RNA–Protein interactions for RNA: ENSMUST00000001547.7

Col1a1-201, Transcript of Collagen alpha-1(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a1, Length 5,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1-201ENSMUST00000001547 1700012A03RikQ9DAF1 130 aa10.77□□□□□ -0.68
Col1a1-201ENSMUST00000001547 Prr12E9PYL2 2035 aaKnown RBP10.77□□□□□ -0.68
Col1a1-201ENSMUST00000001547 Klk12B2RVZ0 247 aa10.77□□□□□ -0.68
Col1a1-201ENSMUST00000001547 Ube2aQ9Z255 152 aa10.77□□□□□ -0.68
Col1a1-201ENSMUST00000001547 Ighv12-3A0A075B5T1 117 aa10.77□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Pglyrp1O88593 182 aa10.77□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Vsig4F6TUL9 280 aa10.77□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Iglv1A0A075B663 117 aa10.76□□□□□ -0.69
Col1a1-201ENSMUST00000001547 P01748 117 aa10.76□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Trav13n-2A0A0G2JF93 110 aa10.76□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Camk2n2Q78WH7 79 aa10.76□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Gm21060J3KMU4 56 aa10.75□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Rpl18aP62717 176 aaKnown RBP10.75□□□□□ -0.69
Col1a1-201ENSMUST00000001547 1700074P13RikQ9D9G7 251 aa10.75□□□□□ -0.69
Col1a1-201ENSMUST00000001547 PkdrejQ9Z0T6 2126 aa10.75□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Ighv1-53A0A075B5W3 117 aa10.75□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Igkv1-35A0A0G2JDE5 120 aa10.75□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Cox7b2Q9D2H1 82 aa10.75□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Gm37389A0A0A6YW05 95 aa10.75□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Rpl39P62892 51 aa10.75□□□□□ -0.69
Col1a1-201ENSMUST00000001547 1810032O08RikE9PZV8 113 aa10.74□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Mrpl35Q9CQL6 188 aa10.74□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Trav13d-1A0A075B606 110 aa10.74□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Obox8V9GWY9 217 aa10.74□□□□□ -0.69
Col1a1-201ENSMUST00000001547 SonQ9QX47 2444 aaKnown RBP10.74□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Odf3l1Q810P2 275 aa10.74□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Trav13-1A0A075B644 110 aa10.74□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Trav4-3A0A0B4J1K1 110 aa10.74□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Fam19a4Q7TPG5 135 aa10.73□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Gm12353A2AGJ4 60 aa10.73□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Lce6aD3YV94 81 aa10.73□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Fgf6P21658 208 aa10.73□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Ndufs5Q99LY9 106 aa10.73□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Atp5eP56382 52 aa10.73□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Ighv8-12A0A0G2JDE1 119 aa10.73□□□□□ -0.69
Col1a1-201ENSMUST00000001547 7420426K07RikQ3UX66 186 aa10.73□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Usf3B2RUQ2 2221 aa10.73□□□□□ -0.69
Col1a1-201ENSMUST00000001547 ColqO35348 457 aa10.73□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Atp5g3P56384 141 aa10.73□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Atp5g1Q9CR84 136 aa10.73□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Lmo4P61969 165 aa10.72□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Ep300B2RWS6 2412 aa10.72□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Ormdl1Q921I0 153 aa10.72□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Gm17577J3QNF7 156 aa10.72□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Ebi3O35228 228 aa10.72□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Gata3P23772 443 aa10.72□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Gm26602M0QWA4 95 aa10.72□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Rnase1P00683 149 aa10.72□□□□□ -0.69
Col1a1-201ENSMUST00000001547 P01728 117 aa10.72□□□□□ -0.69
Col1a1-201ENSMUST00000001547 B230359F08RikA0A0B4J1K3 109 aa10.71□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Gm10295Q8CCF3 114 aa10.71□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Tet1Q3URK3 2007 aaKnown RBP10.71□□□□□ -0.69
Col1a1-201ENSMUST00000001547 Trbv16A0A0B4J1H3 115 aa10.71□□□□□ -0.69
Col1a1-201ENSMUST00000001547 CrygcQ61597 174 aa10.71□□□□□ -0.7
Col1a1-201ENSMUST00000001547 P01820 115 aa10.7□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Igkv4-92A0A0B4J1I2 117 aa10.7□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Tmem254aP0DN89 123 aa10.7□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Tmem254bP0DN90 123 aa10.7□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Tmem254cP0DN91 123 aa10.7□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Notch4P31695 1964 aa10.7□□□□□ -0.7
Col1a1-201ENSMUST00000001547 P01674 108 aa10.69□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Igf1P05017 153 aa10.69□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Gm10735Q3US96 136 aa10.69□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Tax1bp3Q9DBG9 124 aa10.69□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Cryba4Q9JJV0 196 aa10.69□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Igkv3-3A0A140T8Q0 119 aa10.69□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Trav13-4-dv7A0A075B6C2 110 aa10.69□□□□□ -0.7
Col1a1-201ENSMUST00000001547 9430069I07RikQ9CX21 111 aa10.69□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Q9CX25 107 aa10.69□□□□□ -0.7
Col1a1-201ENSMUST00000001547 9230102O04RikA2ASX7 82 aa10.69□□□□□ -0.7
Col1a1-201ENSMUST00000001547 P01745 121 aa10.69□□□□□ -0.7
Col1a1-201ENSMUST00000001547 NpyP57774 97 aa10.69□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Sprr3O09116 238 aa10.69□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Gm42674D3YUT9 64 aa10.68□□□□□ -0.7
Col1a1-201ENSMUST00000001547 E130116L18RikQ8BMV6 101 aa10.68□□□□□ -0.7
Col1a1-201ENSMUST00000001547 H2al1aQ5M8Q2 105 aa10.68□□□□□ -0.7
Col1a1-201ENSMUST00000001547 H2al1eQ810S6 105 aa10.68□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Gm5468Q8C3D3 155 aa10.68□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Fer1l4A3KGK3 1992 aa10.67□□□□□ -0.7
Col1a1-201ENSMUST00000001547 F5O88783 2183 aa10.67□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Igkv3-4A0A140T8Q4 119 aa10.67□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Pou2af1Q64693 256 aa10.67□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Ighv1-62-1A0A075B5U3 116 aa10.67□□□□□ -0.7
Col1a1-201ENSMUST00000001547 H2al1bA0A087WP11 105 aa10.67□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Pcsk5Q04592 1877 aa10.66□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Reg3bP35230 175 aa10.66□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Rpl39lQ9CQD0 51 aa10.66□□□□□ -0.7
Col1a1-201ENSMUST00000001547 1700010B08RikQ9DAI7 102 aa10.66□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Tmem223Q9CQE2 199 aaKnown RBP10.66□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Pla2g2dQ9WVF6 144 aa10.66□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Gm9925F6T2U3 160 aa10.65□□□□□ -0.7
Col1a1-201ENSMUST00000001547 4930470P17RikQ9D542 155 aa10.65□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Ncoa6Q9JL19 2067 aa10.65□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Edn2P22389 175 aa10.65□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Psmb11Q8BG41 302 aa10.65□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Pcnx3Q8VI59 2028 aa10.65□□□□□ -0.7
Col1a1-201ENSMUST00000001547 Klk9Q32M27 251 aa10.65□□□□□ -0.7
Col1a1-201ENSMUST00000001547 AgrnA2ASQ1 1950 aa10.65□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Gm10542F6XDR3 90 aa10.65□□□□□ -0.71
Col1a1-201ENSMUST00000001547 Ramp1Q9WTJ5 148 aa10.65□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 68.2 ms