spata25Q9DA57 226 aa10.68□□□□□ -0.7
Ushbp1-201ENSMUST00000049184 Fxyd5P97808 178 aa10.67□□□□□ -0.7
Ushbp1-201ENSMUST00000049184 PemtQ61907 199 aa10.67□□□□□ -0.7
Ushbp1-201ENSMUST00000049184 Qrich2A0A140LIY9 2337 aa10.67□□□□□ -0.7
Ushbp1-201ENSMUST00000049184 Gm9513B3GLJ6 99 aa10.66□□□□□ -0.7
Ushbp1-201ENSMUST00000049184 Lce6aD3YV94 81 aa10.66□□□□□ -0.7
Ushbp1-201ENSMUST00000049184 Shisa2Q8QZV2 295 aa10.66□□□□□ -0.7
Ushbp1-201ENSMUST00000049184 Igf1P05017 153 aa10.66□□□□□ -0.7
Ushbp1-201ENSMUST00000049184 Xcl1P47993 114 aa10.66□□□□□ -0.7
Ushbp1-201ENSMUST00000049184 Ang3P97802 145 aa10.66□□□□□ -0.7
Ushbp1-201ENSMUST00000049184 D130052B06RikQ3UW13 202 aa10.66□□□□□ -0.7
Ushbp1-201ENSMUST00000049184 A930009A15RikG3UYI6 118 aa10.65□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 Sptan1P16546 2472 aaKnown RBP10.64□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 Ighv1-62-1A0A075B5U3 116 aa10.64□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 4930546C10RikE9Q4Y3 121 aa10.64□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 MalO09198 153 aa10.64□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 Gm10577Q3UDV9 132 aa10.64□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 Spg11Q3UHA3 2430 aa10.63□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 1700011M02RikB1AX35 88 aa10.63□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 Fhl2O70433 279 aa10.63□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 Igkv4-79A0A075B5L8 119 aa10.63□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 Trav9n-2A0A0G2JDP3 113 aa10.63□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 Pla2g2cP48076 150 aa10.63□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 Gm3618D3Z4P5 127 aa10.62□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 Reg3gO09049 174 aa10.62□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 Lage3Q9CR70 148 aa10.62□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 Gm2916Q9D9B9 127 aa10.62□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 Sec16aA2AIX1 2377 aa10.62□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 Gm815Q3UWS2 115 aa10.62□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 CenpeQ6RT24 2474 aaKnown RBP10.61□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 Gm20726G3UX18 150 aa10.6□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 PspnO70300 156 aa10.6□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 P04219 140 aa10.6□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 Gm10549Q3URY4 149 aa10.6□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 P01738 130 aa10.6□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 Cox6b1P56391 86 aaKnown RBP10.6□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 Rnf152Q8BG47 203 aa10.59□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 4930470P17RikQ9D542 155 aa10.59□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 Trav9d-4A0A0G2JG37 103 aa10.59□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 Rpl28P41105 137 aaKnown RBP10.59□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 Vmo1Q5SXG7 201 aa10.59□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 4930524J08RikQ9CUJ5 163 aa10.59□□□□□ -0.71
Ushbp1-201ENSMUST00000049184 Gm9925F6T2U3 160 aa10.58□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 P01786 117 aa10.58□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Ighv1-58A0A075B5W9 117 aa10.58□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Hist1h4aP62806 103 aaKnown RBP10.58□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Fam110dQ80X91 271 aa10.58□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Klk11Q9QYN3 276 aa10.58□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 7530416G11RikJ3QJX6 159 aa10.57□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Sh2d1aO88890 126 aa10.57□□□□□ -0.72
Ushbp1-201ENSMUST00000049184 Acyp1P56376 99 aa10.57□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 49.8 ms