RNA–Protein interactions for RNA: ENSMUST00000112070.7

Col7a1-202, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col7a1, Length 9,250 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-202ENSMUST00000112070 Ndufs5Q99LY9 106 aa11.16□□□□□ -0.62
Col7a1-202ENSMUST00000112070 Tmem223Q9CQE2 199 aaKnown RBP11.16□□□□□ -0.62
Col7a1-202ENSMUST00000112070 Cysrt1Q9D1E4 142 aa11.16□□□□□ -0.62
Col7a1-202ENSMUST00000112070 Gm10881P01642 115 aa11.15□□□□□ -0.62
Col7a1-202ENSMUST00000112070 PpbpQ9EQI5 113 aa11.15□□□□□ -0.62
Col7a1-202ENSMUST00000112070 P01788 123 aa11.15□□□□□ -0.62
Col7a1-202ENSMUST00000112070 Obox8V9GWY9 217 aa11.15□□□□□ -0.62
Col7a1-202ENSMUST00000112070 Ighv5-8A0A075B676 92 aa11.15□□□□□ -0.62
Col7a1-202ENSMUST00000112070 P18528 98 aa11.15□□□□□ -0.62
Col7a1-202ENSMUST00000112070 Foxi2Q3I5G5 311 aa11.15□□□□□ -0.62
Col7a1-202ENSMUST00000112070 Reg3gO09049 174 aa11.15□□□□□ -0.62
Col7a1-202ENSMUST00000112070 Defb47Q30KN1 79 aa11.15□□□□□ -0.62
Col7a1-202ENSMUST00000112070 Ang3P97802 145 aa11.15□□□□□ -0.62
Col7a1-202ENSMUST00000112070 D930007J09RikQ9D2K6 131 aa11.15□□□□□ -0.62
Col7a1-202ENSMUST00000112070 Tpsg1Q9QUL7 311 aa11.15□□□□□ -0.62
Col7a1-202ENSMUST00000112070 Inafm1E9PV59 130 aa11.14□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Gm10735Q3US96 136 aa11.14□□□□□ -0.63
Col7a1-202ENSMUST00000112070 P01790 122 aa11.14□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Pom121l2Q5SW25 972 aa11.14□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Ighv1-4A0A075B5T4 117 aa11.14□□□□□ -0.63
Col7a1-202ENSMUST00000112070 PifoQ9D9W1 207 aa11.14□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Igkv2-137A0A0B4J1H6 120 aa11.13□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Colca2F8VPY8 239 aa11.13□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Zmat4Q8BZ94 229 aa11.13□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Tmem210Q9D2F0 147 aa11.13□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Klk13Q8CGR6 276 aa11.13□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Ighv1-74A0A0G2JGK2 117 aa11.12□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Nop10Q9CQS2 64 aa11.12□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Atp23Q9CWQ3 201 aa11.12□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Gm26602M0QWA4 95 aa11.12□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Igkv9-123A0A140T8N8 117 aa11.12□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Tcl1b3P56842 122 aa11.12□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Ighv8-8A0A0A6YXQ0 119 aa11.12□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Ccl21aP84444 133 aa11.12□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Ccl21bP86792 133 aa11.12□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Ccl21cP86793 133 aa11.12□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Prr3Q811B5 190 aaKnown RBP11.12□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Gm11733Q8BQP1 125 aa11.11□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Q8K1L6 76 aa11.11□□□□□ -0.63
Col7a1-202ENSMUST00000112070 1700012A03RikQ9DAF1 130 aa11.11□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Defb26Q30KN7 186 aa11.11□□□□□ -0.63
Col7a1-202ENSMUST00000112070 1500011B03RikQ3TTH7 73 aa11.11□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Igkv5-37A0A140T8N4 115 aa11.11□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Atox1O08997 68 aaKnown RBP11.11□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Gm10337F7DEP7 55 aa11.11□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Igkv3-4A0A140T8Q4 119 aa11.1□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Trbv16A0A0B4J1H3 115 aa11.1□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Tnfrsf23Q9ER63 176 aa11.1□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Gm20730A0A075B5J6 119 aa11.1□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Ighv8-4A0A0A6YW26 117 aa11.1□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Fxyd5P97808 178 aa11.1□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Gm10518F6UQQ9 182 aa11.1□□□□□ -0.63
Col7a1-202ENSMUST00000112070 P01745 121 aa11.1□□□□□ -0.63
Col7a1-202ENSMUST00000112070 PrcdQ00LT2 53 aa11.1□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Igkv3-10A0A0G2JGN0 119 aa11.1□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Trav7-6A0A075B640 112 aa11.09□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Ramp1Q9WTJ5 148 aa11.09□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Lyg1Q9D7Q0 197 aa11.09□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Ighv6-7A0A0A6YWU3 119 aa11.09□□□□□ -0.63
Col7a1-202ENSMUST00000112070 LoxP28301 411 aa11.09□□□□□ -0.63
Col7a1-202ENSMUST00000112070 Gm44973A0A140LJJ1 189 aa11.09□□□□□ -0.63
Col7a1-202ENSMUST00000112070 P01794 123 aa11.08□□□□□ -0.64
Col7a1-202ENSMUST00000112070 Tfpi2O35536 230 aa11.08□□□□□ -0.64
Col7a1-202ENSMUST00000112070 Defb3Q9WTL0 63 aa11.08□□□□□ -0.64
Col7a1-202ENSMUST00000112070 Odf1Q61999 247 aa11.08□□□□□ -0.64
Col7a1-202ENSMUST00000112070 Camk2n2Q78WH7 79 aa11.08□□□□□ -0.64
Col7a1-202ENSMUST00000112070 4930470P17RikQ9D542 155 aa11.08□□□□□ -0.64
Col7a1-202ENSMUST00000112070 CrygdP04342 174 aa11.07□□□□□ -0.64
Col7a1-202ENSMUST00000112070 Igf1P05017 153 aa11.07□□□□□ -0.64
Col7a1-202ENSMUST00000112070 NpyP57774 97 aa11.07□□□□□ -0.64
Col7a1-202ENSMUST00000112070 Ighv1-77A0A0G2JGS9 117 aa11.07□□□□□ -0.64
Col7a1-202ENSMUST00000112070 CenpwQ3URR0 86 aa11.07□□□□□ -0.64
Col7a1-202ENSMUST00000112070 Ighv1-52A0A0A6YXC3 117 aa11.06□□□□□ -0.64
Col7a1-202ENSMUST00000112070 Iglc1A0A0G2JE99 106 aa11.06□□□□□ -0.64
Col7a1-202ENSMUST00000112070 P01843 105 aa11.06□□□□□ -0.64
Col7a1-202ENSMUST00000112070 Gm3618D3Z4P5 127 aa11.06□□□□□ -0.64
Col7a1-202ENSMUST00000112070 Gm37988J3QM41 62 aa11.06□□□□□ -0.64
Col7a1-202ENSMUST00000112070 P01729 129 aa11.06□□□□□ -0.64
Col7a1-202ENSMUST00000112070 Edn2P22389 175 aa11.06□□□□□ -0.64
Col7a1-202ENSMUST00000112070 Trbv14A0A140T8L9 115 aa11.05□□□□□ -0.64
Col7a1-202ENSMUST00000112070 7420426K07RikQ3UX66 186 aa11.05□□□□□ -0.64
Col7a1-202ENSMUST00000112070 Igkv6-15A0A140T8M5 115 aa11.05□□□□□ -0.64
Col7a1-202ENSMUST00000112070 Hoxb4P10284 250 aa11.05□□□□□ -0.64
Col7a1-202ENSMUST00000112070 Lrrk2Q5S006 2527 aa11.05□□□□□ -0.64
Col7a1-202ENSMUST00000112070 P01630 113 aa11.05□□□□□ -0.64
Col7a1-202ENSMUST00000112070 Cela2aP05208 271 aa11.05□□□□□ -0.64
Col7a1-202ENSMUST00000112070 Rpl18aP62717 176 aaKnown RBP11.05□□□□□ -0.64
Col7a1-202ENSMUST00000112070 Flg2Q2VIS4 2362 aa11.04□□□□□ -0.64
Col7a1-202ENSMUST00000112070 Trav12d-3A0A075B6A4 115 aa11.04□□□□□ -0.64
Col7a1-202ENSMUST00000112070 Gm9513B3GLJ6 99 aa11.04□□□□□ -0.64
Col7a1-202ENSMUST00000112070 P01792 123 aa11.04□□□□□ -0.64
Col7a1-202ENSMUST00000112070 P01793 123 aa11.04□□□□□ -0.64
Col7a1-202ENSMUST00000112070 AmelxP63277 210 aa11.04□□□□□ -0.64
Col7a1-202ENSMUST00000112070 Gm10384Q3UQ87 92 aa11.04□□□□□ -0.64
Col7a1-202ENSMUST00000112070 H2al1mQ9DAD9 105 aa11.04□□□□□ -0.64
Col7a1-202ENSMUST00000112070 Ly6gP35461 111 aa11.04□□□□□ -0.64
Col7a1-202ENSMUST00000112070 4933414I15RikQ9D4D5 133 aa11.04□□□□□ -0.64
Col7a1-202ENSMUST00000112070 Mrps12O35680 139 aa11.04□□□□□ -0.64
Col7a1-202ENSMUST00000112070 Col4a3Q9QZS0 1669 aa11.04□□□□□ -0.64
Col7a1-202ENSMUST00000112070 Gm6040Q4QY32 63 aa11.04□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 104.1 ms