RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 P01745 121 aa17.59■□□□□ 0.41
Sh3rf1-201ENSMUST00000034060 Trav13-2A0A075B649 110 aa17.59■□□□□ 0.41
Sh3rf1-201ENSMUST00000034060 Tln2Q71LX4 2375 aa17.59■□□□□ 0.41
Sh3rf1-201ENSMUST00000034060 TprF6ZDS4 2431 aaKnown RBP17.58■□□□□ 0.41
Sh3rf1-201ENSMUST00000034060 Nsun4C4P6S0 806 aaKnown RBP17.58■□□□□ 0.41
Sh3rf1-201ENSMUST00000034060 BlcapP62951 87 aa17.58■□□□□ 0.41
Sh3rf1-201ENSMUST00000034060 Klk9Q32M27 251 aa17.58■□□□□ 0.4
Sh3rf1-201ENSMUST00000034060 FancmQ8BGE5 2021 aa17.58■□□□□ 0.4
Sh3rf1-201ENSMUST00000034060 Ighv8-12A0A0G2JDE1 119 aa17.58■□□□□ 0.4
Sh3rf1-201ENSMUST00000034060 Trav13-1A0A075B644 110 aa17.57■□□□□ 0.4
Sh3rf1-201ENSMUST00000034060 Trav13-4-dv7A0A075B6C2 110 aa17.57■□□□□ 0.4
Sh3rf1-201ENSMUST00000034060 Cox8cA6H666 72 aa17.57■□□□□ 0.4
Sh3rf1-201ENSMUST00000034060 Gm5629P06327 117 aa17.57■□□□□ 0.4
Sh3rf1-201ENSMUST00000034060 CenpwQ3URR0 86 aa17.56■□□□□ 0.4
Sh3rf1-201ENSMUST00000034060 Gm10542F6XDR3 90 aa17.56■□□□□ 0.4
Sh3rf1-201ENSMUST00000034060 Ighv1-85A0A075B5Y6 117 aa17.56■□□□□ 0.4
Sh3rf1-201ENSMUST00000034060 Igkv3-5A0A140T8M6 119 aa17.56■□□□□ 0.4
Sh3rf1-201ENSMUST00000034060 SptssbQ925E8 76 aa17.56■□□□□ 0.4
Sh3rf1-201ENSMUST00000034060 Igkv1-88A0A140T8N1 120 aa17.55■□□□□ 0.4
Sh3rf1-201ENSMUST00000034060 Ube2d4D3YUH6 135 aa17.54■□□□□ 0.4
Sh3rf1-201ENSMUST00000034060 B230359F08RikA0A0B4J1K3 109 aa17.54■□□□□ 0.4
Sh3rf1-201ENSMUST00000034060 Tfpi2O35536 230 aa17.53■□□□□ 0.4
Sh3rf1-201ENSMUST00000034060 Gm3618D3Z4P5 127 aa17.53■□□□□ 0.4
Sh3rf1-201ENSMUST00000034060 Gphb5Q812B2 130 aa17.53■□□□□ 0.4
Sh3rf1-201ENSMUST00000034060 Q9CX25 107 aa17.53■□□□□ 0.4
Sh3rf1-201ENSMUST00000034060 Gm10735Q3US96 136 aa17.52■□□□□ 0.4
Sh3rf1-201ENSMUST00000034060 Trav9n-4A0A075B631 113 aa17.52■□□□□ 0.4
Sh3rf1-201ENSMUST00000034060 Wdr38Q9D994 303 aa17.52■□□□□ 0.4
Sh3rf1-201ENSMUST00000034060 Ighv2-6-8A0A0A6YWY9 116 aa17.52■□□□□ 0.39
Sh3rf1-201ENSMUST00000034060 Defb12Q8K4N3 78 aa17.52■□□□□ 0.39
Sh3rf1-201ENSMUST00000034060 Sptbn2Q68FG2 2388 aa17.52■□□□□ 0.39
Sh3rf1-201ENSMUST00000034060 Anapc1P53995 1944 aaKnown RBP17.51■□□□□ 0.39
Sh3rf1-201ENSMUST00000034060 Serp2Q6TAW2 65 aa17.51■□□□□ 0.39
Sh3rf1-201ENSMUST00000034060 Rnf185Q91YT2 192 aa17.51■□□□□ 0.39
Sh3rf1-201ENSMUST00000034060 Frem1Q684R7 2191 aa17.51■□□□□ 0.39
Sh3rf1-201ENSMUST00000034060 P18527 97 aa17.51■□□□□ 0.39
Sh3rf1-201ENSMUST00000034060 P01659 112 aa17.51■□□□□ 0.39
Sh3rf1-201ENSMUST00000034060 Prh1P05142 261 aa17.5■□□□□ 0.39
Sh3rf1-201ENSMUST00000034060 PoleQ9WVF7 2283 aa17.5■□□□□ 0.39
Sh3rf1-201ENSMUST00000034060 Ighv1-82A0A0G2JEU7 117 aa17.5■□□□□ 0.39
Sh3rf1-201ENSMUST00000034060 Rpl18aP62717 176 aaKnown RBP17.5■□□□□ 0.39
Sh3rf1-201ENSMUST00000034060 Cacna1eQ61290 2272 aa17.5■□□□□ 0.39
Sh3rf1-201ENSMUST00000034060 Zfhx2Q2MHN3 2562 aa17.5■□□□□ 0.39
Sh3rf1-201ENSMUST00000034060 CrebbpP45481 2441 aa17.49■□□□□ 0.39
Sh3rf1-201ENSMUST00000034060 Prr14lE9Q7C4 1971 aa17.49■□□□□ 0.39
Sh3rf1-201ENSMUST00000034060 Fgfbp3Q1HCM0 245 aa17.49■□□□□ 0.39
Sh3rf1-201ENSMUST00000034060 Ly6gP35461 111 aa17.49■□□□□ 0.39
Sh3rf1-201ENSMUST00000034060 Cacna1hO88427 2365 aa17.48■□□□□ 0.39
Sh3rf1-201ENSMUST00000034060 Znf239P24399 201 aa17.48■□□□□ 0.39
Sh3rf1-201ENSMUST00000034060 Gm1968Q3T9I3 115 aa17.47■□□□□ 0.39
Sh3rf1-201ENSMUST00000034060 Smim1P0C8K7 78 aa17.47■□□□□ 0.39
Sh3rf1-201ENSMUST00000034060 FcorP0DJI6 106 aa17.47■□□□□ 0.39
Sh3rf1-201ENSMUST00000034060 P01747 120 aa17.46■□□□□ 0.39
Sh3rf1-201ENSMUST00000034060 Gm10401E9Q3K6 71 aa17.46■□□□□ 0.39
Sh3rf1-201ENSMUST00000034060 Ube2aQ9Z255 152 aa17.46■□□□□ 0.39
Sh3rf1-201ENSMUST00000034060 Psmb8P28063 276 aa17.46■□□□□ 0.39
Sh3rf1-201ENSMUST00000034060 Fhl1P97447 280 aaKnown RBP17.46■□□□□ 0.39
Sh3rf1-201ENSMUST00000034060 Trip12G5E870 2025 aaKnown RBP17.45■□□□□ 0.38
Sh3rf1-201ENSMUST00000034060 Ebi3O35228 228 aa17.45■□□□□ 0.38
Sh3rf1-201ENSMUST00000034060 BtcQ05928 177 aa17.45■□□□□ 0.38
Sh3rf1-201ENSMUST00000034060 P84751 237 aa17.45■□□□□ 0.38
Sh3rf1-201ENSMUST00000034060 C1qcQ02105 246 aa17.45■□□□□ 0.38
Sh3rf1-201ENSMUST00000034060 Plxnb3Q9QY40 1902 aa17.45■□□□□ 0.38
Sh3rf1-201ENSMUST00000034060 Ighv10-1A0A0B4J1J6 119 aa17.45■□□□□ 0.38
Sh3rf1-201ENSMUST00000034060 EnhoQ8K1D8 76 aa17.45■□□□□ 0.38
Sh3rf1-201ENSMUST00000034060 4930470P17RikQ9D542 155 aa17.45■□□□□ 0.38
Sh3rf1-201ENSMUST00000034060 Klk5Q9D140 293 aa17.45■□□□□ 0.38
Sh3rf1-201ENSMUST00000034060 Rnf152Q8BG47 203 aa17.43■□□□□ 0.38
Sh3rf1-201ENSMUST00000034060 Akap6E9Q9K8 2307 aa17.43■□□□□ 0.38
Sh3rf1-201ENSMUST00000034060 Sec61gP60060 68 aa17.43■□□□□ 0.38
Sh3rf1-201ENSMUST00000034060 Wipf1Q8K1I7 493 aa17.43■□□□□ 0.38
Sh3rf1-201ENSMUST00000034060 Lypd6Q8BPP5 171 aa17.43■□□□□ 0.38
Sh3rf1-201ENSMUST00000034060 Cfap46E9Q2C0 2641 aa17.42■□□□□ 0.38
Sh3rf1-201ENSMUST00000034060 AvpP35455 168 aa17.42■□□□□ 0.38
Sh3rf1-201ENSMUST00000034060 PtprsB0V2N1 1907 aa17.42■□□□□ 0.38
Sh3rf1-201ENSMUST00000034060 Ly6hQ9WUC3 139 aa17.41■□□□□ 0.38
Sh3rf1-201ENSMUST00000034060 Map6d1Q14BB9 191 aa17.41■□□□□ 0.38
Sh3rf1-201ENSMUST00000034060 Tcte2E9PY37 120 aa17.41■□□□□ 0.38
Sh3rf1-201ENSMUST00000034060 Gm10337F7DEP7 55 aa17.41■□□□□ 0.38
Sh3rf1-201ENSMUST00000034060 P01820 115 aa17.41■□□□□ 0.38
Sh3rf1-201ENSMUST00000034060 Pla2g2dQ9WVF6 144 aa17.4■□□□□ 0.38
Sh3rf1-201ENSMUST00000034060 CnfnQ6PCW6 111 aa17.4■□□□□ 0.38
Sh3rf1-201ENSMUST00000034060 Defb18Q30KP5 85 aa17.4■□□□□ 0.38
Sh3rf1-201ENSMUST00000034060 Ndufb1P0DN34 57 aa17.39■□□□□ 0.37
Sh3rf1-201ENSMUST00000034060 Atox1O08997 68 aaKnown RBP17.39■□□□□ 0.37
Sh3rf1-201ENSMUST00000034060 Sprr3O09116 238 aa17.39■□□□□ 0.37
Sh3rf1-201ENSMUST00000034060 Rnase1P00683 149 aa17.39■□□□□ 0.37
Sh3rf1-201ENSMUST00000034060 Prr15lQ8JZM2 100 aa17.39■□□□□ 0.37
Sh3rf1-201ENSMUST00000034060 Ahctf1Q8CJF7 2243 aaKnown RBP17.38■□□□□ 0.37
Sh3rf1-201ENSMUST00000034060 Pcdh15Q99PJ1 1943 aa17.38■□□□□ 0.37
Sh3rf1-201ENSMUST00000034060 Ighv1-5A0A0A6YWG2 117 aa17.38■□□□□ 0.37
Sh3rf1-201ENSMUST00000034060 Gm17521F6QAC8 156 aa17.38■□□□□ 0.37
Sh3rf1-201ENSMUST00000034060 Myo7bQ99MZ6 2113 aa17.38■□□□□ 0.37
Sh3rf1-201ENSMUST00000034060 Gm20604F8WIA3 75 aa17.38■□□□□ 0.37
Sh3rf1-201ENSMUST00000034060 1700012A03RikQ9DAF1 130 aa17.37■□□□□ 0.37
Sh3rf1-201ENSMUST00000034060 Reg3bP35230 175 aa17.37■□□□□ 0.37
Sh3rf1-201ENSMUST00000034060 A130051J06RikQ8CAU1 227 aa17.37■□□□□ 0.37
Sh3rf1-201ENSMUST00000034060 Q9D8Q6 235 aa17.37■□□□□ 0.37
Sh3rf1-201ENSMUST00000034060 Gm19935A0A1B0GSF9 52 aa17.36■□□□□ 0.37
Sh3rf1-201ENSMUST00000034060 9530003J23RikQ8BM26 151 aa17.35■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 83.5 ms