RNA–Protein interactions for RNA: ENSMUST00000028288.4

Notch1-201, Transcript of Neurogenic locus notch homolog protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Notch1, Length 9,488 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1-201ENSMUST00000028288 Defb12Q8K4N3 78 aa10.28□□□□□ -0.76
Notch1-201ENSMUST00000028288 Gm17577J3QNF7 156 aa10.28□□□□□ -0.76
Notch1-201ENSMUST00000028288 Sh2d1aO88890 126 aa10.28□□□□□ -0.76
Notch1-201ENSMUST00000028288 Reg3bP35230 175 aa10.28□□□□□ -0.76
Notch1-201ENSMUST00000028288 PolqQ8CGS6 2544 aa10.28□□□□□ -0.76
Notch1-201ENSMUST00000028288 Rnase1P00683 149 aa10.28□□□□□ -0.76
Notch1-201ENSMUST00000028288 Ndufa4l2Q4FZG9 87 aa10.28□□□□□ -0.76
Notch1-201ENSMUST00000028288 Rpl39lQ9CQD0 51 aa10.28□□□□□ -0.76
Notch1-201ENSMUST00000028288 Piezo1E2JF22 2547 aa10.27□□□□□ -0.76
Notch1-201ENSMUST00000028288 Nsun4C4P6S0 806 aaKnown RBP10.27□□□□□ -0.76
Notch1-201ENSMUST00000028288 Ttc28Q80XJ3 2450 aa10.27□□□□□ -0.76
Notch1-201ENSMUST00000028288 Gm3618D3Z4P5 127 aa10.27□□□□□ -0.76
Notch1-201ENSMUST00000028288 Klk5Q9D140 293 aa10.27□□□□□ -0.77
Notch1-201ENSMUST00000028288 Col27a1Q5QNQ9 1845 aa10.27□□□□□ -0.77
Notch1-201ENSMUST00000028288 Pla2g2aP31482 146 aa10.27□□□□□ -0.77
Notch1-201ENSMUST00000028288 Atp5g3P56384 141 aa10.27□□□□□ -0.77
Notch1-201ENSMUST00000028288 Gm37389A0A0A6YW05 95 aa10.27□□□□□ -0.77
Notch1-201ENSMUST00000028288 Tmem223Q9CQE2 199 aaKnown RBP10.27□□□□□ -0.77
Notch1-201ENSMUST00000028288 Smim20D3Z7Q2 69 aa10.26□□□□□ -0.77
Notch1-201ENSMUST00000028288 Zfand3Q497H0 227 aa10.26□□□□□ -0.77
Notch1-201ENSMUST00000028288 Ighv2-6A0A075B6A7 116 aa10.26□□□□□ -0.77
Notch1-201ENSMUST00000028288 SvipQ3UZP4 77 aa10.26□□□□□ -0.77
Notch1-201ENSMUST00000028288 1700012A03RikQ9DAF1 130 aa10.26□□□□□ -0.77
Notch1-201ENSMUST00000028288 Ighv8-12A0A0G2JDE1 119 aa10.26□□□□□ -0.77
Notch1-201ENSMUST00000028288 Prop1P97458 223 aa10.26□□□□□ -0.77
Notch1-201ENSMUST00000028288 P01820 115 aa10.26□□□□□ -0.77
Notch1-201ENSMUST00000028288 Fxyd5P97808 178 aa10.26□□□□□ -0.77
Notch1-201ENSMUST00000028288 Higd2aQ9CQJ1 106 aa10.26□□□□□ -0.77
Notch1-201ENSMUST00000028288 Gm14137Q8CE97 175 aa10.25□□□□□ -0.77
Notch1-201ENSMUST00000028288 B9d2Q3UK10 175 aa10.25□□□□□ -0.77
Notch1-201ENSMUST00000028288 Ormdl1Q921I0 153 aa10.24□□□□□ -0.77
Notch1-201ENSMUST00000028288 P01747 120 aa10.24□□□□□ -0.77
Notch1-201ENSMUST00000028288 Gm10735Q3US96 136 aa10.24□□□□□ -0.77
Notch1-201ENSMUST00000028288 Eif4ebp1Q60876 117 aa10.24□□□□□ -0.77
Notch1-201ENSMUST00000028288 Gm12353A2AGJ4 60 aa10.24□□□□□ -0.77
Notch1-201ENSMUST00000028288 Tmem213Q08EA8 116 aa10.24□□□□□ -0.77
Notch1-201ENSMUST00000028288 Igf1P05017 153 aa10.23□□□□□ -0.77
Notch1-201ENSMUST00000028288 Ighv1-11A0A0A6YWI9 117 aa10.23□□□□□ -0.77
Notch1-201ENSMUST00000028288 Tmem254aP0DN89 123 aa10.22□□□□□ -0.77
Notch1-201ENSMUST00000028288 Tmem254bP0DN90 123 aa10.22□□□□□ -0.77
Notch1-201ENSMUST00000028288 Tmem254cP0DN91 123 aa10.22□□□□□ -0.77
Notch1-201ENSMUST00000028288 CrygcQ61597 174 aa10.22□□□□□ -0.77
Notch1-201ENSMUST00000028288 PpdpfQ9CR37 115 aa10.22□□□□□ -0.77
Notch1-201ENSMUST00000028288 Ube2aQ9Z255 152 aa10.22□□□□□ -0.77
Notch1-201ENSMUST00000028288 Ighv1-75A0A075B5Y2 117 aa10.22□□□□□ -0.77
Notch1-201ENSMUST00000028288 Vpreb2P13373 142 aa10.22□□□□□ -0.77
Notch1-201ENSMUST00000028288 Ighv1-85A0A075B5Y6 117 aa10.21□□□□□ -0.77
Notch1-201ENSMUST00000028288 Ypel4Q65Z93 127 aa10.21□□□□□ -0.77
Notch1-201ENSMUST00000028288 Tfpi2O35536 230 aa10.21□□□□□ -0.77
Notch1-201ENSMUST00000028288 Cfc1P97766 202 aa10.21□□□□□ -0.78
Notch1-201ENSMUST00000028288 PtprqP0C5E4 2300 aa10.2□□□□□ -0.78
Notch1-201ENSMUST00000028288 P84751 237 aa10.2□□□□□ -0.78
Notch1-201ENSMUST00000028288 Map6d1Q14BB9 191 aa10.2□□□□□ -0.78
Notch1-201ENSMUST00000028288 Gm5629P06327 117 aa10.19□□□□□ -0.78
Notch1-201ENSMUST00000028288 Sprr3O09116 238 aa10.19□□□□□ -0.78
Notch1-201ENSMUST00000028288 P18527 97 aa10.19□□□□□ -0.78
Notch1-201ENSMUST00000028288 Usp9xP70398 2559 aaKnown RBP10.19□□□□□ -0.78
Notch1-201ENSMUST00000028288 Pde6gP09174 87 aa10.19□□□□□ -0.78
Notch1-201ENSMUST00000028288 Igkv3-4A0A140T8Q4 119 aa10.19□□□□□ -0.78
Notch1-201ENSMUST00000028288 AvpP35455 168 aa10.18□□□□□ -0.78
Notch1-201ENSMUST00000028288 Notch2O35516 2470 aa10.18□□□□□ -0.78
Notch1-201ENSMUST00000028288 Gphb5Q812B2 130 aa10.17□□□□□ -0.78
Notch1-201ENSMUST00000028288 Odf3Q920N1 254 aa10.17□□□□□ -0.78
Notch1-201ENSMUST00000028288 Tcte2E9PY37 120 aa10.17□□□□□ -0.78
Notch1-201ENSMUST00000028288 SptssbQ925E8 76 aa10.17□□□□□ -0.78
Notch1-201ENSMUST00000028288 Igkv3-10A0A0G2JGN0 119 aa10.17□□□□□ -0.78
Notch1-201ENSMUST00000028288 Naa38Q9D2U5 125 aa10.17□□□□□ -0.78
Notch1-201ENSMUST00000028288 Q9DAQ5 155 aa10.17□□□□□ -0.78
Notch1-201ENSMUST00000028288 Ighv1-82A0A0G2JEU7 117 aa10.16□□□□□ -0.78
Notch1-201ENSMUST00000028288 P01729 129 aa10.16□□□□□ -0.78
Notch1-201ENSMUST00000028288 Ptpn13Q64512 2453 aa10.16□□□□□ -0.78
Notch1-201ENSMUST00000028288 Gm5878E9PUB3 99 aa10.16□□□□□ -0.78
Notch1-201ENSMUST00000028288 Rnf152Q8BG47 203 aa10.16□□□□□ -0.78
Notch1-201ENSMUST00000028288 NrgnP60761 78 aa10.15□□□□□ -0.78
Notch1-201ENSMUST00000028288 Setd2E9Q5F9 2537 aa10.15□□□□□ -0.78
Notch1-201ENSMUST00000028288 Vpreb3D3Z6J4 130 aa10.15□□□□□ -0.78
Notch1-201ENSMUST00000028288 Hivep2Q3UHF7 2430 aa10.14□□□□□ -0.79
Notch1-201ENSMUST00000028288 Gm28539A0A087WSL9 92 aa10.14□□□□□ -0.79
Notch1-201ENSMUST00000028288 Gm17521F6QAC8 156 aa10.14□□□□□ -0.79
Notch1-201ENSMUST00000028288 P01659 112 aa10.14□□□□□ -0.79
Notch1-201ENSMUST00000028288 FcorP0DJI6 106 aa10.14□□□□□ -0.79
Notch1-201ENSMUST00000028288 Rnf185Q91YT2 192 aa10.14□□□□□ -0.79
Notch1-201ENSMUST00000028288 Q9CX25 107 aa10.14□□□□□ -0.79
Notch1-201ENSMUST00000028288 Igkv4-92A0A0B4J1I2 117 aa10.13□□□□□ -0.79
Notch1-201ENSMUST00000028288 TshbP12656 138 aa10.12□□□□□ -0.79
Notch1-201ENSMUST00000028288 EnhoQ8K1D8 76 aa10.12□□□□□ -0.79
Notch1-201ENSMUST00000028288 Ufsp1Q9CZP0 217 aa10.11□□□□□ -0.79
Notch1-201ENSMUST00000028288 Ly6hQ9WUC3 139 aa10.11□□□□□ -0.79
Notch1-201ENSMUST00000028288 Ighv8-5A0A0A6YY60 119 aa10.11□□□□□ -0.79
Notch1-201ENSMUST00000028288 Klk9Q32M27 251 aa10.11□□□□□ -0.79
Notch1-201ENSMUST00000028288 Plac8l1Q08EJ0 177 aa10.11□□□□□ -0.79
Notch1-201ENSMUST00000028288 Fam19a1Q7TPG8 133 aa10.11□□□□□ -0.79
Notch1-201ENSMUST00000028288 TrrapQ80YV3 2565 aaKnown RBP10.11□□□□□ -0.79
Notch1-201ENSMUST00000028288 Zfp462B1AWL2 2495 aaKnown RBP10.11□□□□□ -0.79
Notch1-201ENSMUST00000028288 Spry2Q9QXV8 315 aa10.11□□□□□ -0.79
Notch1-201ENSMUST00000028288 Ndufc1Q9CQY9 76 aa10.1□□□□□ -0.79
Notch1-201ENSMUST00000028288 Ighv1-63A0A075B5X2 117 aa10.1□□□□□ -0.79
Notch1-201ENSMUST00000028288 9530003J23RikQ8BM26 151 aa10.1□□□□□ -0.79
Notch1-201ENSMUST00000028288 Gm12689Q8BQU9 117 aa10.1□□□□□ -0.79
Notch1-201ENSMUST00000028288 Prr15lQ8JZM2 100 aa10.1□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 11.1 ms