RNA–Protein interactions for RNA: ENSMUST00000100942.8

Vamp1-203, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Vamp1, Length 3,011 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-203ENSMUST00000100942 Atp5lQ9CPQ8 103 aa9.15□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Igkv4-69A0A0B4J1I6 116 aa9.15□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Sdhaf1Q3U276 118 aa9.15□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Ndufa4Q62425 82 aaKnown RBP9.15□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Srsf12Q8C8K3 266 aa9.15□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Mrpl36Q99N90 102 aa9.15□□□□□ -0.94
Vamp1-203ENSMUST00000100942 RhohQ9D3G9 191 aa9.15□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Krtap26-1Q9D7N2 215 aa9.15□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Col7a1Q63870 2944 aa9.15□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Usp9xP70398 2559 aaKnown RBP9.15□□□□□ -0.94
Vamp1-203ENSMUST00000100942 Rpl39P62892 51 aa9.15□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Q9DAQ5 155 aa9.15□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Gm26661M0QWV4 156 aa9.14□□□□□ -0.95
Vamp1-203ENSMUST00000100942 CckP09240 115 aa9.14□□□□□ -0.95
Vamp1-203ENSMUST00000100942 March3Q8BRX9 218 aa9.14□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Gm35549A0A0N4SUS7 141 aa9.14□□□□□ -0.95
Vamp1-203ENSMUST00000100942 NpwA0A1L1STR8 176 aa9.13□□□□□ -0.95
Vamp1-203ENSMUST00000100942 4930447F04RikA2AFR2 126 aa9.13□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Dmrt3Q80WT2 476 aa9.13□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Phlda3Q9WV95 125 aa9.13□□□□□ -0.95
Vamp1-203ENSMUST00000100942 SrarpQ3ULG3 163 aa9.13□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Spink10Q8CAC8 162 aa9.13□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Spag11Q8K4N2 71 aa9.13□□□□□ -0.95
Vamp1-203ENSMUST00000100942 P01750 117 aa9.13□□□□□ -0.95
Vamp1-203ENSMUST00000100942 3110018I06RikQ9CXS0 120 aa9.13□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Mrps12O35680 139 aa9.12□□□□□ -0.95
Vamp1-203ENSMUST00000100942 P01811 117 aa9.12□□□□□ -0.95
Vamp1-203ENSMUST00000100942 TshbP12656 138 aa9.12□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Sumo2P61957 95 aaKnown RBP9.12□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Ss18Q62280 418 aa9.12□□□□□ -0.95
Vamp1-203ENSMUST00000100942 BC106179Q8C9L1 186 aa9.12□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Triap1Q9D8Z2 76 aa9.12□□□□□ -0.95
Vamp1-203ENSMUST00000100942 LrbaQ9ESE1 2856 aa9.12□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Trbv17A0A140T8P8 114 aa9.12□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Gm10553J3QPF1 123 aa9.12□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Ccl19O70460 108 aa9.12□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Ang3P97802 145 aa9.12□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Hoxd3P09027 433 aa9.11□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Ighv1-64A0A075B5X3 117 aa9.11□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Gm10251J3QPM5 127 aa9.11□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Defb47Q30KN1 79 aa9.11□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Olfr313Q5NC55 308 aa9.11□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Wfdc15aQ8BH89 80 aa9.11□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Rpl36-ps4A0A140T8U4 117 aa9.1□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Gm933J3QPC1 141 aa9.1□□□□□ -0.95
Vamp1-203ENSMUST00000100942 P01747 120 aa9.1□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Defb2P82020 71 aa9.1□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Tmem14cQ9CQN6 114 aa9.1□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Avpi1Q9D7H4 142 aa9.1□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Gm5089A1L3C8 106 aa9.1□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Csdc2Q91YQ3 154 aa9.1□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Wdr38Q9D994 303 aa9.1□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Zfyve26Q5DU37 2529 aa9.1□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Ighv1-52A0A0A6YXC3 117 aa9.1□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Igfn1Q3KNY0 2849 aa9.09□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Rpl32-psP17932 135 aa9.09□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Foxi2Q3I5G5 311 aa9.09□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Gcn1E9PVA8 2671 aaKnown RBP9.09□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Ank2Q8C8R3 3898 aa9.09□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Trav3-4A0A075B654 114 aa9.09□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Gm9513B3GLJ6 99 aa9.09□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Morn5Q9DAI9 170 aa9.09□□□□□ -0.95
Vamp1-203ENSMUST00000100942 Ighv1-50A0A075B5W1 117 aa9.08□□□□□ -0.96
Vamp1-203ENSMUST00000100942 C920008G01RikA0A0B4J1N1 112 aa9.08□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Bahcc1Q3UHR0 2643 aa9.08□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Ighv12-3A0A075B5T1 117 aa9.08□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Gm10135F6TEE5 83 aa9.08□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Crip2Q9DCT8 208 aaKnown RBP9.08□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Ighv1-12A0A0A6YXJ9 117 aa9.07□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Gm5629P06327 117 aa9.07□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Tex26Q0VB26 296 aa9.07□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Trav7d-3Q5R1I1 112 aa9.07□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Ube2wQ8VDW4 151 aa9.07□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Ighv1-75A0A075B5Y2 117 aa9.07□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Ighv3-3A0A0A6YWL2 116 aa9.07□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Gm21748Q3UE70 102 aa9.07□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Gm6793B2RXM2 351 aa9.07□□□□□ -0.96
Vamp1-203ENSMUST00000100942 LhbO09108 141 aa9.07□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Q5BN45 167 aa9.07□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Ube2e2Q91W82 201 aa9.07□□□□□ -0.96
Vamp1-203ENSMUST00000100942 PmvkQ9D1G2 192 aa9.07□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Ankrd17Q99NH0 2603 aaKnown RBP9.06□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Foxc1Q61572 553 aa9.06□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Ankrd39Q9D2X0 183 aa9.06□□□□□ -0.96
Vamp1-203ENSMUST00000100942 CubnQ9JLB4 3623 aa9.06□□□□□ -0.96
Vamp1-203ENSMUST00000100942 BsnO88737 3942 aa9.06□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Ifitm10Q8BR26 201 aa9.05□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Gm11020F6ZGD5 61 aa9.05□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Rbmy1bQ60990 380 aa9.05□□□□□ -0.96
Vamp1-203ENSMUST00000100942 A930009A15RikG3UYI6 118 aa9.05□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Smlr1J3QMJ4 66 aa9.05□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Gm4861Q8C5A4 106 aa9.05□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Mast4Q811L6 2618 aa9.04□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Wnk1P83741 2377 aa9.04□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Trav4d-3A0A075B625 110 aa9.04□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Gm2564F6Z9S8 108 aa9.04□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Apoc4Q61268 124 aa9.04□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Pdzd2E9Q1M1 2796 aa9.04□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Ighv2-7A0A075B5Q8 116 aa9.03□□□□□ -0.96
Vamp1-203ENSMUST00000100942 Ndufb4Q9CQC7 129 aa9.03□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 93 ms