RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 Gm45717A0A1B0GT68 152 aa12.12□□□□□ -0.47
Trim8-201ENSMUST00000026008 Fam222aQ6PGH4 453 aa12.12□□□□□ -0.47
Trim8-201ENSMUST00000026008 Gm20499D3Z4G5 72 aa12.12□□□□□ -0.47
Trim8-201ENSMUST00000026008 Ankrd39Q9D2X0 183 aa12.12□□□□□ -0.47
Trim8-201ENSMUST00000026008 BC067074F6RXI4 2391 aa12.12□□□□□ -0.47
Trim8-201ENSMUST00000026008 Arid1bE9Q4N7 2244 aa12.12□□□□□ -0.47
Trim8-201ENSMUST00000026008 C920008G01RikA0A0B4J1N1 112 aa12.11□□□□□ -0.47
Trim8-201ENSMUST00000026008 CckP09240 115 aa12.11□□□□□ -0.47
Trim8-201ENSMUST00000026008 Ndufs7Q9DC70 224 aa12.11□□□□□ -0.47
Trim8-201ENSMUST00000026008 Ighv2-3A0A075B696 115 aa12.11□□□□□ -0.47
Trim8-201ENSMUST00000026008 Runx1Q03347 451 aa12.11□□□□□ -0.47
Trim8-201ENSMUST00000026008 1810032O08RikE9PZV8 113 aa12.11□□□□□ -0.47
Trim8-201ENSMUST00000026008 P01753 117 aa12.11□□□□□ -0.47
Trim8-201ENSMUST00000026008 Ube2d1P61080 147 aaKnown RBP12.11□□□□□ -0.47
Trim8-201ENSMUST00000026008 Trav2Q5R1I9 109 aa12.11□□□□□ -0.47
Trim8-201ENSMUST00000026008 Ighv1-52A0A0A6YXC3 117 aa12.1□□□□□ -0.47
Trim8-201ENSMUST00000026008 Ighv8-12A0A0G2JDE1 119 aa12.1□□□□□ -0.47
Trim8-201ENSMUST00000026008 Igkv4-62A0A0G2JDW9 117 aa12.1□□□□□ -0.47
Trim8-201ENSMUST00000026008 Pglyrp1O88593 182 aa12.1□□□□□ -0.47
Trim8-201ENSMUST00000026008 Gm21748Q3UE70 102 aa12.1□□□□□ -0.47
Trim8-201ENSMUST00000026008 BC025920Q3US60 128 aa12.1□□□□□ -0.47
Trim8-201ENSMUST00000026008 P01802 115 aa12.09□□□□□ -0.47
Trim8-201ENSMUST00000026008 Dynlrb2Q9DAJ5 96 aa12.09□□□□□ -0.47
Trim8-201ENSMUST00000026008 Gm6812B1AXU1 112 aa12.09□□□□□ -0.47
Trim8-201ENSMUST00000026008 Trbv16A0A0B4J1H3 115 aa12.09□□□□□ -0.47
Trim8-201ENSMUST00000026008 Rpl13aP19253 203 aaKnown RBP12.09□□□□□ -0.47
Trim8-201ENSMUST00000026008 Wnk1P83741 2377 aa12.08□□□□□ -0.47
Trim8-201ENSMUST00000026008 Chd9Q8BYH8 2885 aa12.08□□□□□ -0.48
Trim8-201ENSMUST00000026008 Fam19a4Q7TPG5 135 aa12.08□□□□□ -0.48
Trim8-201ENSMUST00000026008 Ifitm10Q8BR26 201 aa12.08□□□□□ -0.48
Trim8-201ENSMUST00000026008 Zc2hc1bQ9D534 172 aa12.08□□□□□ -0.48
Trim8-201ENSMUST00000026008 Mrpl35Q9CQL6 188 aa12.08□□□□□ -0.48
Trim8-201ENSMUST00000026008 Mpv17l2Q8VIK2 200 aa12.07□□□□□ -0.48
Trim8-201ENSMUST00000026008 Dmrt3Q80WT2 476 aa12.07□□□□□ -0.48
Trim8-201ENSMUST00000026008 Timm17aQ9Z0V8 171 aa12.07□□□□□ -0.48
Trim8-201ENSMUST00000026008 Trav4n-4A0A075B615 110 aa12.07□□□□□ -0.48
Trim8-201ENSMUST00000026008 Lect2O88803 151 aa12.07□□□□□ -0.48
Trim8-201ENSMUST00000026008 Cyyr1Q8VIH7 165 aa12.07□□□□□ -0.48
Trim8-201ENSMUST00000026008 MtorQ9JLN9 2549 aa12.07□□□□□ -0.48
Trim8-201ENSMUST00000026008 2310009B15RikA0A0A6YWI4 143 aa12.06□□□□□ -0.48
Trim8-201ENSMUST00000026008 Trav3-1Q5R1I8 114 aa12.06□□□□□ -0.48
Trim8-201ENSMUST00000026008 Klhdc1Q80YG3 406 aa12.05□□□□□ -0.48
Trim8-201ENSMUST00000026008 Rpl32P62911 135 aaKnown RBP12.05□□□□□ -0.48
Trim8-201ENSMUST00000026008 TtrP07309 147 aa12.05□□□□□ -0.48
Trim8-201ENSMUST00000026008 Synj2bpQ9D6K5 145 aa12.05□□□□□ -0.48
Trim8-201ENSMUST00000026008 Ighv1-85A0A075B5Y6 117 aa12.04□□□□□ -0.48
Trim8-201ENSMUST00000026008 Gm933J3QPC1 141 aa12.04□□□□□ -0.48
Trim8-201ENSMUST00000026008 AI854703Q8BIN3 203 aa12.04□□□□□ -0.48
Trim8-201ENSMUST00000026008 Ighv8-5A0A0A6YY60 119 aa12.04□□□□□ -0.48
Trim8-201ENSMUST00000026008 Gm17455G3UW87 128 aa12.04□□□□□ -0.48
Trim8-201ENSMUST00000026008 Krtap26-1Q9D7N2 215 aa12.04□□□□□ -0.48
Trim8-201ENSMUST00000026008 LeprotO89013 131 aa12.03□□□□□ -0.48
Trim8-201ENSMUST00000026008 Bri3P28662 125 aa12.03□□□□□ -0.48
Trim8-201ENSMUST00000026008 Il1f10Q8R459 152 aa12.03□□□□□ -0.48
Trim8-201ENSMUST00000026008 Znf580Q9DB38 172 aa12.03□□□□□ -0.48
Trim8-201ENSMUST00000026008 Igfn1Q3KNY0 2849 aa12.03□□□□□ -0.48
Trim8-201ENSMUST00000026008 Tac4Q99N14 128 aa12.03□□□□□ -0.48
Trim8-201ENSMUST00000026008 Tmem263Q9DAM7 115 aa12.03□□□□□ -0.48
Trim8-201ENSMUST00000026008 Gm9513B3GLJ6 99 aa12.03□□□□□ -0.48
Trim8-201ENSMUST00000026008 Ube2d3P61079 147 aa12.03□□□□□ -0.48
Trim8-201ENSMUST00000026008 Ube2d2P62838 147 aa12.03□□□□□ -0.48
Trim8-201ENSMUST00000026008 Gm11444F6QMA6 170 aa12.02□□□□□ -0.48
Trim8-201ENSMUST00000026008 Defb47Q30KN1 79 aa12.02□□□□□ -0.48
Trim8-201ENSMUST00000026008 Ighv1-63A0A075B5X2 117 aa12.01□□□□□ -0.49
Trim8-201ENSMUST00000026008 Tcrg-C1A0A075B5Z0 172 aa12.01□□□□□ -0.49
Trim8-201ENSMUST00000026008 Cox8cA6H666 72 aa12.01□□□□□ -0.49
Trim8-201ENSMUST00000026008 Gm10490F6VBM2 120 aa12.01□□□□□ -0.49
Trim8-201ENSMUST00000026008 Smr3aQ61900 147 aa12.01□□□□□ -0.49
Trim8-201ENSMUST00000026008 Chd6A3KFM7 2711 aa12.01□□□□□ -0.49
Trim8-201ENSMUST00000026008 Spata45Q9CVW4 97 aa12.01□□□□□ -0.49
Trim8-201ENSMUST00000026008 Mfap4Q9D1H9 257 aa12.01□□□□□ -0.49
Trim8-201ENSMUST00000026008 Reg3gO09049 174 aa12.01□□□□□ -0.49
Trim8-201ENSMUST00000026008 Gm20730A0A075B5J6 119 aa12□□□□□ -0.49
Trim8-201ENSMUST00000026008 Crip2Q9DCT8 208 aaKnown RBP12□□□□□ -0.49
Trim8-201ENSMUST00000026008 Rif1Q6PR54 2419 aaKnown RBP12□□□□□ -0.49
Trim8-201ENSMUST00000026008 Atp5lQ9CPQ8 103 aa12□□□□□ -0.49
Trim8-201ENSMUST00000026008 Morn5Q9DAI9 170 aa12□□□□□ -0.49
Trim8-201ENSMUST00000026008 Ccl24Q9JKC0 119 aa12□□□□□ -0.49
Trim8-201ENSMUST00000026008 A930009A15RikG3UYI6 118 aa11.99□□□□□ -0.49
Trim8-201ENSMUST00000026008 AngP21570 145 aa11.99□□□□□ -0.49
Trim8-201ENSMUST00000026008 A530064D06RikQ8BNV8 229 aa11.99□□□□□ -0.49
Trim8-201ENSMUST00000026008 Cryba4Q9JJV0 196 aa11.99□□□□□ -0.49
Trim8-201ENSMUST00000026008 Myo18bE9PV66 2605 aa11.98□□□□□ -0.49
Trim8-201ENSMUST00000026008 Igkv4-91A0A075B5L2 119 aa11.98□□□□□ -0.49
Trim8-201ENSMUST00000026008 Defb18Q30KP5 85 aa11.98□□□□□ -0.49
Trim8-201ENSMUST00000026008 Rmi2Q3UPE3 149 aa11.98□□□□□ -0.49
Trim8-201ENSMUST00000026008 Samd5Q3V1H9 173 aa11.98□□□□□ -0.49
Trim8-201ENSMUST00000026008 Trav13d-1A0A075B606 110 aa11.98□□□□□ -0.49
Trim8-201ENSMUST00000026008 NpwA0A1L1STR8 176 aa11.98□□□□□ -0.49
Trim8-201ENSMUST00000026008 B230217C12RikE9Q3Z1 139 aa11.98□□□□□ -0.49
Trim8-201ENSMUST00000026008 Gm9913Q8BQQ2 135 aa11.97□□□□□ -0.49
Trim8-201ENSMUST00000026008 4930564D02RikQ9D4S4 103 aa11.97□□□□□ -0.49
Trim8-201ENSMUST00000026008 ColqO35348 457 aa11.97□□□□□ -0.49
Trim8-201ENSMUST00000026008 Fhl2O70433 279 aa11.97□□□□□ -0.49
Trim8-201ENSMUST00000026008 Fam216aQ9DB54 251 aa11.97□□□□□ -0.49
Trim8-201ENSMUST00000026008 Cdip1Q9DB75 208 aa11.96□□□□□ -0.49
Trim8-201ENSMUST00000026008 FlnaQ8BTM8 2647 aaKnown RBP11.96□□□□□ -0.49
Trim8-201ENSMUST00000026008 Cfap126Q6P8X9 189 aa11.96□□□□□ -0.49
Trim8-201ENSMUST00000026008 Ighv5-9-1A0A0A6YVS4 126 aa11.96□□□□□ -0.5
Trim8-201ENSMUST00000026008 Ighv1-5A0A0A6YWG2 117 aa11.96□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 49.9 ms