RNA–Protein interactions for RNA: ENSMUST00000032487.13

Vamp1-201, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vamp1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-201ENSMUST00000032487 Gm35339A0A140LHH9 1649 aa21.91■■□□□ 1.1
Vamp1-201ENSMUST00000032487 NischQ80TM9 1593 aa21.84■■□□□ 1.09
Vamp1-201ENSMUST00000032487 Abcc9P70170 1546 aa21.09■□□□□ 0.97
Vamp1-201ENSMUST00000032487 Abcc8B2RUS7 1588 aa21.03■□□□□ 0.96
Vamp1-201ENSMUST00000032487 Rpgrip1Q9EPQ2 1331 aa20.23■□□□□ 0.83
Vamp1-201ENSMUST00000032487 ScribQ80U72 1612 aa20.15■□□□□ 0.82
Vamp1-201ENSMUST00000032487 NacadQ5SWP3 1504 aa19.58■□□□□ 0.73
Vamp1-201ENSMUST00000032487 Kdm5dQ62240 1548 aa19.56■□□□□ 0.72
Vamp1-201ENSMUST00000032487 Acin1Q9JIX8 1338 aaKnown RBP19.43■□□□□ 0.7
Vamp1-201ENSMUST00000032487 Dcaf1Q80TR8 1506 aa19.35■□□□□ 0.69
Vamp1-201ENSMUST00000032487 Rtl1Q7M732 1744 aa19.34■□□□□ 0.69
Vamp1-201ENSMUST00000032487 Pcgf6Q99NA9 353 aa19.32■□□□□ 0.68
Vamp1-201ENSMUST00000032487 Rhox8Q6VSS7 320 aa19.25■□□□□ 0.67
Vamp1-201ENSMUST00000032487 Ccdc180J3QNE4 1664 aa19.21■□□□□ 0.67
Vamp1-201ENSMUST00000032487 Sycp2Q9CUU3 1500 aa19.18■□□□□ 0.66
Vamp1-201ENSMUST00000032487 Rb1cc1Q9ESK9 1588 aa19.04■□□□□ 0.64
Vamp1-201ENSMUST00000032487 BicraF8VPZ9 1578 aa18.88■□□□□ 0.61
Vamp1-201ENSMUST00000032487 Baz1aO88379 1555 aa18.77■□□□□ 0.6
Vamp1-201ENSMUST00000032487 Neurod1Q60867 357 aa18.71■□□□□ 0.59
Vamp1-201ENSMUST00000032487 Ehmt2Q9Z148 1263 aaKnown RBP18.66■□□□□ 0.58
Vamp1-201ENSMUST00000032487 Trim41Q5NCC3 630 aa18.65■□□□□ 0.58
Vamp1-201ENSMUST00000032487 Crybg2B7ZCC2 1516 aa18.64■□□□□ 0.57
Vamp1-201ENSMUST00000032487 Las1lA2BE28 776 aaKnown RBP18.64■□□□□ 0.57
Vamp1-201ENSMUST00000032487 Supt5hO55201 1082 aaKnown RBP18.63■□□□□ 0.57
Vamp1-201ENSMUST00000032487 Zcchc6Q5BLK4 1491 aaKnown RBP18.57■□□□□ 0.56
Vamp1-201ENSMUST00000032487 Myt1Q8CFC2 1127 aa18.47■□□□□ 0.55
Vamp1-201ENSMUST00000032487 1700123L14RikQ3V2K7 440 aa18.4■□□□□ 0.54
Vamp1-201ENSMUST00000032487 CenpbP27790 599 aa18.38■□□□□ 0.53
Vamp1-201ENSMUST00000032487 Pds5bQ4VA53 1446 aaKnown RBP18.36■□□□□ 0.53
Vamp1-201ENSMUST00000032487 Dnajc5bQ9CQ94 199 aa18.24■□□□□ 0.51
Vamp1-201ENSMUST00000032487 HrcG5E8J6 738 aa18.23■□□□□ 0.51
Vamp1-201ENSMUST00000032487 DiexfQ8BTT6 772 aaKnown RBP18.23■□□□□ 0.51
Vamp1-201ENSMUST00000032487 Smarca2Q6DIC0 1577 aa18.21■□□□□ 0.51
Vamp1-201ENSMUST00000032487 Atad2bE9Q166 1460 aaKnown RBP18.21■□□□□ 0.51
Vamp1-201ENSMUST00000032487 Cecr2E9Q2Z1 1453 aa18.16■□□□□ 0.5
Vamp1-201ENSMUST00000032487 Smarca4Q3TKT4 1613 aaKnown RBP18.11■□□□□ 0.49
Vamp1-201ENSMUST00000032487 Csrnp3P59055 597 aa18.11■□□□□ 0.49
Vamp1-201ENSMUST00000032487 Anks4bQ8K3X6 423 aa18.09■□□□□ 0.49
Vamp1-201ENSMUST00000032487 Thoc2B1AZI6 1594 aaKnown RBP18.07■□□□□ 0.48
Vamp1-201ENSMUST00000032487 Iqgap2Q3UQ44 1575 aa18■□□□□ 0.47
Vamp1-201ENSMUST00000032487 Ercc6F8VPZ5 1481 aa18■□□□□ 0.47
Vamp1-201ENSMUST00000032487 Ccdc136Q3TVA9 1136 aa17.99■□□□□ 0.47
Vamp1-201ENSMUST00000032487 Bcl11aQ9QYE3 773 aa17.96■□□□□ 0.46
Vamp1-201ENSMUST00000032487 Aplp2Q06335 707 aa17.94■□□□□ 0.46
Vamp1-201ENSMUST00000032487 Cc2d2aQ8CFW7 1633 aa17.86■□□□□ 0.45
Vamp1-201ENSMUST00000032487 Cngb1E1AZ71 1325 aa17.82■□□□□ 0.44
Vamp1-201ENSMUST00000032487 Frmpd1A2AKB4 1549 aa17.8■□□□□ 0.44
Vamp1-201ENSMUST00000032487 Zeb1Q64318 1117 aa17.8■□□□□ 0.44
Vamp1-201ENSMUST00000032487 Wdr62Q3U3T8 1523 aa17.8■□□□□ 0.44
Vamp1-201ENSMUST00000032487 Brd4Q9ESU6 1400 aaKnown RBP17.8■□□□□ 0.44
Vamp1-201ENSMUST00000032487 Sall2Q9QX96 1004 aa17.79■□□□□ 0.44
Vamp1-201ENSMUST00000032487 CftrP26361 1476 aa17.76■□□□□ 0.43
Vamp1-201ENSMUST00000032487 Synj1Q8CHC4 1574 aa17.73■□□□□ 0.43
Vamp1-201ENSMUST00000032487 Phldb1Q6PDH0 1371 aaKnown RBP17.71■□□□□ 0.43
Vamp1-201ENSMUST00000032487 Ube2uB1AUC4 352 aa17.7■□□□□ 0.42
Vamp1-201ENSMUST00000032487 Fam135aQ6NS59 1506 aa17.7■□□□□ 0.42
Vamp1-201ENSMUST00000032487 Cttnbp2B9EJA2 1648 aa17.7■□□□□ 0.42
Vamp1-201ENSMUST00000032487 Esf1Q3V1V3 845 aaKnown RBP17.65■□□□□ 0.42
Vamp1-201ENSMUST00000032487 Ubl4bQ9CQ84 188 aa17.63■□□□□ 0.41
Vamp1-201ENSMUST00000032487 NefmP08553 848 aa17.58■□□□□ 0.4
Vamp1-201ENSMUST00000032487 Gm38655A0A286YDK6 273 aa17.51■□□□□ 0.39
Vamp1-201ENSMUST00000032487 Unc13aQ4KUS2 1712 aa17.51■□□□□ 0.39
Vamp1-201ENSMUST00000032487 PrkcshO08795 521 aa17.51■□□□□ 0.39
Vamp1-201ENSMUST00000032487 Cdk11bP24788 784 aaKnown RBP17.46■□□□□ 0.39
Vamp1-201ENSMUST00000032487 Baz1bQ9Z277 1479 aa17.46■□□□□ 0.39
Vamp1-201ENSMUST00000032487 Cep164Q5DU05 1446 aa17.41■□□□□ 0.38
Vamp1-201ENSMUST00000032487 Nop58Q6DFW4 536 aaKnown RBP17.38■□□□□ 0.37
Vamp1-201ENSMUST00000032487 Mrc2Q64449 1479 aa17.36■□□□□ 0.37
Vamp1-201ENSMUST00000032487 Fam71e1A1L3C1 212 aa17.34■□□□□ 0.37
Vamp1-201ENSMUST00000032487 Rsf1E9PWW9 1441 aaKnown RBP17.32■□□□□ 0.36
Vamp1-201ENSMUST00000032487 Mier1Q5UAK0 511 aa17.31■□□□□ 0.36
Vamp1-201ENSMUST00000032487 Kif15Q6P9L6 1387 aa17.31■□□□□ 0.36
Vamp1-201ENSMUST00000032487 Ifnlr1Q8CGK5 535 aa17.28■□□□□ 0.36
Vamp1-201ENSMUST00000032487 Cux2P70298 1426 aa17.23■□□□□ 0.35
Vamp1-201ENSMUST00000032487 Golga3P55937 1487 aa17.21■□□□□ 0.35
Vamp1-201ENSMUST00000032487 Amer1Q7TS75 1132 aa17.21■□□□□ 0.35
Vamp1-201ENSMUST00000032487 Aebp2Q9Z248 504 aaKnown RBP17.21■□□□□ 0.35
Vamp1-201ENSMUST00000032487 Wdr66E9Q743 1299 aa17.19■□□□□ 0.34
Vamp1-201ENSMUST00000032487 ClspnQ80YR7 1315 aa17.17■□□□□ 0.34
Vamp1-201ENSMUST00000032487 Lamc3Q9R0B6 1581 aa17.17■□□□□ 0.34
Vamp1-201ENSMUST00000032487 Npm1Q61937 292 aaKnown RBP17.15■□□□□ 0.34
Vamp1-201ENSMUST00000032487 Top2bQ64511 1612 aa17.11■□□□□ 0.33
Vamp1-201ENSMUST00000032487 Il27Q8K3I6 234 aa17.09■□□□□ 0.33
Vamp1-201ENSMUST00000032487 Mapk8ip2Q9ERE9 830 aa17.07■□□□□ 0.32
Vamp1-201ENSMUST00000032487 SafbD3YXK2 937 aaKnown RBP17.01■□□□□ 0.31
Vamp1-201ENSMUST00000032487 Ccdc18Q640L5 1455 aa17■□□□□ 0.31
Vamp1-201ENSMUST00000032487 Kif21aQ9QXL2 1672 aa17■□□□□ 0.31
Vamp1-201ENSMUST00000032487 TnnQ80Z71 1560 aa16.99■□□□□ 0.31
Vamp1-201ENSMUST00000032487 Fmn1Q05860 1466 aa16.97■□□□□ 0.31
Vamp1-201ENSMUST00000032487 Hnrnpul2Q00PI9 745 aaKnown RBP16.95■□□□□ 0.3
Vamp1-201ENSMUST00000032487 Ppargc1bQ8VHJ7 1014 aa16.94■□□□□ 0.3
Vamp1-201ENSMUST00000032487 Lrriq1Q0P5X1 1673 aa16.94■□□□□ 0.3
Vamp1-201ENSMUST00000032487 Camsap1A2AHC3 1581 aa16.89■□□□□ 0.29
Vamp1-201ENSMUST00000032487 Tnnt3Q9QZ47 272 aa16.89■□□□□ 0.29
Vamp1-201ENSMUST00000032487 LrpprcQ6PB66 1392 aaKnown RBP16.88■□□□□ 0.29
Vamp1-201ENSMUST00000032487 Dhx29Q6PGC1 1365 aaKnown RBP16.88■□□□□ 0.29
Vamp1-201ENSMUST00000032487 Rtl5Q5DTT4 599 aa16.87■□□□□ 0.29
Vamp1-201ENSMUST00000032487 Gab3Q8BSM5 595 aa16.84■□□□□ 0.29
Vamp1-201ENSMUST00000032487 Ccdc88bQ4QRL3 1481 aa16.82■□□□□ 0.28
Vamp1-201ENSMUST00000032487 Anp32aO35381 247 aa16.82■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 116.7 ms