RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 Gm45717A0A1B0GT68 152 aa12.12□□□□□ -0.47
Trim8-201ENSMUST00000026008 Fam222aQ6PGH4 453 aa12.12□□□□□ -0.47
Trim8-201ENSMUST00000026008 Gm20499D3Z4G5 72 aa12.12□□□□□ -0.47
Trim8-201ENSMUST00000026008 Ankrd39Q9D2X0 183 aa12.12□□□□□ -0.47
Trim8-201ENSMUST00000026008 BC067074F6RXI4 2391 aa12.12□□□□□ -0.47
Trim8-201ENSMUST00000026008 Arid1bE9Q4N7 2244 aa12.12□□□□□ -0.47
Trim8-201ENSMUST00000026008 C920008G01RikA0A0B4J1N1 112 aa12.11□□□□□ -0.47
Trim8-201ENSMUST00000026008 CckP09240 115 aa12.11□□□□□ -0.47
Trim8-201ENSMUST00000026008 Ndufs7Q9DC70 224 aa12.11□□□□□ -0.47
Trim8-201ENSMUST00000026008 Ighv2-3A0A075B696 115 aa12.11□□□□□ -0.47
Trim8-201ENSMUST00000026008 Runx1Q03347 451 aa12.11□□□□□ -0.47
Trim8-201ENSMUST00000026008 1810032O08RikE9PZV8 113 aa12.11□□□□□ -0.47
Trim8-201ENSMUST00000026008 P01753 117 aa12.11□□□□□ -0.47
Trim8-201ENSMUST00000026008 Ube2d1P61080 147 aaKnown RBP12.11□□□□□ -0.47
Trim8-201ENSMUST00000026008 Trav2Q5R1I9 109 aa12.11□□□□□ -0.47
Trim8-201ENSMUST00000026008 Ighv1-52A0A0A6YXC3 117 aa12.1□□□□□ -0.47
Trim8-201ENSMUST00000026008 Ighv8-12A0A0G2JDE1 119 aa12.1□□□□□ -0.47
Trim8-201ENSMUST00000026008 Igkv4-62A0A0G2JDW9 117 aa12.1□□□□□ -0.47
Trim8-201ENSMUST00000026008 Pglyrp1O88593 182 aa12.1□□□□□ -0.47
Trim8-201ENSMUST00000026008 Gm21748Q3UE70 102 aa12.1□□□□□ -0.47
Trim8-201ENSMUST00000026008 BC025920Q3US60 128 aa12.1□□□□□ -0.47
Trim8-201ENSMUST00000026008 P01802 115 aa12.09□□□□□ -0.47
Trim8-201ENSMUST00000026008 Dynlrb2Q9DAJ5 96 aa12.09□□□□□ -0.47
Trim8-201ENSMUST00000026008 Gm6812B1AXU1 112 aa12.09□□□□□ -0.47
Trim8-201ENSMUST00000026008 Trbv16A0A0B4J1H3 115 aa12.09□□□□□ -0.47
Trim8-201ENSMUST00000026008 Rpl13aP19253 203 aaKnown RBP12.09□□□□□ -0.47
Trim8-201ENSMUST00000026008 Wnk1P83741 2377 aa12.08□□□□□ -0.47
Trim8-201ENSMUST00000026008 Chd9Q8BYH8 2885 aa12.08□□□□□ -0.48
Trim8-201ENSMUST00000026008 Fam19a4Q7TPG5 135 aa12.08□□□□□ -0.48
Trim8-201ENSMUST00000026008 Ifitm10Q8BR26 201 aa12.08□□□□□ -0.48
Trim8-201ENSMUST00000026008 Zc2hc1bQ9D534 172 aa12.08□□□□□ -0.48
Trim8-201ENSMUST00000026008 Mrpl35Q9CQL6 188 aa12.08□□□□□ -0.48
Trim8-201ENSMUST00000026008 Mpv17l2Q8VIK2 200 aa12.07□□□□□ -0.48
Trim8-201ENSMUST00000026008 Dmrt3Q80WT2 476 aa12.07□□□□□ -0.48
Trim8-201ENSMUST00000026008 Timm17aQ9Z0V8 171 aa12.07□□□□□ -0.48
Trim8-201ENSMUST00000026008 Trav4n-4A0A075B615 110 aa12.07□□□□□ -0.48
Trim8-201ENSMUST00000026008 Lect2O88803 151 aa12.07□□□□□ -0.48
Trim8-201ENSMUST00000026008 Cyyr1Q8VIH7 165 aa12.07□□□□□ -0.48
Trim8-201ENSMUST00000026008 MtorQ9JLN9 2549 aa12.07□□□□□ -0.48
Trim8-201ENSMUST00000026008 2310009B15RikA0A0A6YWI4 143 aa12.06□□□□□ -0.48
Trim8-201ENSMUST00000026008 Trav3-1Q5R1I8 114 aa12.06□□□□□ -0.48
Trim8-201ENSMUST00000026008 Klhdc1Q80YG3 406 aa12.05□□□□□ -0.48
Trim8-201ENSMUST00000026008 Rpl32P62911 135 aaKnown RBP12.05□□□□□ -0.48
Trim8-201ENSMUST00000026008 TtrP07309 147 aa12.05□□□□□ -0.48
Trim8-201ENSMUST00000026008 Synj2bpQ9D6K5 145 aa12.05□□□□□ -0.48
Trim8-201ENSMUST00000026008 Ighv1-85A0A075B5Y6 117 aa12.04□□□□□ -0.48
Trim8-201ENSMUST00000026008 Gm933J3QPC1 141 aa12.04□□□□□ -0.48
Trim8-201ENSMUST00000026008 AI854703Q8BIN3 203 aa12.04□□□□□ -0.48
Trim8-201ENSMUST00000026008 Ighv8-5A0A0A6YY60 119 aa12.04□□□□□ -0.48
Trim8-201ENSMUST00000026008 Gm17455G3UW87 128 aa12.04□□□□□ -0.48
Trim8-201ENSMUST00000026008 Krtap26-1Q9D7N2 215 aa12.04□□□□□ -0.48
Trim8-201ENSMUST00000026008 LeprotO89013 131 aa12.03□□□□□ -0.48
Trim8-201ENSMUST00000026008 Bri3P28662 125 aa12.03□□□□□ -0.48
Trim8-201ENSMUST00000026008 Il1f10Q8R459 152 aa12.03□□□□□ -0.48
Trim8-201ENSMUST00000026008 Znf580Q9DB38 172 aa12.03□□□□□ -0.48
Trim8-201ENSMUST00000026008 Igfn1Q3KNY0 2849 aa12.03□□□□□ -0.48
Trim8-201ENSMUST00000026008 Tac4Q99N14 128 aa12.03□□□□□ -0.48
Trim8-201ENSMUST00000026008 Tmem263Q9DAM7 115 aa12.03□□□□□ -0.48
Trim8-201ENSMUST00000026008 Gm9513B3GLJ6 99 aa12.03□□□□□ -0.48
Trim8-201ENSMUST00000026008 Ube2d3P61079 147 aa12.03□□□□□ -0.48
Trim8-201ENSMUST00000026008 Ube2d2P62838 147 aa12.03□□□□□ -0.48
Trim8-201ENSMUST00000026008 Gm11444F6QMA6 170 aa12.02□□□□□ -0.48
Trim8-201ENSMUST00000026008 Defb47Q30KN1 79 aa12.02□□□□□ -0.48
Trim8-201ENSMUST00000026008 Ighv1-63A0A075B5X2 117 aa12.01□□□□□ -0.49
Trim8-201ENSMUST00000026008 Tcrg-C1A0A075B5Z0 172 aa12.01□□□□□ -0.49
Trim8-201ENSMUST00000026008 Cox8cA6H666 72 aa12.01□□□□□ -0.49
Trim8-201ENSMUST00000026008 Gm10490F6VBM2 120 aa12.01□□□□□ -0.49
Trim8-201ENSMUST00000026008 Smr3aQ61900 147 aa12.01□□□□□ -0.49
Trim8-201ENSMUST00000026008 Chd6A3KFM7 2711 aa12.01□□□□□ -0.49
Trim8-201ENSMUST00000026008 Spata45Q9CVW4 97 aa12.01□□□□□ -0.49
Trim8-201ENSMUST00000026008 Mfap4Q9D1H9 257 aa12.01□□□□□ -0.49
Trim8-201ENSMUST00000026008 Reg3gO09049 174 aa12.01□□□□□ -0.49
Trim8-201ENSMUST00000026008 Gm20730A0A075B5J6 119 aa12□□□□□ -0.49
Trim8-201ENSMUST00000026008 Crip2Q9DCT8 208 aaKnown RBP12□□□□□ -0.49
Trim8-201ENSMUST00000026008 Rif1Q6PR54 2419 aaKnown RBP12□□□□□ -0.49
Trim8-201ENSMUST00000026008 Atp5lQ9CPQ8 103 aa12□□□□□ -0.49
Trim8-201ENSMUST00000026008 Morn5Q9DAI9 170 aa12□□□□□ -0.49
Trim8-201ENSMUST00000026008 Ccl24Q9JKC0 119 aa12□□□□□ -0.49
Trim8-201ENSMUST00000026008 A930009A15RikG3UYI6 118 aa11.99□□□□□ -0.49
Trim8-201ENSMUST00000026008 AngP21570 145 aa11.99□□□□□ -0.49
Trim8-201ENSMUST00000026008 A530064D06RikQ8BNV8 229 aa11.99□□□□□ -0.49
Trim8-201ENSMUST00000026008 Cryba4Q9JJV0 196 aa11.99□□□□□ -0.49
Trim8-201ENSMUST00000026008 Myo18bE9PV66 2605 aa11.98□□□□□ -0.49
Trim8-201ENSMUST00000026008 Igkv4-91A0A075B5L2 119 aa11.98□□□□□ -0.49
Trim8-201ENSMUST00000026008 Defb18Q30KP5 85 aa11.98□□□□□ -0.49
Trim8-201ENSMUST00000026008 Rmi2Q3UPE3 149 aa11.98□□□□□ -0.49
Trim8-201ENSMUST00000026008 Samd5Q3V1H9 173 aa11.98□□□□□ -0.49
Trim8-201ENSMUST00000026008 Trav13d-1A0A075B606 110 aa11.98□□□□□ -0.49
Trim8-201ENSMUST00000026008 NpwA0A1L1STR8 176 aa11.98□□□□□ -0.49
Trim8-201ENSMUST00000026008 B230217C12RikE9Q3Z1 139 aa11.98□□□□□ -0.49
Trim8-201ENSMUST00000026008 Gm9913Q8BQQ2 135 aa11.97□□□□□ -0.49
Trim8-201ENSMUST00000026008 4930564D02RikQ9D4S4 103 aa11.97□□□□□ -0.49
Trim8-201ENSMUST00000026008 ColqO35348 457 aa11.97□□□□□ -0.49
Trim8-201ENSMUST00000026008 Fhl2O70433 279 aa11.97□□□□□ -0.49
Trim8-201ENSMUST00000026008 Fam216aQ9DB54 251 aa11.97□□□□□ -0.49
Trim8-201ENSMUST00000026008 Cdip1Q9DB75 208 aa11.96□□□□□ -0.49
Trim8-201ENSMUST00000026008 FlnaQ8BTM8 2647 aaKnown RBP11.96□□□□□ -0.49
Trim8-201ENSMUST00000026008 Cfap126Q6P8X9 189 aa11.96□□□□□ -0.49
Trim8-201ENSMUST00000026008 Ighv5-9-1A0A0A6YVS4 126 aa11.96□□□□□ -0.5
Trim8-201ENSMUST00000026008 Ighv1-5A0A0A6YWG2 117 aa11.96□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 68.6 ms