RNA–Protein interactions for RNA: ENSMUST00000032487.13

Vamp1-201, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vamp1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-201ENSMUST00000032487 4930544G11RikQ9CR99 193 aa8.72□□□□□ -1.01
Vamp1-201ENSMUST00000032487 Sptbn1Q62261 2363 aaKnown RBP8.72□□□□□ -1.01
Vamp1-201ENSMUST00000032487 Gm17455G3UW87 128 aa8.72□□□□□ -1.01
Vamp1-201ENSMUST00000032487 Tmem258P61166 79 aa8.72□□□□□ -1.01
Vamp1-201ENSMUST00000032487 Hist1h4aP62806 103 aaKnown RBP8.72□□□□□ -1.01
Vamp1-201ENSMUST00000032487 AW146154Q3TPQ7 468 aa8.72□□□□□ -1.01
Vamp1-201ENSMUST00000032487 Gm9925F6T2U3 160 aa8.71□□□□□ -1.01
Vamp1-201ENSMUST00000032487 Dand5Q76LW6 185 aa8.71□□□□□ -1.01
Vamp1-201ENSMUST00000032487 Cox6cQ9CPQ1 76 aa8.71□□□□□ -1.01
Vamp1-201ENSMUST00000032487 Igkv4-81A0A0G2JEY5 119 aa8.71□□□□□ -1.02
Vamp1-201ENSMUST00000032487 P01724 129 aa8.71□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Defb18Q30KP5 85 aa8.71□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Higd1cQ76I25 96 aa8.71□□□□□ -1.02
Vamp1-201ENSMUST00000032487 5730596B20RikQ8BQ08 205 aa8.71□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Ighv1-55A0A075B5W6 117 aa8.7□□□□□ -1.02
Vamp1-201ENSMUST00000032487 P01643 108 aa8.7□□□□□ -1.02
Vamp1-201ENSMUST00000032487 P01783 136 aa8.7□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Psmb11Q8BG41 302 aa8.7□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Ang4Q3TMQ6 144 aa8.7□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Pygo1Q9D0P5 417 aa8.7□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Rif1Q6PR54 2419 aaKnown RBP8.7□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Edn3P48299 214 aa8.69□□□□□ -1.02
Vamp1-201ENSMUST00000032487 TeppQ6IMH0 216 aa8.69□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Cmya5Q70KF4 3739 aa8.69□□□□□ -1.02
Vamp1-201ENSMUST00000032487 CadB2RQC6 2225 aa8.69□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Zfp951A0A087WRH0 451 aa8.69□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Trbv13-1A0A0B4J1P8 112 aa8.69□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Gm19935A0A1B0GSF9 52 aa8.69□□□□□ -1.02
Vamp1-201ENSMUST00000032487 LeprotO89013 131 aa8.68□□□□□ -1.02
Vamp1-201ENSMUST00000032487 S100a4P07091 101 aa8.68□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Tmem263Q9DAM7 115 aa8.68□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Ighv1-4A0A075B5T4 117 aa8.68□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Mrps12O35680 139 aa8.68□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Ccl19O70460 108 aa8.68□□□□□ -1.02
Vamp1-201ENSMUST00000032487 A530064D06RikQ8BNV8 229 aa8.68□□□□□ -1.02
Vamp1-201ENSMUST00000032487 4930442H23RikQ9D5G7 103 aa8.68□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Col6a4A2AX52 2309 aa8.68□□□□□ -1.02
Vamp1-201ENSMUST00000032487 BokO35425 213 aa8.67□□□□□ -1.02
Vamp1-201ENSMUST00000032487 SpinklQ8CEK3 90 aa8.67□□□□□ -1.02
Vamp1-201ENSMUST00000032487 BaalcQ8VHV1 145 aa8.67□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Wisp2Q9Z0G4 251 aa8.67□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Gm10337F7DEP7 55 aa8.67□□□□□ -1.02
Vamp1-201ENSMUST00000032487 P01729 129 aa8.67□□□□□ -1.02
Vamp1-201ENSMUST00000032487 LystP97412 3788 aa8.67□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Ighv1-31A0A0A6YWK5 117 aa8.67□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Ccl6P27784 116 aa8.67□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Ccl21aP84444 133 aa8.67□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Ccl21bP86792 133 aa8.67□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Ccl21cP86793 133 aa8.67□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Mpv17l2Q8VIK2 200 aa8.67□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Nav2E9Q842 2432 aa8.67□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Gm9195A0A140LHT4 2805 aa8.66□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Ighv1-80A0A075B5Y3 117 aa8.66□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Ighv1-5A0A0A6YWG2 117 aa8.66□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Iah1Q9DB29 249 aa8.66□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Timm17aQ9Z0V8 171 aa8.66□□□□□ -1.02
Vamp1-201ENSMUST00000032487 1700056E22RikF7CNM6 234 aa8.66□□□□□ -1.02
Vamp1-201ENSMUST00000032487 E030018B13RikJ3QMS9 113 aa8.66□□□□□ -1.02
Vamp1-201ENSMUST00000032487 P06329 120 aa8.66□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Q8R092 253 aa8.66□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Ighv1-53A0A075B5W3 117 aa8.65□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Zfand3Q497H0 227 aa8.65□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Helz2E9QAM5 2947 aaKnown RBP8.65□□□□□ -1.02
Vamp1-201ENSMUST00000032487 FlnbQ80X90 2602 aaKnown RBP8.65□□□□□ -1.02
Vamp1-201ENSMUST00000032487 Igkv4-59A0A0B4J1I8 117 aa8.65□□□□□ -1.03
Vamp1-201ENSMUST00000032487 Eif4ebp3Q80VV3 101 aa8.65□□□□□ -1.03
Vamp1-201ENSMUST00000032487 Defa21Q8C1P2 93 aa8.65□□□□□ -1.03
Vamp1-201ENSMUST00000032487 4930415O20RikQ8CDT5 131 aa8.65□□□□□ -1.03
Vamp1-201ENSMUST00000032487 Bub3Q9WVA3 326 aa8.65□□□□□ -1.03
Vamp1-201ENSMUST00000032487 P01727 129 aa8.64□□□□□ -1.03
Vamp1-201ENSMUST00000032487 Rpl18aP62717 176 aaKnown RBP8.64□□□□□ -1.03
Vamp1-201ENSMUST00000032487 Polr2kQ63871 58 aa8.64□□□□□ -1.03
Vamp1-201ENSMUST00000032487 Gm4861Q8C5A4 106 aa8.64□□□□□ -1.03
Vamp1-201ENSMUST00000032487 Utp20Q5XG71 2788 aaKnown RBP8.64□□□□□ -1.03
Vamp1-201ENSMUST00000032487 Unc79Q0KK59 2596 aa8.64□□□□□ -1.03
Vamp1-201ENSMUST00000032487 Ighv3-4A0A0A6YXF1 117 aa8.64□□□□□ -1.03
Vamp1-201ENSMUST00000032487 CntfrO88507 372 aa8.64□□□□□ -1.03
Vamp1-201ENSMUST00000032487 A730015C16RikQ8C992 119 aa8.64□□□□□ -1.03
Vamp1-201ENSMUST00000032487 Pgpep1lQ9CWB5 130 aa8.64□□□□□ -1.03
Vamp1-201ENSMUST00000032487 Map1aQ9QYR6 2776 aa8.64□□□□□ -1.03
Vamp1-201ENSMUST00000032487 Cep192E9Q4Y4 2514 aaKnown RBP8.64□□□□□ -1.03
Vamp1-201ENSMUST00000032487 Gm29666A0A087WQ99 126 aa8.63□□□□□ -1.03
Vamp1-201ENSMUST00000032487 Trav4-3A0A0B4J1K1 110 aa8.63□□□□□ -1.03
Vamp1-201ENSMUST00000032487 Defa7P50705 93 aa8.63□□□□□ -1.03
Vamp1-201ENSMUST00000032487 Fhl1P97447 280 aaKnown RBP8.63□□□□□ -1.03
Vamp1-201ENSMUST00000032487 Ins2P01326 110 aa8.63□□□□□ -1.03
Vamp1-201ENSMUST00000032487 C2cd3Q52KB6 2323 aa8.63□□□□□ -1.03
Vamp1-201ENSMUST00000032487 Bahcc1Q3UHR0 2643 aa8.63□□□□□ -1.03
Vamp1-201ENSMUST00000032487 Igkv4-90A0A075B5L3 117 aa8.62□□□□□ -1.03
Vamp1-201ENSMUST00000032487 FcorP0DJI6 106 aa8.62□□□□□ -1.03
Vamp1-201ENSMUST00000032487 MifP34884 115 aaKnown RBP8.62□□□□□ -1.03
Vamp1-201ENSMUST00000032487 Serp2Q6TAW2 65 aa8.62□□□□□ -1.03
Vamp1-201ENSMUST00000032487 Mrpl55Q9CZ83 127 aa8.62□□□□□ -1.03
Vamp1-201ENSMUST00000032487 Higd1aQ9JLR9 95 aa8.62□□□□□ -1.03
Vamp1-201ENSMUST00000032487 Usp9xP70398 2559 aaKnown RBP8.62□□□□□ -1.03
Vamp1-201ENSMUST00000032487 Arhgap32Q811P8 2089 aa8.62□□□□□ -1.03
Vamp1-201ENSMUST00000032487 Epg5Q80TA9 2572 aa8.62□□□□□ -1.03
Vamp1-201ENSMUST00000032487 Akap6E9Q9K8 2307 aa8.62□□□□□ -1.03
Vamp1-201ENSMUST00000032487 A130051J06RikQ8CAU1 227 aa8.62□□□□□ -1.03
Vamp1-201ENSMUST00000032487 FlncQ8VHX6 2726 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 53.5 ms